Acetobacter oryzifermentans: WG31_00610
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Entry
WG31_00610 CDS
T04478
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
asv
Acetobacter oryzifermentans
Brite
KEGG Orthology (KO) [BR:
asv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asv03016
]
WG31_00610
Enzymes [BR:
asv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
WG31_00610
Transfer RNA biogenesis [BR:
asv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WG31_00610
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ANA14830
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All DBs
Position
132721..133929
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AA seq
402 aa
AA seq
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MARSATPAFPPARLISSTQELEAALAPFHNESFVTVDTEFMREQTYWPELCLVQIGATHD
IVLIDALAEGIDLTPLKNLFADTAVLKVFHAARQDLEIFLHLFGALPTPLFDTQVAAMVA
GFGDQVGYDSLVGSLTGHMIDKSHRFTDWSVRPLSPAQLTYAAGDVTWLRLVYERLVKKL
EQEQRLDWVAAEMAELEDPATFRPDPEKQWERLRARTNNRRMLAVLRAIAALREREAQRV
NVPRQRLVKDESLLEIAATTPSTPEALTRVRGVSRGLAEGRTGHALLQAIKQAQALPDSE
LPRSPRGKSKDTPRPSASLVALLKVLLTSCCEKHDVAPRLVASADDLDALALDPSQPHAV
LAGWRRKVFGETAQALCEGKIALCVKSGRVVAIPQNMDVPSA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccagatcagcaacacctgcatttcctcccgcacgtcttatttcctctactcaggag
ttagaggcggctcttgcacctttccataatgaaagcttcgtaacggttgatacggagttt
atgcgggagcagacatactggccggaactctgcctggttcagattggcgcaactcatgat
atcgtgctgatagatgcgctggctgaaggtattgaccttaccccgctgaaaaatcttttt
gcagatacagcggtgctcaaggtgtttcatgctgcccggcaggatctggaaatttttctg
catctgtttggtgccttaccgactccgctttttgatacgcaagtggcggcaatggtggcc
gggtttggagatcaggttgggtatgacagtctggttggctctcttactgggcatatgatt
gataaaagccaccgttttacagattggtctgtacgccccctgtctcctgctcagcttaca
tatgctgcaggcgatgtaacgtggctgcgcttggtttatgaacggcttgttaaaaaactg
gagcaggaacagcgtttggattgggttgcggcagaaatggccgagctggaagatccagcc
acatttcgtcccgatcctgaaaaacagtgggagcgtttacgcgcccgcaccaataaccgg
cgtatgcttgctgttttgcgtgccattgcagctttgcgtgagcgggaagcgcaacgggta
aatgttccgcgccaacggcttgtgaaagatgagagtctgctggaaattgctgcaacgact
ccttcaactcccgaagctttaacccgtgttcggggtgtttctcgcgggttggcagaaggg
cgtacagggcacgccttgttgcaagctatcaagcaggcacaggctttgccagactcggag
ctgccgcgttctccgcgtggcaaaagcaaagatacgccacggccttctgcatcgttggtg
gcattgttgaaggtgcttttaacatcttgctgtgaaaagcacgatgtcgccccgcgtttg
gtggcctctgctgatgatctggacgccttggcgttagatccttctcagcctcatgccgtg
ttggccgggtggcggcgcaaggtgtttggtgaaacagcgcaggctttgtgcgaagggaaa
atagccttatgcgtaaagtctggccgcgttgtggctattccgcagaatatggatgtgcct
tccgcttaa
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