KEGG   Alligator sinensis (Chinese alligator): 102371819
Entry
102371819         CDS       T02922                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn04115  p53 signaling pathway
asn04210  Apoptosis
asn05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:asn00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102371819 (APAF1)
   04115 p53 signaling pathway
    102371819 (APAF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102371819 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 NB-ARC APAF1_C Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 APAF-1-like_WHD WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 CARD Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_like Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N eIF2A Beta-prop_TEP1_C Beta-prop_HPS5 CARD_2 Beta-prop_NUP159_NUP214 WD40_RFWD3 Ge1_WD40 PEP5_VPS11_N Beta-prop_DCAF12 AAA_16 VPS8_N Nop10p TruB_C
Other DBs
NCBI-GeneID: 102371819
NCBI-ProteinID: XP_006023698
UniProt: A0A1U8D2F3
LinkDB
Position
Unknown
AA seq 1247 aa
MDVKSRNHLLLNRLALERDIKTSYVMDHMITDQVLTLQEEEKVKAQATQRDRAAMLINII
LKKDNNSYISFYNALLHEGYKDLAALLHDGIPSITSYDRKDSTDGVAFCVRTILCEGGVP
QRPVVFVTRPELVNEIRQKLYNLRNDPGWVTVYGMAGSGKSVLTAEALRDQSLLEECFPG
GVHWISVGKQDNAGLLMKLHNLCSRLDLDFTYAQRPPLNIGEAKDRLRLLMLHKYPRSLL
VLDDIWDSQTLKAFDNHCKVLITSRDRSVTDHVTGRKYEVHMESGLNDEKGLEILSLFVD
MKIKDMPAQADKIVRECKGSPLVLSLIGALLRDFPNRWEYYLRQLQNKQFRRIKKSSSYD
YEALDEAMSISVEMLNENFKDFYKDLSILPKDVKVPTKVFCILWDMEPEEVEDMQQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLIEKNREQLQELHEKIVKQYKKHYRLCIPTPGEEDC
MYWYNFLVFHMASAKMQEELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSNILDQKNSLA
RENFQKFLSLNGHLLGRQPFPDIVQLGLCQPETSEVYQQAKLKAHQEVDKGAFYVEWINK
GMKNLSRLVVRPHTDAVYHACFSQDGQKIASCGADRTLQVFKAETGEKLQNIEAHDDEVL
YCAFSPDGRFIATCSADNKAKIWCLRTGKRIFDCGEHTEQVNCCQFNSGNNELLLTTCSN
DSLLKLWDVRNKRCQNTMFGHTSSVNHCRFSPDDKYVASCSADGTVKLWETGSGNELKCI
RIKDFFRNADEQEVEALPKCCSWSTDGATVMVAAKNKLLLLDVETSDLLEEVLSYQNTIQ
YYDFCPSNQLVAVAFSHYSVELWNTKTKTKVADCREHMSWVHCVTFSPDGSLFLTSSNDQ
TIRIWETSKVCKPPEIALKNELDVAFKGDEMMILAILNHTHLQLINGNTGHTVSLTDVED
SISCCCLSEDLQFAAFGQKNGTVKVLEVSGGRVLKSRRGHKTSVQHCLFTSDGQTLISSD
DDPIIQVWNWELEECLFLEGHNETIKNFRLLENSRLLSWSFDGTVKVWNIIHGKIEVNFA
CHKDTVLSCAVSPDATKFSSTSVDKTAKIWSFKSSSILHELKGHEACVRCCTFSFDNKLL
ATGDDKREIRIWDVSSGELLHLCSPVIIDEGGLTHDYWVTDLCFSPDSKMLVSSGGYLKW
WNAVTGEALQTFYTNGTDLQSIYVSSNFKIYVTVDNLGILYVLQMME
NT seq 3744 nt   +upstreamnt  +downstreamnt
atggatgtgaagagtcgaaatcatttgcttctaaaccggttagcattggaaagagacatc
aaaacctcttatgttatggatcatatgattactgatcaagtactaacattacaggaagag
gagaaagttaaagcacaggctacacagcgggaccgagcagctatgctaataaacattatt
cttaaaaaagataacaactcatacatatctttctataatgcactgcttcatgaagggtac
aaggatcttgcagctcttctccatgatggtatcccaagtatcacctcttatgatagaaag
gactctacagatggagtagctttttgtgtgaggacaatcctctgtgaaggtggagtgcca
cagagaccagttgtgtttgttactcgtccggaactggtaaatgaaattagacagaaacta
tacaacttaagaaatgatccaggttgggttactgtttatggaatggcaggttctggaaag
tctgtcttaacagctgaggcactaagagatcaaagcctcttggaagagtgctttcccgga
ggagtacattggatttctgttggaaaacaggacaatgctgggcttctaatgaaacttcac
aatctttgtagtagattagacctggacttcacttatgcacaaaggccaccacttaatatt
ggagaggctaaagaccgtcttcgtctgctgatgctacataaataccccaggtctctcttg
gtcctggatgacatttgggattctcagacattaaaagcttttgataatcattgtaaagtt
cttattaccagcagggataggagtgtgacagatcatgtgactggcaggaaatatgaagtt
cacatggaaagtggattgaatgatgagaagggacttgaaattttatctctctttgttgat
atgaaaataaaagatatgcctgcccaagctgataaaattgtaagagaatgcaaaggttcg
ccccttgtgttatcattgataggcgcattattacgtgatttccccaatcgttgggaatat
tatctcagacagctgcagaataagcaatttagaaggataaagaaatcttcttcttatgat
tatgaagcactcgatgaagcaatgtccataagtgttgaaatgctgaatgaaaactttaaa
gacttctataaagatctttctattcttccaaaggatgttaaagtgcctactaaggtgttc
tgtattctttgggatatggagcctgaagaagttgaagacatgcagcaagaatttgtaaac
aaatctctcttattctgtgatcgtaatgggaaatcattccattattatttgcatgatctt
caacttgacttcctcatagagaagaatcgtgagcaacttcaggagctgcatgaaaagatt
gttaaacagtacaagaaacattatagattatgtatacctactccaggtgaagaggattgc
atgtactggtataactttttagtgttccacatggctagcgctaaaatgcaggaagaacta
cgtgatctcatgttttctctagattggattaaagccaaaacagaattagtaggacctgcc
catctgattcatgaatatgtagaatacagtaatatactggatcaaaagaatagcctagca
cgtgagaactttcagaaatttctctctttaaatggacaccttcttggacgacagccattt
cctgatattgtacagttagggctttgtcaaccagaaacctcagaagtatatcaacaagct
aaactaaaggcacaccaagaagttgataaaggggcattttatgtggaatggataaataaa
ggcatgaagaacctctcccgtttggttgtccgaccacacacagatgcagtttaccatgcc
tgcttttcccaggatggacagaaaatagcttcttgtggagctgacagaacactgcaggtg
tttaaagcagaaactggagagaaacttcagaatatagaagctcatgatgatgaagtactt
tattgcgctttctctccagatggtagattcatagcaacttgttcagcagataacaaagcg
aagatctggtgtttaagaacaggcaagcgtatatttgactgtggggaacatacagagcag
gtcaactgttgccagtttaacagtggaaataatgagcttctcctgaccacttgctcaaat
gacagtttgctcaagctttgggatgtaagaaataagcgttgtcaaaacacaatgtttggt
catacaagttctgtcaatcattgtagattttcaccagatgataaatatgtggctagttgc
tcagcagatggaacagtgaagctttgggaaacaggctcaggaaatgaactgaaatgtatt
aggataaaggatttcttcagaaatgcagatgaacaagaagtggaagcattacccaagtgt
tgctcctggtcaacagatggtgctacagtaatggtggcagccaagaataaacttcttctt
ttagatgttgaaaccagtgatttattagaagaggttttaagttaccaaaacacaatccag
tactatgacttctgccccagcaatcaactggtagcagttgctttctcacactattctgtt
gagttgtggaatactaaaaccaagacaaaagtagctgactgcagggaacacatgagttgg
gttcactgtgtgacattttcccctgatggctctttatttctgacatcttctaatgaccag
acaataaggatttgggagacaagtaaagtgtgcaagcctccagaaattgcgttgaaaaat
gaactagatgttgcattcaagggcgatgaaatgatgattttagcaattctcaatcataca
catctacaactaattaatggaaacacaggccatactgtcagtctgactgatgttgaagac
tctatttcctgctgttgcctgagtgaagatcttcaatttgcggcatttggacagaagaat
ggaactgtaaaggttttagaggtgtcaggtgggagagttttgaaatctaggcgtggacac
aagacctctgtacaacattgcctgtttacctctgatggccagaccctcatttcaagtgac
gatgatccaattatacaggtgtggaattgggagttggaagaatgcttatttctagaaggt
cacaatgaaacaatcaagaattttaggcttttggaaaattcacgacttctttcttggtca
tttgatggaacagttaaggtgtggaatatcattcatgggaaaatagaagtcaactttgct
tgccataaagatactgttctctcttgtgctgtctctcctgatgccactaagttttcatct
acctctgttgataaaactgccaagatatggagcttcaaaagttcctccattcttcacgag
ctaaagggtcatgaagcctgcgtgcggtgctgtactttttcatttgataacaaattattg
gccactggagatgacaaaagggaaatacggatttgggatgtctcaagcggtgaattactt
catctctgctcccctgtcattatagatgaaggaggtctgacacatgattactgggtgaca
gacctctgtttttctcctgacagtaagatgcttgtgtcttctggaggatatcttaagtgg
tggaatgcagttactggagaagccttgcaaacattctacacaaatggaacagatctccag
tcgatatatgtgtcctctaatttcaaaatatatgtgactgttgataacctcggtatcctt
tatgtactacagatgatggaatga

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