Arthrobacter sunyaminii: KG104_05515
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Entry
KG104_05515 CDS
T08124
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
asun
Arthrobacter sunyaminii
Pathway
asun03030
DNA replication
asun03410
Base excision repair
asun03420
Nucleotide excision repair
asun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KG104_05515 (ligA)
03410 Base excision repair
KG104_05515 (ligA)
03420 Nucleotide excision repair
KG104_05515 (ligA)
03430 Mismatch repair
KG104_05515 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asun03032
]
KG104_05515 (ligA)
03400 DNA repair and recombination proteins [BR:
asun03400
]
KG104_05515 (ligA)
Enzymes [BR:
asun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
KG104_05515 (ligA)
DNA replication proteins [BR:
asun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KG104_05515 (ligA)
DNA repair and recombination proteins [BR:
asun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
KG104_05515 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KG104_05515 (ligA)
MMR (mismatch excision repair)
DNA ligase
KG104_05515 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KG104_05515 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
BRCT_2
Zn_ribbon_TFIIB
DNA_meth_N
HHH_8
DUF8512
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QWQ37900
UniProt:
A0A975S8T7
LinkDB
All DBs
Position
1260017..1262224
Genome browser
AA seq
735 aa
AA seq
DB search
MDTAAAVESVSTDTPPSDNLREEYQDLADQVRKYRFAYYNEDAPLVSDAEFDELYRRLEE
LEALHPELVTNDSPTQEVGGEISAAFTPVEHLQRMYSLEDVFSLDELDAWVRKAEASVAN
IAPDAKIKWLTELKIDGLAVNLLYRNGELVRAATRGDGTTGEDITHNVLTIKSIPRVLTG
EDIPAEMEIRGEVFIPSKEFARLNESMVEAGKAPFANPRNAAAGSLRQKDPEVTARRPLS
MYVHGIGAREGLSAASQSETYELLKQWGLPTSPYYKVLDSYDEVLNYIAVNGEHRHDLSH
EIDGIVVKVDDFALQRALGHTSRVPRWSVAYKYPPEEVNTKLLDIRVNVGRTGRVTPYGM
MTPVSVSGSTVEMATLHNQDVVKAKGVKIGDTVVLRKAGDVIPEIVGPVVALRDGSERDF
VMPTHCPSCGTELKPAKEGDVDIRCPNAKSCPSQLRERVFHLAGRGAFDIEALGWEAAIA
LTQPTEPQIPPLTSEAGLFDLKVEDLADVRIERPKRVKGVVDGTELVPYFYSKGTAKKPS
EPTATTRKLFTELEKAKTQPLWRVLVALSIRHVGPTAARALATAFGSMDAIRAASEEQLA
HVDGVGPTIAAALTEWFAEDWHREIVDRWAAAGVRMADERDETMPRTLEGMTIVVTGTLP
NFSRDEAKEAIITRGGKASGSVSKKTDYLVAGENAGTKLDKAESLGVPVLDEDGFRALLD
GTLSEEDTRQEEGTA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcagccgccgtcgaatcggtcagcactgacaccccgcccagcgacaacctg
cgggaggaataccaggatcttgcggaccaggtgcgcaaataccgtttcgcgtactacaac
gaagacgctccgctcgtctccgatgcggagttcgacgaactgtaccggcggctcgaggaa
cttgaagcgctgcatccggaactggtcaccaacgattcgcccacccaggaagtcggcggg
gagatctcagcggcgttcactccggtggagcatcttcagcgcatgtacagcctggaggat
gtcttctcgctggatgaactggacgcctgggtgcgcaaggccgaagcgtccgtggcgaac
attgcccctgacgccaagatcaagtggctgacggagctcaagattgacggcctggccgtg
aatcttctctaccgcaacggggagcttgtccgggcggccacccgcggcgacggcaccacc
ggtgaggacattacgcacaacgtgctcacgatcaaatccatcccgcgggtgctcacggga
gaggacatccctgcggaaatggaaatccgcggggaggtcttcatcccctccaaggagttt
gcccgcctgaacgagtccatggttgaagccgggaaggcgccgttcgcgaacccgcgcaac
gccgccgccggatcgctgaggcagaaggatcccgaagttactgcccggcgcccgctgagc
atgtatgttcacggcatcggcgcccgtgagggattgtcggctgccagccagtccgaaacc
tacgaactgctgaagcagtggggcctgccgacgtcgccgtattacaaggtcctggacagc
tacgacgaagtgctcaactacattgccgtgaacggggagcaccgccacgacctctcgcac
gagatcgacggcattgtggtcaaggtggacgacttcgccctgcagcgcgccctcggccac
acctcgcgggtgccgcgctggtccgttgcctacaagtacccgccggaggaagtgaacacc
aagctcctggacatccgggtgaacgtgggccgcaccggccgcgtcacgccctacgggatg
atgactccggtctccgtttccggctccaccgtggaaatggcgacgctgcacaaccaggac
gtggtcaaggcgaagggtgtgaagatcggcgacaccgtggtgctgcgcaaggccggtgac
gtgattccggaaatcgtgggtcccgtcgtcgccctccgggacggcagcgaacgggacttc
gtgatgcccacgcactgcccttcctgcggcacggaactgaaaccggcgaaggaaggggac
gtggatatccgctgccccaacgccaagtcctgcccttctcagctgcgcgagcgtgtgttc
catctggccggccgcggtgctttcgatattgaagcgctcggctgggaggcggccattgcc
ctgacgcagcccaccgagccccagatcccgccgctgaccagtgaggccggcctgtttgac
ctcaaggtcgaggatctggccgatgtgcggattgaacgccccaagcgggtgaagggcgtg
gtggacggcaccgaactggttccgtacttctattccaagggaacggccaagaagccctcc
gaacccaccgccaccacccgcaagctctttaccgagctggagaaggccaagacccagccg
ctgtggcgggtgctggtggcgctgtcgattcggcatgtgggcccgacggcggcccgcgcg
ctggccaccgcgtttggttccatggacgctatccgtgccgcctcggaagagcagctggcc
catgtcgacggcgtgggccccaccatcgcggcggccctgaccgagtggttcgccgaggac
tggcaccgcgagatcgtggaccgctgggccgccgccggcgtgcggatggctgacgaacgt
gacgaaacgatgccccgcacccttgaaggcatgaccattgtggtcaccggaaccctgccg
aacttcagccgtgacgaggcaaaggaagccatcatcacccgcggaggaaaggcctccggg
tcggtctccaagaaaaccgactatctggtggcgggggagaacgcgggcaccaagctggac
aaggcggagtccctcggtgtgccggtgctggatgaagacggcttccgcgcactgctggac
ggcaccctgtcggaggaggacacacggcaggaagagggcacggcatga
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