Actinobacillus suis ATCC 33415: ASU1_05975
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Entry
ASU1_05975 CDS
T03246
Symbol
rumB
Name
(GenBank) 23S rRNA methyluridine methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
ass
Actinobacillus suis ATCC 33415
Brite
KEGG Orthology (KO) [BR:
ass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ass03009
]
ASU1_05975 (rumB)
Enzymes [BR:
ass01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
ASU1_05975 (rumB)
Ribosome biogenesis [BR:
ass03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ASU1_05975 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_32
Methyltransf_4
Cons_hypoth95
Methyltransf_15
UPF0020
GFO_IDH_MocA
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AIJ31458
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All DBs
Position
1326764..1327936
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AA seq
390 aa
AA seq
DB search
MILNCPHFQQQHCVSCQWLEKPYSTQLINKEADLKRLISPFILQKFTEILPPVQSSQKQF
RNKAKMVVSGSVERPILGILKDQTDPQSGIDLCDCPLYPTEFEALFPILKDFIARAGLVP
YNISKKKGELKYILLTQSQYNQSVMLRFVLRSEQKRPLVERELPNLLAKLPKDSVVSLNI
QPQHAAILEGETEIFLTEKTTIEENFNGIPLFIRPQGFFQTNPNVASQLYATAQNWIKEL
SIQQFWDLFCGVGGFGLHCAKALQEKNENVQLTGIEISASAIASATKSAEQLQLKNITFA
SLDSAQFALNEKGATPDLVIVNPPRRGIGKPLAEFLNQLGTPYLIYSSCNAQTMAKDFEA
LSNYSLQKVQLFDMFPHTSHYEVLTFLIKK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatattaaattgcccacatttccaacagcaacactgtgtttcatgccaatggttagaa
aagccatattctacacagcttataaataaagaagctgatcttaagcggttaatttcgcct
tttattttgcaaaaattcactgaaatcttaccgcctgttcaatcttcacaaaaacagttt
cgcaataaagcgaaaatggtggtctccggcagtgtcgagcgcccgattttagggatttta
aaagatcaaaccgatccgcaaagtggtattgatctgtgtgattgtccactctatccgact
gaatttgaagcacttttcccgattcttaaagattttattgcccgagccgggcttgtacct
tataacatctcaaaaaagaaaggcgagttgaaatatatcctgctgacccaaagccaatat
aaccaatccgttatgttgcgttttgtgctaagaagtgagcaaaaacgaccgcttgttgag
cgtgaattgccaaatttattagctaagctgccgaaagattctgtggtcagtttaaatatc
cagccacaacacgctgcaattttagaaggtgaaaccgaaattttcctcaccgaaaaaacc
acgattgaagaaaattttaacggcattccgttatttattcgtccacagggctttttccaa
actaatccgaatgttgcaagtcagctttatgctactgcgcaaaattggataaaagagctg
tcgattcagcaattttgggatctgttctgcggtgtcggaggctttggtttacattgtgca
aaagcgctacaagagaagaatgaaaatgtacaattaaccggtattgagatttcagcttct
gcaattgccagtgccacgaaatccgccgagcaattacaacttaaaaatattacattcgct
tcgcttgactcggcacaatttgcactgaacgagaaaggtgcaaccccggatcttgtgata
gtgaatccgcctcgccgtggtattggaaaaccgcttgcggagtttttaaaccaattgggt
acaccttatttaatttattcaagctgtaatgcccagacgatggcgaaagattttgaagca
ttgagcaattactcactccaaaaggtgcaattattcgatatgtttccgcatacttcacat
tacgaagtacttacttttcttataaaaaaataa
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