Acetobacter oryzifermentans: WG31_06810
Help
Entry
WG31_06810 CDS
T04478
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asv
Acetobacter oryzifermentans
Pathway
asv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WG31_06810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asv03019
]
WG31_06810
03400 DNA repair and recombination proteins [BR:
asv03400
]
WG31_06810
Enzymes [BR:
asv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WG31_06810
Messenger RNA biogenesis [BR:
asv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WG31_06810
DNA repair and recombination proteins [BR:
asv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WG31_06810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANA13764
UniProt:
A0ABC8CDB3
LinkDB
All DBs
Position
complement(1402834..1404714)
Genome browser
AA seq
626 aa
AA seq
DB search
MTETGSISTPSQFSHSRLERDRFAGKPPQEVLQAVFGFPGFRSLQAQAVECVMEGRDTLV
LMPTGGGKSVCYQIPALCREGMGLVISPLIALMDDQVAGLRQLGINAAALHSELEGDEAA
KIRSDLANGRIDLLYISPERLLSSGTLDRLVRIPLSVIAIDEAHCISAWGHEFRPEYRAL
TALPRHFPHVPRIALTATADERTREDILTALDMPHAEVLVSSFHRPNLNISVQPKASETR
QLITALERHKDAASIVYCGSRARTERMAASLRERGWPALAYHAGLSPIEKRAALLRFRSG
EPLVIVATVAFGMGIDRPDVRAVVHLDMPSSPEAYYQQIGRAGRDGLPSDTLLLYGGEDM
ARARYWLDQSAAPESEKRIMRSRLEAMIALTETTGCRTRALLHCFGEELAEPCGHCDNCL
HPVLTFDGTEAARKLLSAVYRTGQCFGALHVISVLRGKTTEAVKRNGHDKLTVWGIGKDK
SEQFWRGVVRQLIARGALRTEGQYGGLILNQNVARPILRGEEDIHLRADPVVETASRISD
RSSQSAGITLTEDSKALFDALRQWRREEAQEQEIPPYVIFHDSVLRDIAMEKPSDLDELG
DIKGVGRSKLERYGEAVLEVLETAQA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaccggctccatatccacgccctctcagttttcacatagcaggctggaacgg
gatcggtttgctggcaaaccgccgcaggaggttctgcaggcggtttttggctttccgggt
ttccgcagccttcaggcgcaagccgttgaatgcgttatggaaggcagagatacactggtg
cttatgccaaccggcggcggcaaaagtgtttgttaccaaatacccgccctgtgccgcgaa
ggcatggggctggttatttccccccttattgcccttatggatgatcaggttgcaggcctg
cgccaacttggcatcaatgcagcggcccttcattctgaactggaaggggatgaagccgcc
aaaatcagatccgatctggcaaatgggcggatagacctgctgtatatttccccagaacgg
ctgctttcatccggcacgctggacaggcttgtgcgcataccgctttcggttatcgctatt
gatgaggctcattgtatttcggcatgggggcatgagttccggccagaataccgcgccctt
acagcgttgccacgccattttccgcatgtgccacgtattgcccttaccgctaccgcggat
gaacgcacgcgagaagatattctaacagcgctggatatgccgcatgccgaggtactggtt
tccagctttcatcggcctaatctcaacatttccgtgcagcccaaagcgtctgaaacccgc
cagcttattacagcactggagcggcataaggatgccgccagtattgtatattgtggcagc
cgtgcccgcacagagcgcatggccgcttctctgcgtgaacgcgggtggcctgccttggcc
tatcacgccgggctttcccccatagaaaaacgtgccgcgctcctgcgttttcgatctggt
gaacctcttgttattgttgccactgtcgcctttggcatgggcatagataggccagacgtg
cgcgctgtcgtgcatctggacatgccatcctcgccagaggcctattatcagcaaattggt
cgggcagggcgcgatggcctgccatctgacacacttctgctgtacggcggggaggacatg
gctcgcgcccgttattggctggatcaatccgccgcaccagaaagcgaaaaacggattatg
cgcagccgactggaagccatgatcgcactaaccgaaaccacgggttgccgcacccgtgcg
ttattgcattgttttggtgaggaattggccgaaccctgcggccattgcgataactgccta
catccggtgctaacatttgatggcacagaagccgcccgcaagctgctttctgctgtgtat
cgcactgggcaatgttttggtgcgctacatgttatcagtgtgctgcgcggcaaaaccaca
gaagccgttaagcgtaatgggcatgacaagctgactgtgtggggtattggtaaggataaa
agcgagcagttctggcgcggcgtggtacgtcagcttattgcgcgtggggccttgcgcaca
gaaggccaatacggcggcctgattttaaaccagaatgtagcgcgccccattttacgcggt
gaggaagacattcacctacgtgcagatcctgtagtggaaacagccagccgcatatcagac
cgcagcagccaaagcgcaggcattacccttacggaagatagcaaagccctgtttgatgcc
ctacgccaatggcgccgggaagaagcgcaggagcaggaaattccgccttacgttattttc
catgattccgtgctgcgcgatatcgccatggaaaaaccctcagatttggatgaactggga
gatatcaaaggggtagggcgctccaaactggaacggtatggagaagccgtgctggaggtt
cttgagacagcgcaggcatga
DBGET
integrated database retrieval system
