Antennarius striatus (striated frogfish): 137613226
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Entry
137613226 CDS
T10427
Symbol
thbs1b
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04115
p53 signaling pathway
astr04145
Phagosome
astr04148
Efferocytosis
astr04350
TGF-beta signaling pathway
astr04510
Focal adhesion
astr04512
ECM-receptor interaction
astr04518
Integrin signaling
astr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137613226 (thbs1b)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137613226 (thbs1b)
04518 Integrin signaling
137613226 (thbs1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137613226 (thbs1b)
04148 Efferocytosis
137613226 (thbs1b)
09143 Cell growth and death
04115 p53 signaling pathway
137613226 (thbs1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
137613226 (thbs1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137613226 (thbs1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
astr04131
]
137613226 (thbs1b)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
astr00536
]
137613226 (thbs1b)
Membrane trafficking [BR:
astr04131
]
Endocytosis
Phagocytosis
Opsonins
137613226 (thbs1b)
Glycosaminoglycan binding proteins [BR:
astr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137613226 (thbs1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
TSP1_ADAMTS
cEGF
EGF
TSP1_CCN
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
137613226
NCBI-ProteinID:
XP_068198365
LinkDB
All DBs
Position
19:complement(3718644..3729656)
Genome browser
AA seq
1169 aa
AA seq
DB search
MKLTGIFLLLMLWTCEGTRVAENRDDNSVYDLFELVKVPRKNHGVTLVKGDDPYSPAYKI
LNPDLIPPVPESALRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKKDGSGPVFEIVS
NGKANTLDIVYSTENKQQVVSIEDVDLATGHWKNITLFVQEDRALLYAGCEEVNNAELDA
PIQSILTQETPAGAQLRIGKGAVKDRFMGVLQNVHFVFGTTLDAILRNKGCQSSMTTDSM
ILENLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLISMFKELKGLGVVVKELSNELRQLTD
ENKLIKSRIGIHSGVCIHNGIVRKNTEEWTVDDCTECTCQNSATVCRKISCPLIPCANAT
VPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTR
DCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKNCEGEGRQT
EKCQKSPCPINGNWGPWAPWDTCSLTCGGGIQTRKRLCNDPVPKYGGKECVGDAKDSQMC
NKKTCPVDGCLSNPCFAGAKCTSFPDGSWKCGKCPAGYTGNGIKCKDLDECKEVPDACFE
FNGVHRCENTDPGYNCLPCPPRYSGPQPFGRGVEQATARKQVCTPRNPCLDGSHDCNKNA
RCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNL
PNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCPYNS
NPDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHN
PDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDND
GIPDEKDNCRLAFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQ
MVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNSVDFSGTFFINTERDDD
YAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALW
HTGHTAGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGLIRVVMYEGKKIMADSGSIYDK
TYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgactgggatatttttgctcttgatgctttggacctgcgaggggacgagggtc
gcagagaaccgggatgataacagcgtctatgacttgttcgagctggtcaaagtacccaga
aagaaccacggggtcaccctggtgaagggagacgacccgtacagccccgcctataagatc
ctcaaccctgacctgatccccccggtacccgagagcgccctgagggacctgatcgactcc
atccacgccgagaggggattcctcctcctgctcaacttcaagcagttcaaacggaccaga
ggaagcctcctgaccgtggagaagaaggacggctccggacccgtgttcgagatcgtctcc
aacggcaaggcgaacaccctggacatagtttactccaccgagaacaagcagcaggtggtt
tccatcgaagatgtggatctggctacgggtcactggaagaatatcacgctgttcgtacaa
gaggaccgggcgctgctctacgcgggatgcgaggaggtgaacaacgccgagctggacgcg
cccatccagagcatcctgacgcaggagactccggccggcgcgcaactcaggatcgggaag
ggagccgtgaaggacaggttcatgggcgtcctgcaaaacgtgcactttgtgtttggaaca
acactggacgccatcctgcgcaacaaaggatgccaaagctccatgacgacagattccatg
atcctggagaacctgaacggctcctcagccatcagaaccgagtacacgggacataagact
aaagacctgcagatggtttgtggcttctcctgcgaggacctgatcagcatgttcaaggag
ctgaagggcctcggcgtggtggtcaaggagctgtccaacgaactccgccaactgacggac
gagaacaagctgattaagtcccgtatcgggatccacagcggcgtctgcatccacaacggc
atcgtacgaaagaacacggaggagtggaccgtggacgactgcacagagtgcacctgtcag
aattctgctaccgtgtgccgcaaaatctcctgccccctaatcccctgtgctaatgctact
gttcctgatggagaatgctgcccacgctgtggaacaccgagcgactatgcggaggacggc
tggtcaccgtggtctgaatggacccattgttctgtgtcatgtgggcgtggcatccagcag
cgtgggcgctcttgcgaccgtatcaataacaactgcgagggcacctctgtacagacccgc
gactgctacctccaggagtgtgacaaacgcttcaagcaggatggcagctggagccactgg
tcaccctggtcatcctgttccgtcacctgtggcgctggtgtcatcacccgtatccgcctc
tgcaactcccccacccctcaacttgggggcaagaactgtgagggagagggccggcagact
gagaagtgtcagaagtctccatgcccgatcaatggaaactggggaccctgggcaccgtgg
gacacctgttctctcacctgtggaggtggcatccaaactcgtaaacgtctgtgcaatgac
cctgtaccaaaatatggtggcaaagagtgtgttggtgatgccaaggacagccagatgtgc
aataagaaaacctgcccagttgatggatgcctttcaaatccctgctttgctggagcaaaa
tgcaccagtttccccgatggttcttggaaatgtggaaaatgcccagctggctacactgga
aatggaatcaagtgcaaagatcttgatgagtgcaaggaggtcccagatgcttgctttgag
tttaatggtgtgcaccgctgtgagaacacggatcctggatacaactgtctgccttgccct
ccccgttactcaggaccccaaccctttggcagaggtgtggagcaggctactgccaggaaa
caggtgtgcacaccccgtaatccctgcctcgatggaagccacgactgcaacaaaaacgcc
cgctgcaactaccttggacactttgccgatcccatgtaccgctgcgagtgcaagcccggc
tacgctggcaatggtcatatctgtggagaggacacagatttggatggatggcccaatgct
gacttggtttgtgtggagaacgccacttaccactgcaaaaaggacaactgtcccaacctc
cccaattctggacaggaagattatgataaagatggcattggagatgcttgtgacaatgat
gatgacaatgatggcattcctgacgatagggacaactgtccatttgtgtacaatccaagg
cagtatgactacgaccgtgatgatgtgggtgatcgatgcgacaactgcccctacaatagt
aacccagaccaaacggacacagacaacaatggagagggagacgcttgcgctgtggacatt
gatggagatggcatactgaatgagaaggacaactgcccctatgtgtacaatgttgaccag
cgagatacagacctggacggagttggagacatgtgtgacaactgccctctggaacataat
ccagatcaggtggattcagacgatgaccgtgtgggagacaagtgtgacagcaatcaagat
attgacgaggatggacaccagaacaacctggacaactgcccatatatccccaacgccaac
caggctgaccatgataaggatggaaagggagacgcctgtgaccatgatgatgacaacgat
ggcatccctgatgaaaaagacaactgcaggctggcctttaaccccgaccaactggactct
gatggtgacggacgtggagatgcatgcaaagatgatttcgaccaagacaatgtgcctgac
atctacgacgtttgtccagagaactttgacattagtgagacagatttccgcaagtttcag
atggttcctctggaccccaagggtacctcacaaatcgatccaaactgggttgttcgccat
cagggcaaagaactggttcagactgtcaactgtgaccctggcattgctgttggttaccat
gagttcaattcagtggacttcagtggaaccttcttcattaacacagagcgggatgatgat
tacgctggctttgtgttcggctaccaatccagctctagattctatgttgtgatgtggaag
cagattacgcagacttactggtctaacaaacccaccaaggcccagggctactctggtctg
tccattaaagtggtcaactccaccactggcccaggagagcacctcaggaatgccctctgg
cacacagggcataccgcaggccaggtccgtaccctctggcatgaccctaagaatgttgga
tggaaagactttactgcttacagatggcatttgatccatagaccgagaacaggacttatt
agagttgtgatgtacgaaggcaagaagatcatggcggactctggaagcatttatgacaag
acatacgcaggcggcaggctaggtctttttgtattctcacaggagatggtatacttctca
gacctcaagtatgaatgcagagatgtctaa
DBGET
integrated database retrieval system
