Acetobacter oryzifermentans: WG31_12065
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Entry
WG31_12065 CDS
T04478
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asv
Acetobacter oryzifermentans
Pathway
asv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WG31_12065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asv03019
]
WG31_12065
03016 Transfer RNA biogenesis [BR:
asv03016
]
WG31_12065
Enzymes [BR:
asv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WG31_12065
Messenger RNA biogenesis [BR:
asv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WG31_12065
Transfer RNA biogenesis [BR:
asv03016
]
Prokaryotic type
tRNA degradation factors
WG31_12065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
CCDC47
RecX_HTH3
Motif
Other DBs
NCBI-ProteinID:
ANA14620
UniProt:
A0ABM6ALL5
LinkDB
All DBs
Position
complement(2548829..2550979)
Genome browser
AA seq
716 aa
AA seq
DB search
MFNYFRKEIEWGGRPLILETGKVARQADGAVMVTYGETVVLCTAVGAKEVKPGQDFFPLT
VNYQEKAYAAGKIPGGFFKREGRPSENETLVSRLIDRPLRPLFPEGFRNEVQVIATVLTH
DMENDPSIPALIGCSAALTLSGIPFFGPVGAARVGFKDGAFILNPTQEQIKESDLELVVA
GTAEGVLMVESEASELSEEVMLDAVTFGHTAFQPVLDAIISLAEHAAKEPWALAEPTKEE
IQLRKQVEKAGRKLIADAYKEKQKQVRYEKLKAARAAIVEKLTADELDVAAAKPMIKDLE
ADVVRSSVLKTGKRIDGRDLVTVRPIVPEVGVLPRVHGSSLFTRGETQALVVTTLGTGQD
EQVIDALEGEYRTNFMLHYNFPPFSVGECGRIGSPGRREIGHGKLAWRAIHPLMPSRKEF
PYTVRVVSEITESNGSSSMATVCGGSLALMDAGVPLKRPVAGIAMGLIKEGDDFAVLSDI
LGDEDHLGDMDFKVAGTEQGVTALQMDIKITSITPEIMKIALGQARDGRMHILGEMSKAL
TETRTNVSSTAPKITTMKVPREKIRDVIGSGGKVIREIVEYSGAKVDIGDDGTITIAAAS
DDQAQKAIDRINGIVAEPELGRIYDGKVVKTADFGAFVNFLGARDGLVHISELAQGRVGK
TTDVVKEGDTVKVKVIGFDDRGKVKLSMRVVDQNTGADITETVGEKPSRGPRRDAE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactacttccgtaaagagattgaatggggcggtcgcccgctgattctggaaacc
ggcaaagttgctcgtcaggctgatggcgccgtgatggtcacttacggtgaaaccgttgtg
ctgtgcaccgctgttggtgcaaaagaggtaaagcccggtcaggactttttcccgctgaca
gttaattatcaggaaaaagcttacgctgcaggtaagattcccggtggtttctttaagcgt
gaaggccgtccttctgaaaatgaaacactggtttcccgcctgattgaccgcccgctgcgt
ccgctgttccctgaagggttccgcaacgaagtgcaggtaattgcaactgtgctgacgcac
gatatggaaaatgatccttccattcctgcgctgatcggctgttctgccgctctgactttg
tctggtattccgttctttgggcccgttggcgcagcccgcgttggctttaaggatggcgca
ttcatcctgaacccgacacaggaacagatcaaagaatcagatctggaactggttgtggct
ggcacggcagaaggcgtgctgatggtggaatccgaagcttccgaactgtctgaagaagtt
atgctggatgccgtaacgttcggccatacagcattccagccggttctggatgccattatc
tccttggcagagcacgcagccaaggaaccatgggcactggcagagcccaccaaggaagaa
attcagctgcgcaagcaggtggaaaaagctggtcgcaagctgattgctgatgcttacaag
gagaagcagaagcaggtgcgctacgaaaagctgaaagcagcacgtgcagccattgttgaa
aagctaactgctgatgaactggacgttgcagccgccaagccgatgatcaaggatctggaa
gctgatgttgtgcgctcttccgttctgaaaaccggcaagcgtattgatggtcgtgatctg
gtaactgtccgtccgatcgtgccggaagttggtgttctgccgcgcgtacatggctcttct
ctgttcactcgtggtgaaacgcaggcgctggttgtgaccacgctgggtacagggcaggac
gaacaggttattgatgcgctggaaggtgaataccgcaccaactttatgctgcattataac
ttcccacccttctctgtgggggaatgtgggcgtatcggttctccgggccgtcgtgaaatc
gggcatggcaagctggcatggcgcgctattcacccgctgatgccttcccgcaaggaattc
ccatacacagtgcgcgtggtttccgaaattacggaaagcaacgggtcttcttccatggca
actgtatgcggtggctctctagctctgatggatgctggtgtgccgttgaagcgtccggtt
gctggtattgctatgggtctgatcaaggaaggcgatgatttcgctgttctgtctgatatt
cttggcgatgaagatcatcttggggatatggacttcaaggtggctggcaccgaacagggt
gtgacagccctgcagatggatattaagattacttccatcacgccggaaatcatgaagatt
gctttgggtcaggctcgtgatggccggatgcatattttgggtgaaatgagcaaggcgctg
acagaaacacgcaccaacgtgtcttccacagcaccgaagatcaccaccatgaaggtgcct
cgggaaaagatccgtgatgtgatcggctctggcggtaaagtgatccgcgaaatcgtggaa
tattctggcgccaaggttgatattggggatgacggcacaatcaccattgccgccgcttct
gatgatcaggcacagaaggctattgaccggatcaacggcattgtggcggaaccggaactg
ggccgcatttacgatggtaaggttgttaaaactgccgattttggtgcgtttgtaaacttc
cttggtgcacgtgatggcttagtacatatttccgaactggcgcagggccgcgttggtaaa
accacggatgtggtgaaggaaggcgataccgtgaaggttaaggtcatcggctttgatgat
cgcggtaaggttaagctgtccatgcgtgttgttgatcagaacacgggtgcggatatcacg
gaaactgtgggtgaaaagccctcacgtggcccccgtcgggatgctgaataa
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