Alligator sinensis (Chinese alligator): 102368234
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Entry
102368234 CDS
T02922
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04010
MAPK signaling pathway
asn04120
Ubiquitin mediated proteolysis
asn04140
Autophagy - animal
asn04144
Endocytosis
asn04620
Toll-like receptor signaling pathway
asn04621
NOD-like receptor signaling pathway
asn04622
RIG-I-like receptor signaling pathway
asn05132
Salmonella infection
asn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102368234 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102368234 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102368234 (TRAF6)
04140 Autophagy - animal
102368234 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102368234 (TRAF6)
04621 NOD-like receptor signaling pathway
102368234 (TRAF6)
04622 RIG-I-like receptor signaling pathway
102368234 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102368234 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
102368234 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asn04131
]
102368234 (TRAF6)
04121 Ubiquitin system [BR:
asn04121
]
102368234 (TRAF6)
Enzymes [BR:
asn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102368234 (TRAF6)
Membrane trafficking [BR:
asn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
102368234 (TRAF6)
Ubiquitin system [BR:
asn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
102368234 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF6_Z2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
Med21
RING_XB3-XBAT31
TRAF3_RING
SlyX
PspA_IM30
zf-RING_11
Sina_ZnF
U-box
ATG16
UPF0242
DUF16
Motif
Other DBs
NCBI-GeneID:
102368234
NCBI-ProteinID:
XP_006014704
UniProt:
A0A1U7RAW4
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSLLQSDNSCGARELESGCCAAMASACSAGAKEDSASVSSGTGNAPNSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVRCPNKGCRLKMELRHIEEHQLQCNFSCVECPQCLGFFQKNQMKEHMTQ
ECPRRQVCCPNCATSMAYEDKEHHEQHCPLANVFCEYCNTMLIRQQMPNHYDNDCPTAPV
PCTYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQTLRSISMTATVPVSFSNGPSFEPAL
FSHPSSSPYECNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQSINMVELKRTIRNL
EGKIAEMEAQQCNGIYIWKIENFSSLLKAQEEERPVVTHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSYLPWPFQGTIRLSILDQSEGPERLNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQALKQRTFVKDDTLLVRCEVVTRLDFNSLRREGFQPRS
TDGVV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctacaaagtgataacagctgtggagccagagaactggagagtggctgctgt
gcagccatggccagcgcatgcagcgctggagcaaaagaagacagtgcaagtgtcagcagt
gggactggaaatgcaccaaattccttcacggaagagacccagggatatgatgtagagttc
gatccgcccctggaaagtaaatacgagtgtcctatctgtttgatggctcttcgggaagca
gtgcagacaccatgcggacaccgcttttgcaaaggctgcattgtcaaatcaataagagat
gcaggtcacaaatgtccagtagacaatgaaattctacttgaaaatcaacttttccctgac
aactttgccaagagggaaatcctctcgctaacagtgagatgtcccaacaaagggtgccgt
ttgaagatggagctgagacatatagaggagcatcagttacagtgcaacttttcatgtgtg
gaatgcccacagtgcctgggcttcttccagaagaatcagatgaaagagcacatgacacag
gaatgtccacggcggcaagtctgctgtcccaactgtgccacatctatggcttatgaagat
aaagagcaccacgaacagcactgtccactggcaaatgtgttttgtgaatattgtaatact
atgcttattagacaacagatgcctaatcattatgataatgactgtcctacagccccagtc
ccgtgtacttacagtgcctttggatgtcctgaaaagatgcagagaaatgaattggcacgc
cacatgcaggaatttactcaggttcacatgagaatgatggctcagactctccgaagtatc
agtatgactgccacagttcctgtatccttctccaatggcccatcctttgagccagccctt
ttctcccacccttcatcttctccatatgagtgcaacccggaagtagagaacttcaaggag
accattcagcagttggaaggtcgcttggtaagacaagatcaccaaatcagagagctgatt
gctaaaatggaaactcagagtattaacatggttgagctcaaacgtactatccgaaaccta
gaggggaaaattgctgaaatggaggcacagcaatgtaatggcatttatatctggaagatt
gagaatttctcttcacttctgaaagcccaagaagaagaaaggcctgttgtgacacacagc
cctggcttctacactggaaaacctggctacaaactgtgtttgcgtctgcatatccagtta
ccaaatgctcagcgttgtgcaaactttatatccctttttgtccatactatgcaaggggaa
tacgacagctatctgccttggccattccagggcaccatacggctttctattctggatcaa
tcagaaggacctgaaaggctgaatcatgaagaagtaatggaagccaaacctgagctgcta
gccttccagagaccaacaatccaccgcaacccaaagggttttggttacgtgactttcatg
cacctgcaagctctgaaacaaagaacctttgtaaaagatgatacccttcttgtgcgctgt
gaagttgtaactcgattagattttaacagtctccggagggagggatttcagcctcgtagt
actgatggtgtggtgtag
DBGET
integrated database retrieval system
