Candidatus Arthromitus sp. SFB-mouse-NL: SFBmNL_01378
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Entry
SFBmNL_01378 CDS
T03243
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
aso
Candidatus Arthromitus sp. SFB-mouse-NL
Pathway
aso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SFBmNL_01378 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aso03400
]
SFBmNL_01378 (nth)
Enzymes [BR:
aso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SFBmNL_01378 (nth)
DNA repair and recombination proteins [BR:
aso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SFBmNL_01378 (nth)
Prokaryotic type
SFBmNL_01378 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AID45277
LinkDB
All DBs
Position
complement(1406707..1407336)
Genome browser
AA seq
209 aa
AA seq
DB search
MKKKFKIIVDKLIESYPDARCELEYKSPFQLLIATVLSAQTTDKKVNEVTKNLFIEYPRL
EDFLKLDEKELQDKIKSIGLYRMKSKNIINLCRILEERFDSEVPRTRDELITLPGVGRKT
ANVVISNCFGVQAFAVDVHVFRVSNRIGIANSPTPEKTELDLMKNIDENLWTICHHTIIF
HGRRCCTSRKPNCGECKISEYCKYYKQNN
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagtttaagattatagtagataaattgattgagagttatcctgatgctagg
tgtgaacttgaatataagagtccatttcaattacttatagctacggttttatccgctcaa
actacagataaaaaagtaaatgaggtgacaaagaatttatttatagaatatccaagattg
gaagactttttaaaattagacgagaaggagcttcaagacaagataaaatctattggatta
tataggatgaagagtaaaaatattataaatttatgtaggattttagaggaaagattcgat
agcgaagttcccagaactagagatgaattgataactttacctggtgtagggcgtaaaact
gcaaatgttgttatatctaactgttttggtgtacaagcttttgcagttgatgtacatgta
tttagagtgtctaatagaataggtatagctaattcaccgactccagagaaaaccgagtta
gatcttatgaaaaatattgatgaaaatttatggacaatttgccatcatactattattttt
catggaaggagatgctgtacatctaggaagccaaattgtggagaatgtaaaataagtgaa
tattgtaaatattataaacaaaataattag
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