Acetobacter oryzifermentans: WG31_13050
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Entry
WG31_13050 CDS
T04478
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
asv
Acetobacter oryzifermentans
Brite
KEGG Orthology (KO) [BR:
asv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asv03032
]
WG31_13050
03036 Chromosome and associated proteins [BR:
asv03036
]
WG31_13050
03400 DNA repair and recombination proteins [BR:
asv03400
]
WG31_13050
DNA replication proteins [BR:
asv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
WG31_13050
Chromosome and associated proteins [BR:
asv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
WG31_13050
DNA repair and recombination proteins [BR:
asv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
WG31_13050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
VWA_3
HU-HIG
HU-CCDC81_bac_2
DUF7406
Motif
Other DBs
NCBI-ProteinID:
ANA14787
UniProt:
A0ABC8CET6
LinkDB
All DBs
Position
complement(2766460..2766729)
Genome browser
AA seq
89 aa
AA seq
DB search
MSKAFIAAVIQDSINCTGVAANQAANDLIDAIVEELKREGGFTLPSFGTFTVRKTKARKA
LNPRTGEQVKVKAGKTVRFKASPNLKKAV
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggcctttattgcagcagtgatccaggactcgatcaactgcaccggcgttgcc
gccaatcaggcagcgaatgaccttattgatgcgattgtagaagaactgaagcgtgaaggt
ggttttacacttccttctttcggaacgtttacagtgcgtaagaccaaagctcgtaaggcc
ttgaaccctcgcacgggtgagcaggtaaaggtcaaagctggtaaaacggtacgttttaaa
gcaagcccgaatctgaaaaaggctgtttaa
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