Antennarius striatus (striated frogfish): 137608439
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Entry
137608439 CDS
T10427
Symbol
kdm2bb
Name
(RefSeq) lysine (K)-specific demethylase 2Bb isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
137608439 (kdm2bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
astr03000
]
137608439 (kdm2bb)
04121 Ubiquitin system [BR:
astr04121
]
137608439 (kdm2bb)
03036 Chromosome and associated proteins [BR:
astr03036
]
137608439 (kdm2bb)
Enzymes [BR:
astr01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
137608439 (kdm2bb)
Transcription factors [BR:
astr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
137608439 (kdm2bb)
Ubiquitin system [BR:
astr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137608439 (kdm2bb)
Chromosome and associated proteins [BR:
astr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
137608439 (kdm2bb)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
137608439 (kdm2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
F-box
Cupin_8
LRR_4
Rubredoxin
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
137608439
NCBI-ProteinID:
XP_068190924
LinkDB
All DBs
Position
15:complement(11878326..11897464)
Genome browser
AA seq
1387 aa
AA seq
DB search
MAQAGETCAEPGRRLRSICRMMYDENEDLSDVEEMANIRGFSVEEKLVSDSYCSKYVHIL
EGKDFSYEYVQREALRIPLIFKEKNGLGIRMPEPEFTISEIKGLVGSRRSVDVMDVSTQK
GTEMSMAQFARYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPDL
KYSQTEATNVISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGCKVFWLVPPT
PHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKKGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIENRTKVHSKFRFPFFYEMCWYVLERYLHCLTKRSYLSQEFRKE
PVVTDFVTKPNTESPSSDSRSLDMNEDSCETQIRDVQGEKSDRAQNGPWSPDNRRGQYLK
AFLSMDSEDSCNPCSTSIDFPQTPSDSPASECQSKWTHLTEFELSGLKTLVEKLESLPEN
KKCVPEGIENAQALLEDMKVVLKEHADDDPKLAISGVPVVYWSKKSMKPRPPNRPKPKMA
ASPASAAKLSSSRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIM
RQCIAPVLPHTAVCLICGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSSGV
INDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEPRLNRDSKEEPDLPMVAT
ATVTALTATSAVKRKAERDDCPKRKEEEPPKKRPPLLSLDGLPRPRLEENPLRKKRKLFD
TNDEPVIVKKKKKLLKPEDPSTPKLLRHIKTENDYGEEEDNKNKDGFFLDMIHKVKSEYD
DDDQEEEEEEEEEDTVKRERESNAEDKTKMVFSPLLRTSAARENEQSSNSPRAGPSGESG
DAQERTSTPLKGRHQRRRLPNKEPSKDSNQETAKTEDCPSNQNNSSVKTEESPANHNRRP
LKSEESVTNQNRKPPKTEDLTANQNHRTLKAEEGLANQNRRPLKTDDSLANQNHRPVKSE
PENESEDQKPRWLLNNGSSDLGDWLRHRGREVKEMQRGYSPLSWNRSTQFTSVCPRPLPC
RSPPKCIQMERHVIRPPPISPPPDRLALNDGDAHVMRREMWMAVFGHLTHRDLCVCMRVC
RTWNRWCCDKRLWKLINLNRCKSITPLMLSGIIRRQPAALNLSWTNISKKQLSWLINRLP
GLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNR
SKLRNVEDLRLAGLDITDTSLRLIIRYMPSLSKLDLSYCNHVTDQSVNILTAAGTTTRDS
LTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFVAEMSVSVQFELIEE
KLLKKIS
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggccggggaaacgtgtgcggaaccgggacgcaggctgcgctccatctgccgg
atgatgtacgatgagaacgaagatctgtccgatgtggaagaaatggcaaacatcagaggt
tttagtgttgaggaaaaactcgtcagtgacagttactgttctaaatatgtccacatcctg
gagggcaaagacttttcttatgaatacgtgcaaagggaagctctgaggatccctctcatt
tttaaagagaaaaatggacttgggatcagaatgcctgaacctgaatttacaataagtgaa
attaagggtttagtcggcagtcgcaggtctgtggatgtgatggatgtgagtactcagaaa
ggcactgaaatgagcatggctcagtttgcccgttattacgagacaccagaggaagagcgg
gacaaactcttcaatgtcatcagcttagagttcagccacactaagctggagaacctcatc
aagcggcccacagtggtggatcaagttgactgggtggacaatatgtggcctcccgatctg
aaatacagccaaactgaagccactaatgtgatctcagaaatgaaataccctaaagtgcaa
aggtattgtctcatgagtgtgaagggctgctacacagacttccatattgattttggggga
acgtcggtctggtatcacgttttcaagggttgcaaagttttttggcttgtgccaccaacc
ccacacaatctagctctctatgaggactgggtcctctcgggaaagcagagtgatatcttc
ctgggagaccgagctgatggatgccagagagtggagcttaagaaaggatacaccttcttc
atcccatctgggtggatccacgctgtctacaccccagaggacacacttgtttttggaggc
aacattctgcacagctttaacattcctatgcagctaacaatccatgagatagagaatagg
accaaggttcattccaagtttcgttttcccttcttctacgagatgtgctggtacgtcctg
gagcggtacctccactgcctgaccaaacgctcctacttgtctcaagagttccgcaaagag
cctgtagtaacggacttcgtgacaaaaccgaacacagaaagcccctcctcagactcaagg
agtctggacatgaacgaggactcgtgtgagactcagatcagggatgtccagggcgaaaaa
tctgacagggcccagaacggcccctggtctccggacaaccggaggggccaatacctcaaa
gcgtttttatccatggactccgaggacagctgtaatccctgctccacctccatagatttt
ccacaaacgccttccgactctccggcctcagagtgtcaaagtaaatggacgcatttgact
gagtttgaactgagcggactcaagacgctggtggagaaactggaatcgctccccgaaaac
aagaaatgtgttccggaggggatcgagaacgcacaggccctgctggaagacatgaaagtt
gttttgaaagaacacgccgacgacgacccaaagttagcgatcagcggcgtcccggtggtt
tactggtcaaagaaatctatgaagccacggcctcccaaccggccgaaacccaagatggca
gcttctcccgcatcagcagccaaactgtcatccagtcgaggaacatctggagcgaggagg
aggaggactcgctgccgaaagtgtgaggcgtgcttacggaccgagtgcggagagtgccac
ttctgtaaagacatgaagaagttcggcgggccgggtcgcatgaagcagtcctgcattatg
aggcagtgcatcgcacccgtcctgccccacacagcggtgtgtctcatctgtggagaggca
ggaaaggaggacacggtggaagacgaggaagagaagtttaacctcatgctcatggagtgt
tccatctgcaacgagatcgttcatcccaactgtctgaaggtgaaagattcaagtggagtt
ataaacgatgagctgccaaactgctgggaatgtcctaagtgcaaccatgctgggaaaaca
ggaaaacaaaaaagggggccagggttcaagtacgcatcaaaccttcctggctcgttgcta
aaggaaccccggttgaaccgggattcaaaggaggaacccgacctgccgatggtggcgaca
gcaaccgtcaccgctttgaccgccacgtctgctgtgaagagaaaggcagagcgagacgac
tgccccaagaggaaagaggaagagcccccaaagaaacgtccacccctgttgtctctggat
ggtttgccccgacccaggctggaggaaaacccactgaggaaaaagaggaaactttttgac
accaatgatgaacctgtaattgtgaaaaagaagaagaagcttttgaaaccagaagatccc
tcaactccgaagctgctgcggcacatcaagacagagaacgattacggcgaggaagaggac
aacaagaacaaagatggattcttcttggatatgattcataaggtcaagagcgaatatgat
gatgatgaccaggaagaagaggaggaagaggaggaagaggacactgtgaaaagagagaga
gagagtaacgcagaggacaaaaccaagatggtgtttagtccgctgctgagaacatctgca
gccagagagaacgagcagtcgtccaactcccccagagccggaccgagcggcgaatcggga
gatgctcaggagaggacctcgactccgcttaaaggtcgccaccagcgtcgacgcctcccc
aacaaagagccgagcaaggactccaaccaggagacggcgaagacggaagactgtccgtcc
aaccagaacaacagttcagtgaagacagaggaaagcccagccaatcacaaccgacgacca
ctgaagagcgaagagtctgtgaccaatcagaaccgtaaaccgccgaaaacagaggacctg
acagccaatcagaaccacaggacccttaaagcagaggagggtctggccaatcaaaacaga
cggcctctgaaaacggatgacagcctggccaatcagaaccacaggcctgtaaaatcggag
cctgagaacgaatcagaagaccaaaagccccgatggctcctcaacaatggcagcagcgac
ctgggggactggctgcggcaccggggccgcgaggtgaaggagatgcagcgcggctactcg
ccgctcagctggaacagaagcacgcagttcacgtcggtatgccctcgcccgctgccctgc
cgatcgccgcccaaatgcatccaaatggagcgtcacgtgatccgacctccacccatcagc
ccccctcccgacagactcgcgctgaacgacggcgacgcgcacgtgatgcgaagagagatg
tggatggcggtgttcggtcacctgactcacagagatctctgcgtctgcatgcgtgtctgc
aggacctggaacagatggtgctgcgacaagaggctgtggaagctgatcaatctgaaccgc
tgcaagtccatcacgcctctcatgttgagcggaatcatccggagacagccggcagccctg
aacctgagctggaccaacatctccaagaaacagctcagctggctcatcaacaggctgcca
ggcctgcgggtgctgctcctgtcagggtgctcctgggtggccgtctctgctctttgcacc
tccagctgtcctctgctacgaactctggatgttcagtgggtcgaggggctgaaagatgct
cagatgagggacctcctgtcgcctcccacagacaacaggccaggtcagttagacaacagg
agtaagctgcgtaacgtggaggacctgcgtctggcgggtttggacatcactgacacgtcg
ctgcgtctcatcatacgctacatgccctcgctgtccaagctggacctcagctactgcaac
cacgtcaccgaccagtctgtcaacatcctgacagcagcgggaacgaccaccagagactcg
ctcacggacatcaacttatcagtctgtaacagggtcacggaccagtcgctgacctatttc
aagcgctgcgggagcatctgtcacatcgacctacgttactgcaaacaggtgaccaaggaa
ggatgcgaccagttcgttgcagaaatgtccgtcagcgtgcagttcgaactgatcgaggag
aagctgctgaaaaagatcagttag
DBGET
integrated database retrieval system
