Antennarius striatus (striated frogfish): 137610491
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Entry
137610491 CDS
T10427
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04115
p53 signaling pathway
astr04145
Phagosome
astr04148
Efferocytosis
astr04350
TGF-beta signaling pathway
astr04510
Focal adhesion
astr04512
ECM-receptor interaction
astr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137610491
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137610491
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137610491
04148 Efferocytosis
137610491
09143 Cell growth and death
04115 p53 signaling pathway
137610491
09144 Cellular community - eukaryotes
04510 Focal adhesion
137610491
09142 Cell motility
04820 Cytoskeleton in muscle cells
137610491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
astr04131
]
137610491
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
astr00536
]
137610491
Membrane trafficking [BR:
astr04131
]
Endocytosis
Phagocytosis
Opsonins
137610491
Glycosaminoglycan binding proteins [BR:
astr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137610491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
TSP1_CFP_C
cEGF
Motif
Other DBs
NCBI-GeneID:
137610491
NCBI-ProteinID:
XP_068194161
LinkDB
All DBs
Position
17:9661934..9670499
Genome browser
AA seq
1165 aa
AA seq
DB search
MMLSGIFLLLMLWSCDSGRISVGHDDYTVYDLFDLIKVNKRHHGVTFVKGADPNIPAYRV
LNADLIPPVPDSYFRDLLDSIQAERGFLLLVSLKQSRKTRGSILTIEKNDGSGPIFEIIS
NGRDNTLDVVYSTMNEQQVASIDDANLATGHWKNITLFVQDDRVQLFVGCEDINVADMDL
PIHKVLSQDVADIATLRIGKAAVKDRFMGVLQNMRFMFGTTLDAILRNKGCESGATLTDF
LTLNNPVNTSSLAIGTDFNSHKDKDLESVCSFSCKEIALMFKELRGLDVFVKNLSTQLSK
VSRDNAELKIQVKHSAVCIHNGIVYNDNQNWTVDGCTECTCKNSATVCRKISCPLIPCAN
ATVPDGECCPRCGTPDWSPWSDWTPCSVTCGRGIQQRGRSCDRINSNCEGTSVQTRDCYP
QECDKRFKQDGKWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCEGEGRQNEVCK
KSPCPIDGGWGPWSPWNTCTVTCGGGIQIRKRRCSDPVPKYGGKDCGGGAAMSQVCNKQD
CPIDGCLSNPCFPGSKCTSFPDGSFKCGKCPLGYTGNGITCKDIDECKEVPDACHTFNGV
HRCENTDPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCKDGSHDCHRNANCIY
LGVYSDSMFRCECRPGYAGNGRICGEDTDLDGWPNMDLVCVENATYHCKKDNCPHLPNSG
QEDHDKDGLGDECDNDDDNDGILDDRDNCQRLYNPAQYDADRDDVGDRCDNCVFEANTDQ
TDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPLEHNPDQL
DTDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDNDGIPD
DKDNCRLAFNPDQVDSDGDGRGDVCKDDFDQDSVLDIDDVCPENFAISETDFRRFQMVPL
DPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFINTDRDDDYAGF
VFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRNALWHTGD
TAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNIYDKTYAG
GRLGLYVFSQEMVYFSDLKYECKDT
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtctggcatctttttgttgttgatgctttggagttgtgacagcggcagaata
tcagttggccatgacgattacactgtatatgacctatttgatctgatcaaagtaaacaag
agacaccatggagtgacttttgtcaaaggtgcagatcccaatatccctgcatacagggtt
ctgaatgctgacctgatccccccagtccctgacagctacttcagggacctcctcgactca
atccaggctgagaggggctttctcctcctggtcagcttgaagcagtccaggaaaaccaga
ggaagcattttgaccattgagaagaatgatggatctggacccatttttgagatcatttca
aatgggagggataacactctggatgtggtctactccaccatgaatgagcagcaggttgcg
tccatcgatgatgcaaatttggccactggccactggaaaaacatcacactgtttgttcag
gacgatagagtgcaacttttcgttggctgtgaggacatcaacgtagcagatatggatttg
ccaatccataaagtgctgtctcaggatgtggcagacattgctacactcaggattggaaag
gcggctgtgaaggacagattcatgggagtgcttcagaatatgcgattcatgtttgggacc
actctggatgccatattgagaaataagggatgcgagagtggagctactttgactgacttc
ttgactctgaacaacccagtaaatacctccagtcttgccattgggaccgatttcaacagt
cataaagacaaagatctagagtctgtctgcagcttctcttgcaaggagattgcccttatg
tttaaggaactcaggggactggatgtttttgttaaaaacctgtcaactcagctcagcaaa
gtgtctcgggataacgctgagctgaaaatccaagtcaaacacagcgcagtgtgcatccac
aatggcattgtgtacaatgataaccagaattggactgtggatggctgcactgagtgtacc
tgtaagaactctgctaccgtttgtcgcaaaatctcctgccctctgattccatgtgctaat
gccaccgtacctgatggagagtgctgccctcgctgtggaacacctgattggtctccctgg
tctgactggactccttgttcagtgacttgtggtcgcggaatccagcagcgtggacgctcc
tgtgaccgtatcaacagcaactgtgagggtacttctgtccaaacccgcgactgctaccct
caggaatgtgacaaacgcttcaaacaggatggtaaatggagccactggtctccctggtct
tcatgctctgtgacctgtggagagggggtcatcacccgcatacgactctgtaactcccca
acaccccagatgggtggtaaagactgtgagggagaaggacgtcaaaatgaagtctgcaaa
aagtctccttgtccaatcgatgggggttggggaccttggtcaccatggaacacctgcact
gtcacttgtgggggaggaatccagatccgcaaacgccgttgttctgacccagtgcctaaa
tatggaggaaaggattgtggtggtggtgctgctatgtcacaagtgtgcaacaaacaagac
tgcccaattgacggttgcctctcaaacccatgcttccctggctcaaagtgcaccagcttc
cctgatggctctttcaaatgtggcaagtgtccacttggctacactggaaatggcatcacc
tgcaaagacattgatgagtgtaaagaagtccccgatgcctgccatacatttaatggagtc
catcgctgtgagaacactgatcctggttacaactgtctgccctgccctgcgcgtttctct
ggtcctcagccctttggaagaggggtggaacaggcaactgccaaaaaacaggtttgcaaa
ccccgtaacccttgcaaggatggcagccatgactgccatagaaatgcaaattgcatctac
ttgggcgtctactcagattctatgttccgctgcgagtgcaggccaggatatgctgggaat
ggccgtatttgcggagaagatactgacctggatggttggcctaatatggacttggtgtgt
gtggagaatgccacttaccactgcaagaaggataattgtccccatcttcccaactctggc
caggaagaccatgacaaagatggcttgggtgatgaatgtgacaacgatgatgacaatgat
ggaatcctagatgatagagacaactgccaaagactctacaaccccgcccagtatgatgca
gacagggatgatgttggggatcgatgtgacaactgtgtgttcgaggccaacactgaccaa
actgacactgacaacaatggagagggtgatgcctgtgctgttgacattgatggcgatggt
attctgaatgagaacgacaattgtccctatgtttataatgtggaccagagagatactgac
agggatggagtgggagaccactgtgacaactgccctctggaacacaaccctgatcagctt
gacactgactcagatcgcgtaggagacaaatgcgacaacaaccaagacattgatgaggat
ggtcatcagaataacttggacaactgcccctatatacccaacgccaaccaggctgaccat
gacaaagatggaaaaggtgacgcctgtgaccatgatgacgacaacgacggcattcctgat
gacaaggacaactgcagactggcctttaaccctgaccaggtggactctgatggtgatgga
cgtggtgacgtgtgcaaagacgattttgaccaggatagtgttctggatattgatgatgtg
tgccctgagaactttgccatcagtgaaacagacttccgcagattccaaatggttcctctg
gatcccaagggtacctcacagattgatcccaactgggtggtccggcatcagggcaaggag
ttggtgcagactgtcaactgtgatcctggcattgctgttggttttgatgagttcagcgcc
gtggacttcagtggaactttcttcatcaacacagaccgagatgacgactatgctggtttt
gtgtttggttaccagtccagctcacgtttttacacagtgatgtggaaacagatcacacag
acctactggtctcacacacccacaagagctcaaggctactctggcttgtcaatcaaagtg
gtcaattctaccacagggccaggtgagcatctaaggaatgctctgtggcacactggagac
actgcaggacaggtgagaaccctgtggcatgaccccaagaacattggctggaaagacttc
actgcctacagatggcacctgacccacagacccaagactggacttattagagtggtcatg
tatgaaggaaagagaatcatggcagattctggaaacatctacgacaagacatatgctggt
ggtcgactaggcttatatgtcttctctcaggagatggtgtacttctcagacctcaaatat
gaatgcaaagatacataa
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