Actinoplanes sichuanensis: Q0Z83_053140 Help Entry Q0Z83_053140      CDS       T09497                                  Symbol ligA_1 Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism asic  Actinoplanes sichuanensis Pathway asic03030   DNA replication asic03410   Base excision repair asic03420   Nucleotide excision repair asic03430   Mismatch repair Brite KEGG Orthology (KO) [BR:asic00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Q0Z83_053140 (ligA_1)    03410 Base excision repair     Q0Z83_053140 (ligA_1)    03420 Nucleotide excision repair     Q0Z83_053140 (ligA_1)    03430 Mismatch repair     Q0Z83_053140 (ligA_1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:asic03032]     Q0Z83_053140 (ligA_1)    03400 DNA repair and recombination proteins [BR:asic03400]     Q0Z83_053140 (ligA_1) Enzymes [BR:asic01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Q0Z83_053140 (ligA_1) DNA replication proteins [BR:asic03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Q0Z83_053140 (ligA_1) DNA repair and recombination proteins [BR:asic03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Q0Z83_053140 (ligA_1)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Q0Z83_053140 (ligA_1)    MMR (mismatch excision repair)     DNA ligase      Q0Z83_053140 (ligA_1)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Q0Z83_053140 (ligA_1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase BRCT HHH_2 PTCB-BRCT BRCT_2 Nlig-Ia Motif Other DBs NCBI-ProteinID:  BEL07123 LinkDB All DBs Position complement(5691077..5693023) Genome browser AA seq 648 aa AA seqDB search MELARGAAQAYYDTGDAVMTDAEYDELADRIAASVAEHPAWDDRGITTAVAAGASAGGDV RHPTAMLSLDKIKTPEEVAEFVATLGGDGCLVEVKLDGLAIRAEFVDGRLVLAALRGDGA TGEDVTAQVRRGVAGLPAELGTSWSGEVRGEVYMTVDDFEAASANRVAAGGKAFVNSRGA VAGAIRSIDRAYEAPMTFATYEITGDGVDPAGTHLGRMDRAEELGFPAACRLIPEVAGEC FTAEQVNAAIEVIGGRRASLVFPIDGAVIKANAEATRRRLGLASRTPYWAVAFKYPPDTA STYLRDIEVRVGRTGRISLRAIIDPVVVGGTTVTKATLHNPQWVAEQGLALGQKVAVWRA GDVIPRVTSPIGDQPHGLTPWVAPELCPQCGEAWDKSSLLWRCHTASCAAANALAYWCSR EALDVDGAGDSFCDAVIEAGLARNVADLYALSVDDIAELPVGKTVAGGTVMLGRSNAERI VAGLAASKQQPFNRVVTGLGIRMTGRSVGRWLAARFKSMSALRAASVEEIAEIDKMGLIK AQHVVDGLVAMGDVIDRLAEFGLTMEVVDDGGAKPLSGQTYVVSGSVPGYTRTTVSERIE ALGGSASSSVSAKTTALVTSETTTSKAKKAAQLGIPVIEPEEFARMLA NT seq 1947 nt NT seq  +upstreamnt  +downstreamnt gtggagctggcgcgcggcgccgcccaggcgtattacgacaccggtgacgcggtgatgacc gacgcggaatatgacgagttggccgaccggatcgcggcgtcggtggccgagcacccggcg tgggacgaccgtggcatcaccaccgcagtggccgcgggggcctctgcgggcggcgacgtg cggcatccgacggcgatgctctccctcgacaagatcaagacgccggaggaggtcgccgag ttcgtcgccaccctcggcggtgacggctgcctggtcgaggtcaagctcgacggcctcgcc atccgcgccgagttcgtcgacggcaggctggtgttggccgcgctgcgcggcgacggtgcc accggtgaggatgtgaccgcacaggtgcggcggggcgtcgccgggttgccggccgagctg ggcacgtcctggagcggcgaggtgcgcggcgaggtctacatgaccgtcgacgacttcgag gcggccagcgccaaccgggtcgccgccgggggtaaggcgttcgtcaactcacggggcgcg gtcgccggggcgattcgcagcatcgatcgggcctatgaggcgccgatgaccttcgccacc tatgagatcaccggtgacggggtggatccggccggcacccacctcgggcggatggatcgg gccgaggagctgggctttccggccgcctgtcggctgattcccgaggtcgccggggagtgc ttcaccgctgagcaggtcaacgccgccatcgaagtgatcggcgggcggcgggcctccctg gtgttcccgatcgacggtgcggtcatcaaggccaacgccgaggccacccgccgtcggctg gggctggccagccgcactccctattgggcggtcgccttcaaatatccgccggacaccgcg tccacctacctgcgtgacatcgaggttcgggtcgggcggaccgggcggatcagcctgcgt gccatcatcgacccggtcgtcgtcggtggcaccaccgtcaccaaggccaccctgcacaac ccgcagtgggttgccgagcagggtctcgccctcgggcagaaggtcgcggtgtggcgggcc ggtgacgtcatcccccgagtgacctcgcccatcggtgatcagccacatggcctcaccccc tgggtcgcgcctgagctgtgcccgcagtgcggtgaggcgtgggacaagtcgagtctgctc tggcggtgtcacacggcctcgtgcgcggcggcgaacgctctggcctactggtgcagccgg gaagccctcgacgtcgacggggccggggattcgttctgtgacgcggtcatcgaggccggg ctggcccgcaatgtcgccgacctctacgcgttgagcgtcgacgacatcgctgagctgccg gtggggaagaccgtcgccggtggcacggtgatgctcgggcgatccaacgccgagcggatc gtcgccgggctggcggccagcaagcagcagccgttcaaccgggtcgtcaccggtctgggc atccggatgaccggccgtagtgtcgggcggtggctggcggcccgcttcaagtcgatgtcc gctttgcgggcggcctccgtcgaggagatcgccgagatcgacaagatggggttgatcaaa gcccagcatgtcgtcgacgggctggtcgccatgggcgatgtgatcgatcgtctcgccgag ttcggcctgaccatggaggtggtcgacgacggcggtgccaaaccgctgtcggggcagacc tatgtggtgtcgggttcggtgcccggctacacccggaccacggtcagcgaacggatcgag gcgctcggcggctcggccagcagcagtgtctcggccaagaccacggctctcgtcacgtcg gagacgactaccagcaaggccaagaaggcggctcagctcggcattcctgtgatcgagccc gaggagttcgcccgcatgctcgcctga

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