Acetobacter oryzifermentans: WG31_05155
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Entry
WG31_05155 CDS
T04478
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
asv
Acetobacter oryzifermentans
Pathway
asv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WG31_05155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asv03021
]
WG31_05155
03400 DNA repair and recombination proteins [BR:
asv03400
]
WG31_05155
Enzymes [BR:
asv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WG31_05155
Transcription machinery [BR:
asv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WG31_05155
DNA repair and recombination proteins [BR:
asv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WG31_05155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Biotin_lipoyl_2
Apocytochr_F_C
DUF5789
Motif
Other DBs
NCBI-ProteinID:
ANA13472
UniProt:
A0ABM6AIJ5
LinkDB
All DBs
Position
1058060..1062235
Genome browser
AA seq
1391 aa
AA seq
DB search
MNELMKILGQTGQAMTFDQIKIQLASPEQIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIICEKCGVEVTLAKVRRERMGHIQLASPVAHIWFLKSL
PSRIGLMVDMTLKDLEKVLYFESYLVLEPGTSPLKQYSLLTEEQYLDAMDEYGDEGVEVG
IGAEAIKKVLERIDCDAEKVELRQELKETTSEAKRKKLVKRLKLIEAFAESGSRPEWMIL
DLVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QEAVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYAKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLETPEFKLTPDRCEYDEKTGALVKE
GAPSFSSIGEVEYALSAGALKLHDKIRARFQKVGADGKVTYETAVTTPGRVLIAQILPQH
EAVPFSLINRQLTKKAVSDVIDTVYRHCGQKEAVIFCDRLMALGFRHAAKAGISFGKDDM
IIPPEKKELVDRTAAEVKEFEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMTKEISRQ
EVGKQINSVWMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIEQPIIANFKEGLSVLDYF
TSTHGARKGLADTALKTANSGYLTRRLVDVAQDSIIIEEDCGSERGLTVRAVMDGGEVVA
SLSERILGRTVASDVVAPGTNEVIVPRNHLIDEADAERIEKSGVETVHIRSVLTCDSRVG
VCGHCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSMIEAS
RDGQVVIRNRNVVHNSQNVPIVMARNCEILLSDENGVEKARYRVPYGARLLTEEGAKVAR
GQKLAEWDPYTLPIITEKAGKVEYLDLIDSITLVERMDEVTGLTSKVVVDYKQAGKGVDL
RPRLQLKDANGDVVKLDNGSDARYFLSPETLLSVENGTEVNAGDVLARLPREGSKTRDIT
GGLPRVAELFEARRPKDHAIIAEMEGRVEFGKDYKSKRRVIVKNDETGEEQEYLIPKGKH
ISVQEGDFVEKGDPLVDGPRVPHDILKVMGVEALSDYLINEIQDVYRLQGVKINDKHIEV
IVRQMLQKVEILEPGDTTYLIGETVDRIEFEAENAKSLKAGERPAQGMPVLQGITKASLQ
TQSFISAASFQETTRVLTEAATAGKVDKLMGLKENVIVGRLIPAGTGSVMKRLRAIAAEQ
DRQRVGRSAAE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagctcatgaaaattcttggccagaccggccaggcgatgacatttgatcagatt
aagattcagctggcatcgcccgaacaaatccgttcctggtcttatggcgaaatcaagaag
cccgagaccatcaactatcgtacgttcaagccagaacgggatggcctgttctgtgcgcgt
atttttggtccgatcaaggattatgaatgcctttgcggtaaatacaagcggatgaaattc
cgcggtattatctgcgaaaagtgcggtgttgaagttacgctggccaaagtgcgtcgtgag
cgcatgggccatattcagcttgccagccccgttgcccatatctggttcctgaagtctctg
cccagccgtatcggcctgatggttgatatgacgctgaaagatctggaaaaggtgctttac
tttgaaagctacctggttctggaacccggcacgtctccgctgaagcagtattccttgctg
acggaagaacagtaccttgatgccatggatgaatatggtgatgaaggtgttgaagttggt
attggcgcagaagccattaaaaaggttctggaacgcattgattgtgatgccgaaaaggta
gaactgcgtcaggaacttaaggaaacaacttcagaagccaagcgcaaaaagcttgttaag
cgcctgaagctgattgaagcgtttgcagaaagcggctcacgtccagaatggatgattctg
gatctggttccggttattccgccggatctgcgtccgctggtgccgctggatggcggtcgt
tttgcaacgtctgacctgaacgatctgtatcggcgtgttatcaaccgtaataaccgtctg
aagcgcctgatggaactgcgtgcgcccgatattatcgtgcgtaacgaaaagcgtatgctg
caggaagctgtggatgcgttgttcgataacgggcgtcgtggccgtgcgattacgggtgct
aacaagcgcccgctgaaatctctttccgatatgcttaaaggtaagcaggggcgtttccgt
cagaacctgcttggtaagcgcgtcgattactctggccgttctgttattgtggtggggccg
gagcttaagctccatcagtgtggtcttcccaaaaagatggcgctggagctgttcaagccg
ttcatttacgccaagctggaaaaatacggtcatgctaccaccattaaagctgcaaagcgg
atggtggaaaaagagcgtccagaagtttgggatattcttgaagaagttatccgcgaacat
cctgttatgcttaaccgtgcgcctacgttgcatcgcctgggtattcaggcgtttgaaccg
gtgctggttgaaggtaaggccattcagctgcatccgctggtctgcaccgcgtttaacgca
gactttgacggtgaccagatggccgtgcatgtgccgctgagccttgaagcccagcttgaa
gcacgtgtgctgatgatgtccaccaacaacatcctcagcccagcaaatggtaagccgatt
atcgtgccttctcaggatatcgttttggggctgtattatctcagcctcgaaacacctgaa
ttcaagcttacgccagatcgctgtgaatatgatgagaagacaggcgctctggtcaaagaa
ggcgcgccatctttctcttctattggtgaagtggaatacgcactcagcgccggtgcactg
aagctgcatgataaaattcgcgcacgtttccagaaggtcggtgcggatggcaaggtcacc
tacgaaacagccgtgaccacgcctggccgtgtgttgattgcgcagatcctgccgcagcat
gaagctgtgccgttctccctcatcaaccgccagctcaccaaaaaggccgtgtctgacgtt
attgatacggtgtatcgtcattgtggtcagaaagaagcggttatcttctgtgatcgtctg
atggctctgggtttccgtcatgctgccaaggctggtatttcctttggtaaggatgacatg
atcatcccgcctgaaaagaaagaactggttgatcgcacggctgccgaagttaaagagttt
gaacagcagtatcaggatggtctgatcacggctggcgaacgctacaataaggtggtggat
gcgtggtctcgttgcacagacgaagtgcaggcggccatgaccaaagaaatttctcgtcag
gaagttggtaagcagatcaactcggtgtggatgatgagccactccggggctcgtgggtcg
ccggctcagatgaaacagctggccggtatgcgtggtctgatggccaagccatctggtgaa
attattgagcagccgattattgccaactttaaagaaggcctgtcggttctcgattacttc
acctctacccatggtgcacgtaaaggtctggctgataccgcgctgaaaaccgctaactct
gggtatctcacccgtcgtctggtggatgtggcgcaggacagcatcattatcgaagaagat
tgtggtagtgaacgcggcctgacggtgcgtgcggtaatggatggtggggaagttgtagct
tctctctccgaacgtatccttggccgtacggttgcttccgatgtggtagcgccaggtacc
aacgaagtgatcgttccgcgcaatcatctgattgatgaggccgatgccgagcggattgaa
aaatctggtgtggaaacggttcatatccgttctgtcctgacctgtgatagccgtgttggt
gtatgtggtcactgctatggtcgtgatcttgcacgcggcacaccggttaacatcggtgaa
gccgtgggtgttatcgccgctcagtccattggtgagcccggcacacagctgacaatgcgt
accttccatattggtggtgcggcgcagcgtggtgcggaacagtccatgatcgaagcctct
cgtgatggtcaggtcgtaatccgtaaccgtaacgttgtgcataatagtcagaacgtgccg
atcgtgatggcacgtaactgtgaaattcttctgtctgacgaaaacggtgtggagaaagcc
cgttaccgtgtgccgtacggtgctcgtttgttgacagaagaaggggcaaaagttgctcgc
ggtcagaaactggctgagtgggatccgtacacccttccgattatcacggaaaaagctggt
aaggttgaatacctggatctgattgactccatcacgcttgttgagcgtatggacgaagta
acaggcctgacctccaaagtggtggttgactataagcaggcaggtaaaggtgtggatctg
cgcccacgtctgcagcttaaggatgccaacggtgatgtggtgaagttggataacggttca
gatgcccgttacttcctctctcccgaaacgcttctgtctgttgaaaacggtacagaagta
aatgccggtgacgttctggcgcgtctgccacgtgaaggctccaaaacccgtgatattacg
ggtggtctgccccgcgttgctgaattgtttgaagcacgtcggccaaaagaccacgctatt
atcgcggaaatggaagggcgcgttgaattcgggaaagattacaaatccaagcgccgtgtt
atcgtgaagaacgatgaaacgggcgaggagcaggaatacctgatcccgaaaggcaagcac
atttccgttcaggaaggtgactttgtggaaaaaggtgatccgctggtcgatggtccgcgg
gtgccccacgatatcctgaaggtgatgggtgtagaggctctgtctgattacctgatcaac
gaaattcaggatgtgtatcgtcttcagggtgtgaagattaacgataagcatattgaagtt
atcgtgcgtcagatgcttcagaaggtagaaattctggagccgggtgatacgacatatctg
attggcgaaactgttgaccgtattgagttcgaggctgaaaatgccaagagcctcaaagca
ggtgagcggccagctcagggtatgccggtgctgcagggcatcaccaaggcttctctgcag
acgcagtcctttatttctgctgcatcgttccaggaaaccacacgcgtgctcacagaagct
gctacggcagggaaagtggataagttgatgggcctgaaggaaaacgtaattgttgggcga
ctgattccagcaggtacgggcagtgttatgaagcgtctgcgggctattgccgcagagcag
gatcgccaacgtgttgggcgttctgcagccgaataa
DBGET
integrated database retrieval system
