Asticcacaulis sp. DW145: ATDW_05700
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Entry
ATDW_05700 CDS
T10232
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
astd Asticcacaulis sp. DW145
Pathway
astd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
astd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATDW_05700 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
astd03400
]
ATDW_05700 (nth)
Enzymes [BR:
astd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ATDW_05700 (nth)
DNA repair and recombination proteins [BR:
astd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ATDW_05700 (nth)
Prokaryotic type
ATDW_05700 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
ORC6_2nd
HHH_5
RecR_HhH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
BEV10074
LinkDB
All DBs
Position
1:643197..643835
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AA seq
212 aa
AA seq
DB search
MRSAAAVKKLFERFEADQPDPRTELNFSNPFTLVVAVALSAQTTDVAVNKATGPLFALAD
TPQAMLDLGEERLMQMISSIGLYRNKAKNVMEMCRILINRFDGQVPLNRSDLLSLPGVGN
KTASVVLNELHIEPAIAVDTHVYRVSHRLGLVDDSATTPDKVEAQLMASIPRKWLTRAHH
WLILHGRYTCTARGPKCMACLVEDLCPKRGVG
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagtgcggccgccgtcaaaaagctgttcgagcgctttgaggccgatcaaccggac
cccaggaccgaactgaacttctccaatccctttacgctggtggtggctgtcgccctgtcg
gcccagacgaccgatgtggcggtcaacaaggcgaccgggccgctgtttgcgctggccgac
acgccgcaggccatgctcgatctgggcgaagaacggctgatgcagatgatctcctccatc
gggctttatcgcaacaaggccaaaaatgtgatggagatgtgccgtatcctgatcaaccgt
ttcgacggtcaggtaccgctcaatcgctcggacctgctcagcctgccgggcgtgggcaat
aaaacagcctcagtggtgctcaatgagctgcatatcgagccggccattgcggtcgatacg
cacgtctatcgcgtctcgcaccggctggggctggtcgatgacagcgccaccacgccggac
aaggtcgaggcgcaactgatggcctcgatcccgcgcaaatggctgacgcgggcgcaccac
tggctgatcctgcacgggcgctatacctgcacggcgcgcggccccaagtgcatggcctgt
ctggtcgaagacctatgccccaagcgaggggtgggttag
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