Acinetobacter soli: BEN76_09350
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Entry
BEN76_09350 CDS
T04684
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
asol
Acinetobacter soli
Pathway
asol03030
DNA replication
asol03410
Base excision repair
asol03420
Nucleotide excision repair
asol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BEN76_09350 (ligA)
03410 Base excision repair
BEN76_09350 (ligA)
03420 Nucleotide excision repair
BEN76_09350 (ligA)
03430 Mismatch repair
BEN76_09350 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asol03032
]
BEN76_09350 (ligA)
03400 DNA repair and recombination proteins [BR:
asol03400
]
BEN76_09350 (ligA)
Enzymes [BR:
asol01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BEN76_09350 (ligA)
DNA replication proteins [BR:
asol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BEN76_09350 (ligA)
DNA repair and recombination proteins [BR:
asol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BEN76_09350 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BEN76_09350 (ligA)
MMR (mismatch excision repair)
DNA ligase
BEN76_09350 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BEN76_09350 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
AphA_like
5_3_exonuc
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
APV36212
UniProt:
A0A1P8EJ80
LinkDB
All DBs
Position
complement(1964930..1966960)
Genome browser
AA seq
676 aa
AA seq
DB search
MMQPADIVAQMRQLIQLIAKHNHAYYVMDQPTITDNEYDQLFHQLKALEADHPDLVQADT
PTNRVGGQALTKFQTVTHTVPMLSLGNVFNQEDLFAFARRIEERLPNQQIQYDVELKLDG
LAISLWYEDGKLVRGVTRGDGETGEDITQNVKTIRNLPKHLHHSSQPVPRFLEVRGEVLM
PKLGFERLNAANEAKGEKTFANPRNAAAGSLRQLDPSIAASRPLAFYAYGIAQCEPAHGL
ASMHESLQWLTALGFEIAERQFLCSSIQEVQQRYEQIQQERPQLAVEIDGMVIKVDDLKQ
QQQLGFLSREPRWATAYKFPAEVAMTTVENIDWQVGRTGTLTPVARLAPVLVGGVTVSNV
TLHNIGEIHRLDVRIGDRVSVYRSGDVIPKVEKVWPEFRPEKAVEVQLPAQCPVCSSPVV
MPEGEALARCSGGLYCAAQRIEAIRHFVSRKAMDIEGLGDRWVESLLHLDLLKDVADIYH
LHEHREKLLTIEKMGEKSVQNLIDAIEASKKTTLARFIYALGIRGVGETTARMLANTFQT
LDALKQADVDMLKKTPDVGDITAEWIYDFFLAEHNVEVIERLLAAGIHWDAPIAPTRQPL
NGESWVVTGTLSTMGRDEATQRLQALGARVSGSVSSKTKCVVAGEKAGSKLDKAEKLQVR
VMNEDEFLAFLAQYNA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacctgctgatattgttgcgcagatgcggcagctgattcaattaatcgcaaaa
cacaatcatgcttattacgtgatggatcaacccaccattacagataacgaatatgaccag
ttgtttcatcagcttaaagcacttgaggccgatcatcctgatctggtacaggcagataca
cccaccaatcgcgtgggtgggcaggcattaacaaaatttcaaaccgtaacgcatacagtt
ccgatgctgtcgttggggaatgtatttaatcaagaagatttgtttgcttttgcacgccgg
attgaagagcgcttgcccaatcaacagattcagtatgatgtcgagctaaagctggatggt
ctggcaatttcactgtggtatgaagatggaaagctggtgcgtggggtcacacgtggcgat
ggtgaaacaggtgaagacattacccaaaacgtgaaaaccattcgcaatttaccgaaacat
ttacatcatagctcacagcctgttccgcgcttcttagaagtgcgtggtgaggttttgatg
ccaaagctcggttttgaacgtttaaatgcggccaacgaggccaagggtgaaaaaacattt
gcaaacccgcgtaatgccgcagctggaagtttacgacagcttgatccgagtattgcagcg
tcgcgtcccttggcattttatgcctatggtattgcacagtgtgagcctgcacatggcttg
gccagtatgcatgaaagcttgcaatggttaacagcgctgggttttgagattgcggagcgt
cagtttctatgttcatcgattcaggaagtccagcagcgctacgagcaaatacagcaagag
cggcctcaattggcagttgaaattgatggcatggtcatcaaagtcgatgatctgaaacag
cagcagcaactgggttttttaagccgtgagccgcgctgggccaccgcctataagtttcct
gcagaagttgccatgaccacagtcgaaaatattgactggcaggtcgggcgcactggaaca
ctgacgccagtggcacgtctggcacctgttttggtgggtggcgtgacggtatctaacgta
acactgcataatatcggtgaaattcaccgtctggatgtgcgtattggcgatcgggtcagt
gtatatcgtagtggagatgtgattccaaaggtggagaaagtctggccagaatttcgccct
gaaaaagcagttgaagtacaattaccagcacaatgcccggtatgttcatcccctgtggtg
atgcctgaaggtgaagcactggcgcgttgttcgggtggtttgtactgcgccgcacagcgt
atcgaggccattcgtcattttgtatcacgtaaagccatggacattgaaggcttgggagat
cgttgggtggagtcattgctgcatcttgatttacttaaagatgttgcagacatttatcat
ttacacgaacaccgtgaaaaattgctcacgattgaaaaaatgggtgagaaatctgtacaa
aacctgatcgatgcaattgaagccagtaaaaaaaccacattggcacgttttatctatgca
ctcggtattcgaggtgtgggcgaaacaacggcccgaatgctggccaataccttccagaca
ctggatgccttgaaacaggccgatgtcgacatgctgaaaaaaacgccagatgtcggtgat
attaccgcagaatggatctacgatttctttttggcagagcacaatgtcgaagttattgaa
cgcctactggcagcgggaattcactgggatgcaccgattgctccgacacgtcagccactc
aatggtgaaagctgggtggttacggggacgttaagtaccatggggcgtgacgaagccaca
cagcgcttgcaggcattgggtgcgcgtgtgagcggaagtgtatcgagtaaaaccaagtgt
gttgtggcgggtgagaaagcgggcagtaaactcgataaagcagaaaaactgcaagttcga
gtgatgaatgaagatgagtttttagcatttttagcgcaatacaacgcttaa
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integrated database retrieval system
