Alligator sinensis (Chinese alligator): 102379559
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Entry
102379559 CDS
T02922
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102379559 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asn03000
]
102379559 (KDM2B)
04121 Ubiquitin system [BR:
asn04121
]
102379559 (KDM2B)
03036 Chromosome and associated proteins [BR:
asn03036
]
102379559 (KDM2B)
Enzymes [BR:
asn01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102379559 (KDM2B)
Transcription factors [BR:
asn03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102379559 (KDM2B)
Ubiquitin system [BR:
asn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102379559 (KDM2B)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102379559 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102379559 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
LRR_4
Motif
Other DBs
NCBI-GeneID:
102379559
NCBI-ProteinID:
XP_006015260
UniProt:
A0A1U7RLT3
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MKLSKKMEAEKDSGRRLRSIGRRRYDENEDLSDVEEIVSIRSFNLEEKLKSKMYHGDFVH
AMEGKDFTFEYVQREALRIPLIFRSKDGLGIKMPDPDFTVRDVKLLVGSRRIVDVMDVNT
QRGVEMSMSQFVRYYETPEAQREKLYNVISLEFSHTKLENIVKRPNVVDLVDWVDNMWPQ
HLKERQTDATNAISEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIP
PTLQNLELYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVF
GGNILHSFNVPMQLRIYDIEDRTRVHAKFRYPFYYEMCWYVLERYVSCVTQRCHLSKEYQ
KESMLIDAKRKRSIDSFSSDSWLDMDEESCDAHPREEKDDSLDQNPKPVGDGSSSPNSTH
SEGKEGAGRKQKATVMRYLKRTLSNESDDSVKSTTPTDYPKTPTGSPATEVSTKWTHLTE
FELKGLKALVEKLESLPENKKCVPEGIEDPQALLEDMKTILKEHADDDQNLAISGVPVVS
WPKKTTKNRAVGRPKGKLGTASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCK
DMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEESKFNLMLMECSIC
NEIIHPGCLKVKESDGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQ
KINRDNKEITDAAKRKSECEETPRRKSEEHAKKSPVDSISRRKSDEVHLRRKRKFEKPQE
PAMRKRLKLGKEEKLFRKKRRSWKATDDRPTVVKPLRRLKQEPEEDLPEAPPKSKESDQS
RSSSPTAGPSTESAEPRDKKKFKIRRKRRLPNKELSKELSKELNQEIQKTENSLANENHQ
PIKSEPESENEEPKRALNNSERHHKFSKGLNGTPRELRHQLMPSLRSNLRGIARPPPSLS
PPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMQREVWMAVFGYLSHRDLCICMRVCKT
WNRWCCDKRLWTKIDLNHCKSITPLMLSGIIRRQPVTLDLSWTNISKKQLSWLINRLPGL
RDLLLSGCSWIAVSALCSSSCPLLRTLDVQWAEGLKDAQMRDLLSPPTDNRPGQIDNRSK
LRNIVELRLAGLDITDASLRLIIRHMPLLSKLNLSYCNHVTDQSINLLTAVGTTTRDSLT
EINLSDCNKVTDQCLSYFKRCGNICQIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKL
LQKLS
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctccaaaaaaatggaggcagagaaagactctggaagaagattgcgctctatt
ggtagaagaaggtacgatgagaacgaggacctctccgacgtggaggagattgtcagcatc
aggagttttaatttggaggagaagttaaagagtaaaatgtatcatggggatttcgtgcat
gccatggaagggaaagatttcacttttgagtacgtgcaaagagaagctctcaggattccc
cttattttcagaagtaaagatggacttggaattaaaatgcctgacccagatttcaccgtc
agagatgtgaagttactagtgggaagccgtcggattgtggatgtaatggatgtgaacaca
cagagaggggttgagatgagcatgtcccagttcgtgaggtattatgaaacaccagaggcc
cagcgtgagaagctttacaacgtcatcagtctggagttcagtcacaccaagttggagaac
attgtcaagcgccccaatgtggtggatttagtcgactgggtggataacatgtggccgcaa
catttgaaggagagacagacagatgctactaatgccatttcggagatgaaataccctaaa
gtgaaaaagtattgtttgatgagcgtgaaaggatgcttcactgattttcacattgatttt
ggtggcacttcagtgtggtatcacgttttccgaggagggaagatcttctggctgattccg
cctactctgcagaatctagaactttatgaagaatgggttctctcgggaaagcaaagtgat
atctttctgggagacagggtggaacgatgccaaagaattgagttgaaacaaggctataca
ttttttattccttcagggtggatacatgcagtttatactccagtagattctctggtgttt
ggtggaaatatcctgcatagctttaatgttcccatgcagcttcgcatctatgacattgag
gacagaacaagggtgcatgccaaattccgttatcctttctactatgaaatgtgctggtat
gttctggagagatacgtgtcctgtgtgacccagcgctgtcacctcagcaaagagtaccag
aaagaatcaatgttaattgatgcaaaaagaaaacgcagcatagacagcttctcatcagat
tcctggttagacatggatgaagaatcttgtgatgcccacccccgggaggagaaggatgac
agcttggatcagaaccccaaacccgtgggtgacggctcctcctcgcccaacagcacacac
tccgaggggaaggaaggggctgggaggaagcagaaagccacagtaatgcggtacctcaaa
agaactttgtccaatgagtcagatgacagcgtgaagtcgacaacccccacggactatccc
aaaacgcccacagggtcaccagccacagaagtctccaccaaatggactcacctcacagag
tttgaattgaagggtttgaaagccctggttgaaaagcttgaatccctcccagagaacaag
aagtgcgttccagaaggcattgaggatccccaggctctgctggaggatatgaagaccatt
ctgaaggagcatgcagatgacgatcagaaccttgccatttcgggggtccccgttgtaagc
tggcctaagaagaccacaaagaacagagcagtcggacggcccaaagggaagctgggcact
gcctctgcagtgaagctcgcggcgaatcggacgacggcaggagcgcgccggaggaggacg
cgatgccgcaagtgcgaggcgtgtctgcggacagagtgcggcgagtgtcacttctgcaaa
gacatgaagaagttcggggggcctggcaggatgaagcagtcctgcatcatgaggcagtgc
attgcaccggtgctgcctcatactgctgtgtgtctggtgtgcggagaagctgggaaggag
gacacggtggaagaggaggagagcaagtttaatctcatgctaatggagtgttctatttgt
aatgaaatcatacacccaggatgccttaaggtgaaggagtcggacggcgtggttaacgac
gagctgcccaactgctgggagtgccccaagtgcaaccacgcagggaaaactgggaaacaa
aagcgcggaccaggattcaaatacgcatccaatctcccaggctcactgctgaaggaacag
aagataaatcgagacaacaaggaaattacagacgctgcaaagcggaaaagcgaatgtgaa
gagacccccaggcggaagtcagaggaacatgctaagaagtctcctgttgactccatctcg
aggagaaagtcggatgaggtgcatctgcgaaggaaaaggaaatttgagaaaccccaagag
cctgctatgaggaaacggctaaaacttggaaaagaagagaaactcttcaggaaaaagagg
cgatcgtggaaggcgacagacgaccgacccactgtggtcaagcccctgcggcgtctgaaa
caggagcctgaggaggacctgccagaggcacctccgaaatccaaggagagtgaccagtca
cgatcaagctcccccaccgcggggcccagcacggagagcgccgagcccagggacaagaag
aagttcaagatacggcggaaaaggcggctcccgaataaggaactgagcaaagagctcagc
aaggagctcaaccaggagatccaaaaaaccgagaacagccttgccaacgagaaccatcag
cccatcaagtcggaaccagagagcgagaacgaggagcccaagcgggcgctgaacaacagc
gagagacaccacaagttcagcaaagggctgaacgggactcctagggagctgcggcaccag
ctcatgcccagcctgcggagcaacctgcggggcattgcccgcccgcccccttcgctctct
cctcccaagtgcatccagatggaacgccatgtcatccgcccaccccccatcagcccccct
ccggactcactgcccttggatgatggggcagcccacgtgatgcagagggaagtctggatg
gctgtctttggctacctcagtcatagagacttgtgcatctgtatgcgagtgtgcaagacc
tggaacagatggtgctgcgataaacgactatggaccaaaatagatctgaaccattgtaaa
tccataactccgctcatgctcagtggtatcatcaggagacagcctgtaacccttgacctt
agctggacaaacatatccaaaaagcagctgagctggctcatcaataggctcccaggtctg
cgagacctgctgttatcagggtgctcatggatagcagtgtcagcactttgtagttccagt
tgccctttgctccgaaccctggatgtccagtgggcagaaggattaaaagacgcacaaatg
agagacctcttgtcaccgccaacagataaccggccaggtcagatcgacaaccggagtaaa
ctgcggaacatagttgagctgcgtttggctggtctggatattacagacgcttctttgagg
ttgatcataaggcacatgcccctgctttccaaactcaatcttagttactgtaaccacgtg
accgatcagtcgatcaatctgttgactgcggtaggaaccaccacacgggattccttaaca
gaaatcaacttatcagactgcaataaggttactgaccagtgcctgtcttactttaaacgc
tgcggaaacatctgtcagatcgacttgaggtactgcaagcaagtgacaaaggaaggctgt
gagcagttcatagcggaaatgtcagtaagtgttcagttcggtcaggtggaagagaaactt
ctgcaaaaactgagttag
DBGET
integrated database retrieval system
