Alligator sinensis (Chinese alligator): 102374383 Help Entry 102374383         CDS       T02922                                  Symbol THBS1 Name (RefSeq) thrombospondin-1 isoform X2   KO K16857   thrombospondin 1 Organism asn  Alligator sinensis (Chinese alligator) Pathway asn04115   p53 signaling pathway asn04145   Phagosome asn04148   Efferocytosis asn04350   TGF-beta signaling pathway asn04510   Focal adhesion asn04512   ECM-receptor interaction asn04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:asn00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     102374383 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102374383 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     102374383 (THBS1)    04148 Efferocytosis     102374383 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     102374383 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     102374383 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102374383 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:asn04131]     102374383 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:asn00536]     102374383 (THBS1) Membrane trafficking [BR:asn04131]  Endocytosis   Phagocytosis    Opsonins     102374383 (THBS1) Glycosaminoglycan binding proteins [BR:asn00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102374383 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS EGF_CA Laminin_G_3 TSP1_CCN Laminin_G_2 EGF Motif Other DBs NCBI-GeneID:  102374383 NCBI-ProteinID:  XP_006018565 UniProt:  A0A1U7REK1 LinkDB All DBs Position Unknown AA seq 1176 aa AA seqDB search MGASGGLVLLLALAICKANRIVESGGDDNSVFDLFELIGITRKAPGRRALGVYLVKGAEI SSPAYRIEDASRIAAVSDDKFQDLLDAIYAEKGFILLANLRQPKKSRGALLAVERKDGSG HIFNLVSNGKADTLDLSLSGNGKQQVVSVEDVMLADGHWKNITLFVQEDRAQLYVGCEKM ENAELDFPIQNIFTRNLASSARLRVAKGGVNDNFQGALQNVRFVFGTTLEAILRNKGCSS FTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAICGFSCDELTNMFVELQGLRSMVTTLQ DRVRKVTEENEFIAKVAQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQLNGKPC AGEARETKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKHSRLCNNPEPQYGGKDCVGE PTGTRVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGTCPTGYHGDGIHCKDIDECQE VPDVCFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSIEDATANKQVCKPRNPCTDGT HTCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK KDNCPNLPNSGQEDYDKDGIGDACDSDDDNDNIPDDRDNCPFIYNPQQYDYDRDDVGDRC DNCPYNHNPDQIDTDNNGEGDACAVDIDGDGILNEGDNCQYVYNVDQRDTDLDGVGDQCD NCPMEHNPDQTDTDSDRIGDKCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC DHDDDNDGIPDDKDNCRLVANPDQVDSDGDGRGDACKDDFDQDNVPDIDDICPENVDISE TDFRRFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE HLRNALWHTGNTTGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atgggggcgtccggcggactcgtgctcctccttgcactggctatctgtaaggccaaccgg attgtggagtccgggggagatgataatagcgtgtttgacctctttgagctcattggcatc actcgtaaggcacctgggcgccgggcactaggggtgtatctggtgaagggagctgagatc tccagccctgcctaccgcattgaggatgccagccgcattgctgctgtctctgacgacaag ttccaagacctgctggatgccatctacgctgagaagggctttattctgctggccaatctc cggcagcccaagaagagccgtggtgcactgctggctgtggagcgcaaggatggctctggc catatcttcaacctggtatccaatggcaaggcagacaccctggacctgagcctgtcgggc aatggcaagcagcaggtcgtgtcggtggaggatgtcatgctggctgatgggcactggaag aatatcaccctgtttgtgcaggaggaccgtgcccagctctatgtagggtgtgagaagatg gagaatgctgagctggactttcccattcagaacattttcacccgaaacctggctagcagt gccaggctccgtgttgccaaggggggagtcaatgacaacttccagggagcactgcagaat gtgcgttttgtctttggaacaaccctggaagccatcctgaggaataaaggttgttcaagc ttcaccagtgctatcattacattggacaatccaatcaacggctccagtccagctatacgt accaactatattggccacaaaacaaaggacatccaggccatctgtggcttttcctgtgat gaactcacaaatatgtttgtggaattgcaaggattacggtccatggtcacaactcttcaa gacagagtgcgcaaagtgactgaagaaaatgaattcattgccaaagtagcccagatcact cctggagtgtgcattcacaatggaattctgcacaaaaataaagaagagtggactattgac agctgcactgaatgtacttgccagaactctgccaccatatgccggaaagtgtcatgccct ctcatgccttgttccaatgccactgttcctgatggagagtgctgtccacgatgctggcct agtgactatgcagatgacggttggtctccttggtctgaatggacttcatgctctgtgacc tgtggaaatgggattcagcagaggggccgctcttgtgatagtctcaataaccgctgtgaa ggttcctctgtacagactcggacctgccacctccaggagtgtgataagagatttaaacag gatggtggttggagccactggtcaccctggtcatcttgttctgttacttgtggcacgggc atgatcactagaatccgcctctgcaactctccagttccacagttgaatggcaaaccttgt gcgggtgaagcaagagaaaccaaatcctgccagaaagatccttgtccaataaatggaaac tggggaccctggtctccatgggatgcctgtacagtcacatgtggaggaggccttcaaaaa cacagtcgtctttgcaataaccctgagccccagtatggcgggaaggattgtgtaggtgaa cccacagggactcgggtatgcaacaaacaggactgcccaattgatgggtgtttgtctaat ccctgctttgcgggaactacatgtaccagctctcctgatggctcctggaagtgtggtacc tgccccactggttaccatggagatggtattcactgtaaagatatcgatgagtgtcaagag gttcctgatgtctgctttgtcttcaatggagtgcacaggtgtgagaacactgaacctgga tacaactgcctgccttgcccaccacgttttactggaacacagccttttggccgcagtatt gaggatgctacagctaacaagcaggtctgtaaaccacgtaatccatgcacagatggaact cacacctgcaacaagaatgccaagtgcaattatcttggccacttcagtgacccaatgtac cgctgtgaatgtaagcctggctatgctggcaatggcattatctgtggggaagataccgac ttggatggatggccaaatgaaaaccttgtctgtgttgccaatgccacttaccattgcaaa aaagataactgccccaaccttcccaactctggccaagaagactacgataaggatggaatt ggtgatgcctgtgacagtgatgatgataatgataacatcccagatgacagggacaattgc ccatttatttacaacccacagcaatatgactatgatagggatgatgttggtgaccgttgt gacaattgcccctacaaccacaaccctgatcagatagacaccgataacaatggtgaaggt gatgcatgcgctgtggatattgatggagatggcattctaaatgaaggggacaactgtcaa tatgtctacaacgtagaccagagagatacagatttggatggtgttggagatcagtgtgac aactgtcctatggaacacaatccagaccagacagacacagactctgaccgcataggagat aaatgtgacagcaaccaggacatagatgaagatggccatcaaaataaccttgataactgc ccctatgtacctaatgccaatcaagctgaccatgacaaggatggcaaaggtgatgcctgt gaccatgatgatgataatgatggtatccctgacgacaaagataactgcagattggttgcc aacccagaccaggtggactctgatggtgatggtcgtggcgatgcttgcaaagatgacttt gaccaagataatgtgccagatattgatgacatttgtccagaaaatgttgatatcagtgaa actgatttccgacgatttcagatggttccccttgatcccaagggaacatcccaaaatgat cccaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgatcct ggtcttgcagtgggttttgatgaattcaatgctgtagatttcagtggcacattcttcatc aacactgagagggatgatgactatgctggctttgtatttggttatcagtctagcagccgt ttctacgtagtgatgtggaagcaaatcacccagtcctactgggactcaacaccaaccaaa gctcagggatactctggtctttctatcaaagtagtgaattccaccacgggtccaggagag cacctgcgtaatgctctgtggcacacaggaaacacaactggacaggtgcgaaccttgtgg catgaccctcgtcacataggctggaaagattttactgcctacagatggcgtctcagccat agaccaaagactggctacattagagttgtaatgtatgaaggaaagaaaatcatggctgat tcaggaccaatctatgacaaaacttatgctggtggtcggttaggattatttgtcttttca caagaaatggtgttcttctcggatctcaaatatgaatgcagagatccataa

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