Alligator sinensis (Chinese alligator): 102369036
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Entry
102369036 CDS
T02922
Symbol
BRCA1
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03440
Homologous recombination
asn03460
Fanconi anemia pathway
asn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102369036 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
102369036 (BRCA1)
03460 Fanconi anemia pathway
102369036 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asn01009
]
102369036 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asn04121
]
102369036 (BRCA1)
03036 Chromosome and associated proteins [BR:
asn03036
]
102369036 (BRCA1)
03400 DNA repair and recombination proteins [BR:
asn03400
]
102369036 (BRCA1)
Enzymes [BR:
asn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102369036 (BRCA1)
Protein phosphatases and associated proteins [BR:
asn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102369036 (BRCA1)
Ubiquitin system [BR:
asn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102369036 (BRCA1)
Multi subunit type E3
BRCC complex
102369036 (BRCA1)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102369036 (BRCA1)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102369036 (BRCA1)
BRCA1-A complex
102369036 (BRCA1)
BRCA1-B complex
102369036 (BRCA1)
BRCA1-C complex
102369036 (BRCA1)
BRCA complex
102369036 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
102369036 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
BRCT_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-Nse
BRCT_3
zf-RING_6
zf-RING_10
zf-MIZ
Prok-RING_4
zf-ANAPC11
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
102369036
NCBI-ProteinID:
XP_025056548
UniProt:
A0A3Q0GEI8
LinkDB
All DBs
Position
Unknown
AA seq
1877 aa
AA seq
DB search
MDFSVVALGDVQNVLSAMQKNLECPICLEVIKEPVSTKCDHIFCRLCMFKLLSKKKKSLV
QCPLCKTEVTKRSLQENSRFKQLIEGLLKTIHAFELDAGVKFLNHQDFSKKPIETNSADT
LRKESCVIQSKGYRNRQKKVKENGQENLTLQGTITGVQLSGDMVKWSSPRNKRRKLESDK
IMYIEFGSDSSEDLFKKAGGSRVQDKEMFQTPPEKLEEELKYAENESPHNMQVINLGGRE
ILLSDFRGEFDFSEEGLGSSEDIQNISEDFQAAQVNLAEEHLKNNLCISASNVHAEPCDR
TANATSPQKKDSSLFSSAEEMSSVGAPCISKSEEPGSQHSPKSQLNKNKETSSAVQHVKT
SETCEQKCDSLHEDISSLEQLLQPEAMPIDTLSQVSKKRLKKSIQKVNDWFSKSSEVLSC
SPQDAGAVDIEEEGSCLSDRDSSISGKTDITVNCLEVAVECENEKSLSKPSVHSIENKIF
GKTYQRDRKSNRHVNLGVVPQNTEVEDVTSDVQHLDNSRNDRLKRKRKTVCGLQPGDFIK
KRDAKVVDEHDCLVPARGKAGEDSSVVGGDPVCEKKRENTSAELPLEKGEFIFKNDVEKV
IGDCTDGEPELKDCDQRNAKKRCSSLMERNRHSARTKHTLQLVVNRNSSYLHQTELQIDS
YPSSEESKKVDSEQRQVRRSRRLQLLTGEMTKETRRRDEPYETSRRQADKNDSFSSGFQR
TVLVHAPKCKDQAELQDILNHRVPLSDYNLKGTNLEANKVHASPETSFTIMEIEKDSSNP
PLLQLQEANACSLLASADAQDSHSLLQPCSTNVEQTAGPVLNSSETKQCTATEPNKSKLH
ACSPKDNGCYTRYDPESFKNQKMTEAKSILELNTETEDSELDVQYLRNMFRHTKRLSFTL
HSGLVKESAIENTASEAEEKMSTNQIEYRYNSRDLKNDPMHLKKPSVGLTGVDERESKTC
QTAKDVSGNDTECRHIREHGANASQVQSQEQLLSSARLFGAKIKDKSRLQKRKQPAEKTV
SSKLVRESELNLDLNQYNRSLSDRNNTEEPIFQGTGLSVINETGSSSESNQAEKTEVAEN
KQPVLNVQPESMLNCLAVCXXXXXKCSEGEGKQVKSDKEQINQVANIGVPECLISEEALE
HPIEDTSGFPALSETPDDLVFSAEDLKGNNSFCDADRKDISAVFVKADENALVRGINSDS
SSSKSRSQSFVQRSRRVVQKLQSSEEDSNEDEDLPCFQALIFGKSSSTHTQSQKQKMSVR
RCSNPSAQMLALQSSSSGSDKVVQKMPEATLKEVCVSPSQESECSVNLFSSQSNMSEDSA
NRPEDLRLVPSTKEKKNFSEGKEASPHENEELKGRKNSLQDEHQGDPNLESNIGEPSGYD
SEASHLGDSYGLSSQREILTTQQKNDMQNNLKKLQQXXXXXXXXXXXLEAVLEQHGSQGS
ELPCSSVEGATATGLMITARGAMLTSEADLDNHKICSSVGLPRDEFHGMPNHCFNSNSKG
LEEERSSSSLLSTSKSHLLNKEAWQHSFSKTLALEPNTPSQEGKSQQGDAALLLVQKAEE
QCNQYRKEPENATEQKSETKLNSAAILSSPCGNMSRIPNSSPLKFLKRLSHSQTAEATNG
SAIPCNIDDRKNTRGCELERRVFASAHVPHHRAGKENAKSPVVLSRKKMSIVASGLNQHE
FLLVQKFARKTQSTLSNQITEGTTHVIMKTDMDLVCERTLKYFLGIAGRKWVVSYQWVIQ
SFKERRILYESDFEVRGDVINGRNHQGPKRARQSQAGKLFKDFEICCYGPFMDMNTENLE
WMVELCGASVVTQLHLFTHKAKHTAVVIVQPDAWVEETGYRAIQQKCSATVVTREWVLDS
VACYERQEFDAYLVSQE
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggacttctctgtggttgctcttggagatgtgcaaaacgtactttcagctatgcagaag
aatttggaatgccccatatgtttggaagtgataaaagagccagtctcaacaaaatgtgac
cacatattctgcagactatgtatgtttaaacttctcagcaaaaagaaaaaaagtctggta
cagtgtccactgtgtaaaactgaagttaccaaaagaagtctgcaggaaaattccagattt
aagcaactaattgaaggactgttgaaaactatccatgcttttgaacttgacgctggagtg
aaatttttaaaccatcaggatttttctaaaaaacccatagaaaccaattctgctgacacc
ctccgtaaagaaagttgtgtcatccaaagtaagggctacagaaacagacaaaaaaaagtt
aaagaaaatggacaagaaaatcttaccctgcagggaactatcactggtgtacagctttca
ggcgacatggttaagtggagttccccaagaaacaaaaggagaaaactggaatctgataaa
ataatgtacattgaatttggttctgattcttctgaagatctctttaaaaaggcaggtggt
agcagggttcaagacaaagaaatgtttcagactccacctgaaaagcttgaagaagaactg
aagtatgctgagaatgaaagtccacacaacatgcaagttatcaacctaggtggaagagaa
atacttctttcagacttcagaggtgaatttgatttctcagaggaaggcttaggaagcagt
gaagacattcaaaatatcagtgaagacttccaagctgctcaagtgaatttggctgaagag
catttaaagaataatctctgcatttctgcctcaaacgtgcatgcagagccatgtgacaga
acagccaatgctacatctccacagaaaaaggacagtagtttattcagcagtgcagaagaa
atgagttcagtgggagctccgtgcatcagtaaaagtgaagagcctggttcacagcacagc
cctaaaagccaattgaataaaaacaaggaaacaagtagtgctgtacagcatgtaaaaact
tctgaaacatgtgaacaaaagtgtgactccttacatgaagacatttcttctctggagcag
ttactgcagcctgaagctatgcccattgatactttgagccaagtttccaagaaaagactg
aagaaaagcattcaaaaagtcaatgattggttttcaaaaagcagtgaagtgctctcttgt
tcccctcaggatgctggggcagttgacatagaagaggaaggttcatgtttgtcagacaga
gattcctctatttcggggaagactgacataacggtaaactgcttggaagttgcagtggaa
tgtgaaaatgaaaagagtttgtcaaaacccagtgtgcatagcattgaaaataaaatattt
gggaaaacttatcagagagatagaaagtcaaatcggcatgttaatcttggagtagtaccc
cagaatacagaagtggaagatgttacttctgatgtgcagcacttggataattccagaaat
gacagattaaagcgaaaaagaaagactgtctgtggtctgcaacctggagacttcatcaag
aaaagagatgcaaaggttgtagatgagcatgattgccttgttcctgcgaggggaaaagct
ggtgaagattcttctgttgttgggggagatccagtttgtgagaagaaaagggaaaatacc
tcagcagaacttcctctcgagaaaggagaattcatctttaaaaatgatgttgagaaggta
attggtgactgcactgatggagagccagaattaaaggactgtgaccaaaggaatgctaaa
aaaagatgtagctctctaatggagagaaacagacattcagccagaaccaagcatactcta
cagctggtagtgaacagaaactcaagttatcttcatcagactgagctgcagattgatagc
tacccaagtagtgaagaatcaaaaaaagttgattctgaacagagacaagttaggcgcagc
agaaggcttcagttactgactggggaaatgacaaaagaaaccaggagaagagatgagcca
tatgaaacatcaagaaggcaagccgataaaaatgatagtttttcttctggattccagaga
actgtcttggtccatgcccctaaatgcaaagaccaggctgaactgcaggatatattgaac
catagggtacctttgtcagactataatttgaaaggtactaaccttgaagcaaacaaggta
cacgctagtcctgaaacctcttttaccattatggaaattgaaaaagattcctcaaatccc
ccactactacaacttcaggaagcaaatgcttgttctctgttggccagtgcagacgctcaa
gacagccattcactcctgcagccatgttccacgaatgttgagcaaactgctggcccagta
ctaaattcatctgaaactaagcagtgcacagctacagaacccaacaagagcaagttacat
gcttgttcacccaaggataatggatgttatacaagatatgatccagaaagcttcaaaaac
caaaagatgactgaagcgaaaagcattttagagttgaacacagaaactgaagatagtgag
ttagatgtacaatacctccgtaatatgtttagacatacaaaacgattgtcatttactctt
cattctggtctagtgaaggaatctgcaatagaaaacactgcttctgaagctgaagagaag
atgagtaccaaccagatagaatacagatataacagcagagatttaaaaaatgatcctatg
catttaaaaaaaccatctgtaggtctgactggagtcgatgagagagagtctaaaacctgc
caaacagctaaagatgtctctggaaatgatactgaatgcagacacattagggagcatggt
gcaaatgcttcacaagtacaaagtcaagaacaacttttgtcttcagcgaggttatttggt
gccaaaattaaagataagagcagactgcaaaaaagaaaacagccagctgaaaagacagtg
tcctccaaactagtgagagaaagtgagttaaatttggacctaaaccaatataatagaagt
ctaagtgatcggaataatacagaagagcccattttccaaggaactggtttaagcgtaatt
aacgaaacaggctccagttcagaaagcaatcaagcagaaaaaactgaagtagctgaaaac
aaacagccagtattaaatgttcagcctgaatctatgctgaattgtctagcagtttgtnct
nnnnnnnnnnagaaatgtagtgagggggaaggcaaacaagtaaagagtgataaagaacaa
ataaaccaagttgccaacataggtgtacctgagtgtttaatttcagaagaggctctggag
catcccattgaggacaccagtggttttccagcactgtctgagacccctgatgacttagtg
ttttctgctgaagaccttaaaggtaataacagcttttgtgatgctgacaggaaagacatt
tctgctgtgtttgttaaagcagatgagaatgccctggtaagaggcatcaatagtgacagc
agtagctctaagtctaggtctcagagctttgttcagagatctcgaagagtggtgcagaaa
ctacagtcctctgaagaggattctaatgaggatgaagacctaccatgttttcaggcatta
atatttggcaagtcatcaagcacacacactcaatcccaaaaacagaagatgtctgtgaga
agatgttcaaatccctcagcacagatgttagcactgcaaagtagcagcagtggcagtgac
aaagttgtacagaagatgcctgaggccaccttaaaagaggtgtgtgtttctccaagccaa
gaatctgaatgttctgttaacttattttcttcccagtccaacatgtcagaagattcagct
aacagaccagaagacttgaggctagtccctagtaccaaagagaagaaaaacttcagtgaa
ggcaaagaagctagtccacatgaaaatgaagagctgaaaggaagaaaaaattctttgcaa
gatgaacaccagggagacccaaatttggaatcaaatataggcgagccatctggatatgat
agtgaagccagtcatctaggagattcatatggtttatcctctcagagagagattcttact
acacagcagaaaaatgacatgcaaaacaacttaaaaaaacttcagcaggnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnngcttgaagcagtgctagaacagcatggaagtcagggctct
gaattgccatgttccagtgtggaaggagcaactgcaacgggactgatgataacagcaaga
ggagcaatgttaacttcagaagcagatctcgacaatcacaaaatctgtagttcagtagga
cttccacgtgatgaattccatggaatgccaaatcattgtttcaacagtaacagcaaagga
ctagaagaggaaaggtcttcatcttcacttctttctacctctaaatctcacttattgaat
aaggaagcttggcaacatagcttttcaaagactcttgcactggaacccaacacaccttct
caagaaggaaagtcccaacaaggtgatgcagcactgctgctagtacaaaaggcagaggaa
cagtgtaatcagtacaggaaagaaccagaaaatgcaacagagcagaagtctgaaacaaaa
ctaaacagtgctgctatcctctccagtccttgtggaaacatgagcaggattccaaacagc
tcccccttgaagtttcttaaaaggctttcccacagccaaactgcagaagcaacaaatggt
tctgccataccttgcaatattgatgataggaagaatactcggggatgtgaactggagagg
agagtatttgcctctgcacatgttccacaccatagagctggaaaagaaaatgccaaaagc
ccagttgtgctcagcaggaaaaaaatgtcaattgtagcatcgggtctcaaccagcatgaa
tttttactggtgcagaagtttgcccggaaaacccagagcactttatctaatcaaatcact
gaaggaacaacccatgtcataatgaaaacagatatggatctagtgtgtgagcgtacacta
aagtactttttgggcatcgcaggaagaaaatgggtggttagctatcagtgggttattcag
tcttttaaggaaagaagaatactttatgagtccgacttcgaagtgagaggagatgtaatc
aatgggagaaaccaccaaggtcctaagagagctagacagtcccaggctggaaagctcttc
aaagactttgagatctgctgctatgggcctttcatggatatgaacacagaaaatttagag
tggatggtagagctttgtggtgcctctgtggtgactcagcttcatctattcactcataag
gcaaaacatactgcagtagtcattgtgcagccagatgcttgggtggaagaaacaggctac
agagcaattcagcagaagtgcagtgctactgtggtgaccagagagtgggtgttagacagt
gttgcatgctatgagcgccaggagtttgatgcctaccttgtgtcccaggaataa
DBGET
integrated database retrieval system
