Actinomyces slackii: NCTC11923_00196
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Entry
NCTC11923_00196 CDS
T06783
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
asla
Actinomyces slackii
Brite
KEGG Orthology (KO) [BR:
asla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asla03009
]
NCTC11923_00196 (rlmC)
Enzymes [BR:
asla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NCTC11923_00196 (rlmC)
Ribosome biogenesis [BR:
asla03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC11923_00196 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_12
MTS
Methyltransf_11
Methyltransf_15
TPMT
TRM5-TYW2_MTfase
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
VEG73587
UniProt:
A0A3S4U0N4
LinkDB
All DBs
Position
1:228425..229648
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AA seq
407 aa
AA seq
DB search
MSAIATSPSSLCSLHSSGACGSCPHLDAPYTAQLIDKQERVARLLAAHVPRGAWAAPQAS
APTGFRNKAKMVVAGTTARPTLGILDATGAGVDLTDCPLHVPPIRAALPVLADLIRDRGI
APYDVPTRQGELKHILVTASPDEDLMVRFVLRSRHHVEDLRAALPRLREALPQLAVLSAN
IQGVHQAIIEGDEEIVLSQEDRLLMRLPLADGRGRDWGNGDGGAEELPLLLPTRSFFQTN
TAVAASLYATARHWAQGLSPGTVWDLFCGVGGFALALAAPGRRVLGVEASAPAIAGARQA
AALMGLGPQEVRFEAGDARVLDPGAQGPDLLVVNPPRRGIGAELAGRIEASRATGVLYSS
CNPVTLAADLERMPSLGVARARLFDMFPHTDHAEVLVELARRWPSRS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgatcgccacctcgccgtcgtccctctgctccctgcacagcagcggggcctgc
ggctcctgcccccatctggatgccccgtacacggctcagctgatcgacaagcaggagcgg
gtcgcgcgcctgctggccgcccacgtgccgcggggagcctgggccgcgccccaggccagc
gcgcccaccggctttcgcaacaaggccaagatggtggtggccggcaccaccgcgcgcccg
accctggggatccttgacgccacgggggcgggggtcgatctgacggactgccccctgcat
gtcccgcccatcagggccgcgctgcccgtgctggccgacctgatccgcgaccgcggcatc
gccccctatgacgtgcccacgcgccagggagagctcaagcacatcctggtcaccgcctca
cccgacgaggacctcatggtccgattcgtgctgcgctcgcgccatcatgtggaggacctg
cgcgccgccctgccgcgcctgcgcgaggccctgccccagctggcagtgctcagcgccaat
atccagggcgtccaccaggcgatcatcgagggcgatgaggagatcgtgctcagccaggag
gaccggcttctcatgcgcctgccccttgcggacgggcggggccgcgactggggcaacggt
gacggcggggcagaggagctgcccctcctgctgcccacgcgctcgttcttccagaccaac
acggcggtggccgcatccctgtacgccaccgcccgccactgggcgcaggggctgagcccg
ggcaccgtgtgggacctgttctgcggggtgggcggcttcgccctggccctggccgccccg
gggcggcgcgtcctgggagtggaggcctccgcaccggccatcgccggggcgcgacaggcg
gcggcactcatgggcctggggccgcaggaggtgcgcttcgaggcgggcgatgcccgcgtc
ctggaccccggcgcccagggccccgacctgctcgtggtcaacccgccccggcgagggatc
ggggcggagctggcagggcgcatcgaggccagccgggccacgggagtcctgtactcctca
tgcaaccctgtgaccctggcggcggatctggagcgcatgccctccctgggcgtcgcgcgc
gcccgcctgttcgacatgttcccccacaccgatcatgccgaggtgctcgtcgagctggcc
cgccgttggccctcccggtcgtga
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