Aquicella siphonis: AQUSIP_15350
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Entry
AQUSIP_15350 CDS
T06267
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
asip
Aquicella siphonis
Pathway
asip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AQUSIP_15350 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asip03400
]
AQUSIP_15350 (nth)
Enzymes [BR:
asip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AQUSIP_15350 (nth)
DNA repair and recombination proteins [BR:
asip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AQUSIP_15350 (nth)
Prokaryotic type
AQUSIP_15350 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_8
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VVC76229
UniProt:
A0A5E4PGX7
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All DBs
Position
1:1611204..1611851
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AA seq
215 aa
AA seq
DB search
MHNKTIREIFQRFRAANPKPTTELVYHNHFELLVAVILSAQATDKSVNKATTALFRTANT
PEKMLQLDERGLKTYIKTIGLYTSKAKNIIATCKILIENYGSKVPRRREDLESLPGVGRK
TANVVLNTCFGEPVIAVDTHIFRVANRIGLAKGKTPLEVEKQLLKNIPDEFKHDAHHWLI
LHGRYVCIARKPKCPECLIRDLCEYKDKTPPEQLT
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcacaataaaacaatacgtgaaatttttcagcggtttcgcgcggccaatcccaaaccc
accacggaactggtttatcataatcacttcgaattgctggtcgcggtcattttatccgcg
caagcgactgataaatcagttaacaaggcaacaacagccctgtttcggacagcaaacaca
ccggaaaaaatgctgcagctggatgaacgaggattaaaaacatatatcaaaaccataggc
ctttacacttccaaggcaaagaatattatagccacctgcaaaattctgatagagaattat
ggatcaaaagttcccagacgccgcgaagatctggaatccctgcctggcgtggggcggaaa
accgcgaatgtggttttaaacacttgttttggcgaacctgtgatcgcagtggatacccat
atattccgggttgccaatcgcatcggcttggcgaaaggaaaaacaccgctggaagttgaa
aagcagctgctcaagaacataccggatgaattcaagcatgatgctcatcactggctgata
ttgcacggccgttatgtctgcattgcgcgtaaacccaaatgccccgaatgccttatccgg
gatttatgtgaatataaagacaagacaccgcctgaacaattaacgtag
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