KEGG   Apodemus sylvaticus (European woodmouse): 127669421
Entry
127669421         CDS       T10613                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, I-E beta chain-like
  KO
K06752  MHC class II antigen
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04145  Phagosome
asyl04514  Cell adhesion molecules
asyl04612  Antigen processing and presentation
asyl04640  Hematopoietic cell lineage
asyl04658  Th1 and Th2 cell differentiation
asyl04659  Th17 cell differentiation
asyl04672  Intestinal immune network for IgA production
asyl04940  Type I diabetes mellitus
asyl05140  Leishmaniasis
asyl05145  Toxoplasmosis
asyl05150  Staphylococcus aureus infection
asyl05152  Tuberculosis
asyl05164  Influenza A
asyl05166  Human T-cell leukemia virus 1 infection
asyl05168  Herpes simplex virus 1 infection
asyl05169  Epstein-Barr virus infection
asyl05310  Asthma
asyl05320  Autoimmune thyroid disease
asyl05321  Inflammatory bowel disease
asyl05322  Systemic lupus erythematosus
asyl05323  Rheumatoid arthritis
asyl05330  Allograft rejection
asyl05332  Graft-versus-host disease
asyl05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127669421
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127669421
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    127669421
   04612 Antigen processing and presentation
    127669421
   04658 Th1 and Th2 cell differentiation
    127669421
   04659 Th17 cell differentiation
    127669421
   04672 Intestinal immune network for IgA production
    127669421
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    127669421
   05164 Influenza A
    127669421
   05168 Herpes simplex virus 1 infection
    127669421
   05169 Epstein-Barr virus infection
    127669421
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    127669421
   05152 Tuberculosis
    127669421
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    127669421
   05140 Leishmaniasis
    127669421
  09163 Immune disease
   05310 Asthma
    127669421
   05322 Systemic lupus erythematosus
    127669421
   05323 Rheumatoid arthritis
    127669421
   05320 Autoimmune thyroid disease
    127669421
   05321 Inflammatory bowel disease
    127669421
   05330 Allograft rejection
    127669421
   05332 Graft-versus-host disease
    127669421
  09166 Cardiovascular disease
   05416 Viral myocarditis
    127669421
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    127669421
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asyl04147]
    127669421
Exosome [BR:asyl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127669421
  Exosomal proteins of epithelial cells
   127669421
  Exosomal proteins of breast milk
   127669421
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_2 ig Ig_3 Tricorn_C1 C2-set_2
Other DBs
NCBI-GeneID: 127669421
NCBI-ProteinID: XP_052019321
LinkDB
Position
19:2483553..2497728
AA seq 254 aa
MVCLWLPRGPCVAAVVLSLMMLNPPVALVRDPRPRFLEQLKAECHYLNRREQVWTVTRFI
YNQEEFARFHSDVGKFQAVTELGKPIAEYLNTQKDILDNYRATVDRCRNNYALVDIFMLN
LKAEPMVTVYPTKTQPLEHHNLLVCSVSDFYPGSIEVRWFRNGEEEKNGIVSTGLIQNGD
WTFQMLVMLEAVPQGGEVYTCQVEHPSLSSPVTVEWRARSTSAQNKMLSGVMGMALGLFI
LPVGLFIYSRNLRA
NT seq 765 nt   +upstreamnt  +downstreamnt
atggtgtgtctgtggctccccagaggcccctgtgtggcagctgtggtcctgagtctgatg
atgctgaaccctcccgtggctttggtcagggacccccgaccacgttttctggagcagttg
aaggccgagtgtcactacttaaacaggagggagcaagtgtggactgtgaccagattcatc
tataaccaggaagagtttgcccgctttcacagtgatgttgggaagttccaggcagtgact
gagctggggaagcccatagctgagtacttgaacacccagaaggacattctggacaattat
cgtgccacggtggacaggtgcagaaataactatgcccttgttgacatcttcatgttgaac
ttaaaagctgagcccatggtgactgtgtaccccacaaagacgcagcccctggaacaccac
aacctcctggtctgctctgtgagtgacttctaccctggcagcattgaagtgagatggttc
cggaatggtgaggaggagaagaatggcatcgtgtccacaggcctgatccaaaatggagac
tggaccttccagatgctggtgatgctggaggcggttcctcagggtggagaggtttacacc
tgccaggtggagcatcccagcctgagcagccctgtcacagtggagtggagggctcggtcc
acatctgcccagaacaagatgctaagcggagtcatgggcatggcgctaggtctgttcatc
ctcccagtggggctgttcatctactcaaggaatctgagagcatga

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