Actinobacillus succinogenes: Asuc_2067
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Entry
Asuc_2067 CDS
T00558
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
asu
Actinobacillus succinogenes
Pathway
asu03030
DNA replication
asu03410
Base excision repair
asu03420
Nucleotide excision repair
asu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Asuc_2067
03410 Base excision repair
Asuc_2067
03420 Nucleotide excision repair
Asuc_2067
03430 Mismatch repair
Asuc_2067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asu03032
]
Asuc_2067
03400 DNA repair and recombination proteins [BR:
asu03400
]
Asuc_2067
Enzymes [BR:
asu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Asuc_2067
DNA replication proteins [BR:
asu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Asuc_2067
DNA repair and recombination proteins [BR:
asu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Asuc_2067
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asuc_2067
MMR (mismatch excision repair)
DNA ligase
Asuc_2067
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Asuc_2067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
HHH_3
BRCT_2
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ABR75413
UniProt:
A6VR16
LinkDB
All DBs
Position
complement(2273620..2275638)
Genome browser
AA seq
672 aa
AA seq
DB search
MTDIQNQINQLRNTLRHHEYQYHVLDNPEIPDSEYDRLFHRLKALEQQHPELISADSPTQ
RVGAKPLAGFAQITHELPMLSLDNVFSDEEFYAFVKRIQERLITLPDNLEFCCEPKLDGL
AVSILYENGRLVQAATRGDGTTGEDITLNIRTIRNIPLQLLTDNPPVRLEVRGEVFMPQE
GFDRLNEAALARGEKTFANPRNAAAGSLRQLDPKITSQRPLVWNAYSIGIAEGADLPPTH
YERLQWLKSIGIPVNGEIRLCRGAENVLKFYRTIQEKRPELGYDIDGTVLKVNEIALQER
LGFISKAPRWAIAYKFPAQEEMTVLNDVEFQVGRTGAITPVAKLQPVFVAGVTVSNATLH
NGDEIARLDIAIGDTVIVRRAGDVIPQIIGVVHDRRPPNAEPIIFPTLCPVCHSAIVRIE
GEAVARCTGGLFCDAQRKESLKHFVSRRAMDIDGVGAKLIEQLVDRELIRTPADLFKLDL
ITLMRLERMGEKSAQKALDSLEKAKKTTLARFIFALGIREVGEATALNLANFFKNLTALQ
TADLEQLQAVSDVGEVVANRIYVFWREQHNIDVVNDLIAQGVHWDDVEEKQVNENPFKEK
TVVLTGTLSQMGRNEAKALLQQMGAKVAGSVSAKTHIVIAGDSAGSKLSKAQDLGVAVMS
EAEFLEIVNSFS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatattcaaaaccaaattaatcagttgcgtaacaccttacgtcatcatgaatac
caatatcacgtgttggataatcctgaaattccggacagcgaatatgatcgtctgttccac
cggttgaaagccttagagcagcaacaccccgaattgattagcgccgattcgccgactcaa
cgggtcggggcgaagccgttggcgggatttgctcaaattacccatgaattgccgatgtta
tcgctggataacgttttttccgacgaagagttttacgcttttgtgaaacggattcaggaa
cgtctgataactttgcccgataatctggaattttgttgcgaaccgaaactggacggttta
gcggtgagtattttgtacgaaaacggcagattggttcaggcggcgacccgcggtgacggt
accacgggcgaagacattaccttgaacatccgcactatacgcaatattccgctgcagttg
ctgacggataatcctccggttcggcttgaggtgcggggtgaggtgtttatgccgcaggag
ggattcgacaggctgaatgaagccgcattggccagaggcgaaaaaacctttgccaatccg
cgcaatgcagcggcgggttcgttgcgtcagctcgacccgaaaattaccagtcagcgtccg
ttggtgtggaatgcgtacagtatcggcattgcggaaggggcggatttaccgccgacccat
tatgaacggttgcaatggttgaaatctatcggtattccggtgaacggggaaattcgcttg
tgtcgcggtgccgaaaacgtgctgaaattttaccgcactattcaggaaaagcgcccggag
ctgggatatgatattgacggcaccgtgttaaaagtgaacgagatagcgttacaggaacgc
ctcggttttatttccaaagcaccgcgttgggcgatagcctataaattcccggcacaggaa
gaaatgacggtactgaacgatgtggaatttcaagtgggacgcacgggcgctattacgccg
gtggcgaaactgcaaccggtttttgtcgcgggggtgacggtcagcaacgctacgctgcat
aacggcgatgagatcgctcgattggatatcgccattggcgatacggtcatcgttcgtcgc
gccggcgatgtgattccgcaaattatcggcgtggtgcatgatcgccgtccgcccaatgcc
gaaccgattattttcccgaccctttgtccggtgtgccattccgccattgtccgtattgaa
ggtgaggctgtggcgcgttgtaccggcggtttgttctgcgacgcacaacggaaagaatct
ttaaaacactttgtttcccgtcgggcgatggatattgacggcgtaggggcgaaacttata
gagcagctggtcgaccgggaattgattcgcaccccggcggatctgttcaaattggattta
atcacattgatgcgacttgaacgcatgggtgaaaaatccgcacaaaaagcgttggacagt
ctggaaaaagccaaaaaaaccacacttgcccgttttatttttgctcttggtattcgcgaa
gtcggcgaagcgacagcgttaaatctggcaaatttctttaaaaatctgaccgcacttcaa
accgcggatttagaacagttgcaggcggtgtccgacgtgggcgaagtggtggcgaaccgc
atttacgtcttctggcgtgaacagcataatatcgatgtggtgaatgatctgattgcgcaa
ggcgtacattgggacgacgtagaagaaaaacaggtaaatgaaaatccgtttaaagaaaaa
accgtcgtacttaccggcacgctgagccaaatggggcgtaatgaagccaaagctttgttg
cagcaaatgggggctaaagtggccggcagcgtatcagccaaaacccatattgtgatcgcg
ggagattccgccggttctaaattaagcaaagcgcaggacttaggcgttgcagtgatgagc
gaggcggaatttctcgaaattgtaaatagtttttcctaa
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integrated database retrieval system
