Apodemus sylvaticus (European woodmouse): 127671244
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Entry
127671244 CDS
T10613
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl01524
Platinum drug resistance
asyl04115
p53 signaling pathway
asyl04210
Apoptosis
asyl04215
Apoptosis - multiple species
asyl05010
Alzheimer disease
asyl05012
Parkinson disease
asyl05014
Amyotrophic lateral sclerosis
asyl05016
Huntington disease
asyl05020
Prion disease
asyl05022
Pathways of neurodegeneration - multiple diseases
asyl05134
Legionellosis
asyl05152
Tuberculosis
asyl05160
Hepatitis C
asyl05161
Hepatitis B
asyl05162
Measles
asyl05164
Influenza A
asyl05168
Herpes simplex virus 1 infection
asyl05169
Epstein-Barr virus infection
asyl05200
Pathways in cancer
asyl05222
Small cell lung cancer
asyl05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127671244 (Apaf1)
04215 Apoptosis - multiple species
127671244 (Apaf1)
04115 p53 signaling pathway
127671244 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127671244 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
127671244 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
127671244 (Apaf1)
05160 Hepatitis C
127671244 (Apaf1)
05164 Influenza A
127671244 (Apaf1)
05162 Measles
127671244 (Apaf1)
05168 Herpes simplex virus 1 infection
127671244 (Apaf1)
05169 Epstein-Barr virus infection
127671244 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
127671244 (Apaf1)
05152 Tuberculosis
127671244 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
127671244 (Apaf1)
05012 Parkinson disease
127671244 (Apaf1)
05014 Amyotrophic lateral sclerosis
127671244 (Apaf1)
05016 Huntington disease
127671244 (Apaf1)
05020 Prion disease
127671244 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
127671244 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127671244 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
127671244 (Apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
APAF1_C
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
NB-ARC
WHD_APAF1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CARD
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR41
CFAP251_N
Beta-prop_WDR19_1st
DSE1_N
WD40_RFWD3
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_like
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_NWD2_C
PEP5_VPS11_N
TRM82_WD
PAC11
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
CARD_2
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_ACSF4
Ge1_WD40
Beta-prop_RSE1_2nd
Utp8_b_propeller
AAA_16
NPHP3_N
AAA_22
Beta-prop_IP5PC_F
Beta-prop_WDR11_2nd
Beta-prop_IFT122_2nd
ATPase_2
AAA_18
nSTAND6
DUF2677
NACHT
Motif
Other DBs
NCBI-GeneID:
127671244
NCBI-ProteinID:
XP_052021940
LinkDB
All DBs
Position
20:44228393..44323103
Genome browser
AA seq
1128 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISNGVLTVVEEEKVKSQATQYHRAAALIKMI
LNKDNCAYISFYNALLHEGYKDLAALLHSGLPLVSSSSGKDTDGGITSFVRTVLCEGGVP
QRPVIFVTRKKLVNAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSG
GVHWVSIGKQDKSGLLMKLQNLCTRLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLL
ILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVTGQKHVVPVESGLGKEKGLEILSLFVN
MRKEDLPVEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVN
KSLLFCNRNGKSFCYYLHDLQVDFLTEKNRSQLQDLHRKMVTQFQRYHQPHTLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVAYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDSGRLYLEWINK
KTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEV
LCCAFSSDDSYIATCSVDKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNQSNHLLLATGS
NDFFLKLWDLNQKECRNTLFGHSNSVNHCRFSPDDELLASCSADGTLKLWDVRSANETKS
INVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAELHTGHH
STIQYCDFSPYDHLAVIALSQYCVELWNIDSRIKVADCRGHLSWVHGVMFSPDGSSFLTA
SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQTDYLP
EAPVSCCCLSPHLEYVAFGDEDGTIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLIS
SSEDSVIQVWNWQTEDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERD
FTCHQGTVLSCAVSSDATKFSSTSADKTAKVSPSLEVSTCKIYSVGYY
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaggcccgcaactgtttgcttcaacatagagaagcgttggaaaaggacatc
aaaacgtcctatatcatggatcacatgatcagtaatggcgtcttaacagtcgtagaggag
gaaaaggtcaaaagtcaggccactcaatatcatcgagcagctgctttgattaaaatgata
cttaataaagacaactgtgcctacatctcgttctacaacgctctgttgcatgagggctat
aaagacctggccgcccttctgcatagcggccttcctcttgtgtcttcttccagcggcaag
gatacggacggcggaataacttcctttgtgcggactgtgctgtgcgaaggcggagtgcca
cagaggcccgtgattttcgttactaggaagaagctggtcaatgcgattcagcagaagctc
tggaaattgaacggagagccagggtgggtcaccatatatgggatggcaggctgcggcaag
tctgtattagctgcggaagctgttcgagaccactccctcttagaaggttgtttctcaggg
ggtgtgcactgggtttccatcggaaaacaagacaaatctgggcttctcatgaagctgcag
aatctttgtacgcggttggatcaagaagagagcttctctcagaggctgccacttaatatt
gaggaggccaaagaccgcctccgtgtcctgatgctgcgcaaacacccaaggtctctgttg
atcttggatgatgtttgggacccttgggtgttaaaggcttttgacaatcagtgtcagatt
cttcttacaaccagagataagagtgtgacagactcagtgacgggtcagaagcatgttgtt
ccggtggagagtggtctagggaaagaaaagggacttgagatcttgtcacttttcgttaac
atgaggaaagaagatctgccagtggaggctcacagcattatcaaggaatgcaaaggttct
cctctcgtagtgtctttaatcggcgcgcttttacgagattttcccaatcgctgggcatac
tacctcagacagcttcagaacaagcagtttaagagaataaggaaatcttcatcctatgat
tatgaggctttggatgaggccatgtctataagtgttgaaatgcttagagaagacatcaaa
gactattacacagatctttccatccttcagaaggatgtcaaggtacccacaaaggtgtta
tgcgttctctgggacttggaaactgaggaagttgaagacatcctgcaggagtttgttaat
aagtctctcttattctgtaatcggaatggaaaatcgttttgttattatttacatgatctt
caagtggattttcttacagagaagaatcggagtcagcttcaggatctgcacaggaagatg
gtcacacagtttcagaggtatcaccagccacacacgctctctccagaccaggaggactgc
atgtattggtacaacttcctagcctatcacatggccagtgccaatatgcacaaagaactt
tgtgcattaatgttttccctggattggattaaagcaaaaacagaacttgttggccctgcc
catctgattcatgagttcgtggcatataggcatatcctggatgaaaaggattgtgcagtc
tgtgagaattttcaagagtttttgtctttaaatggacaccttcttggacgacagccattt
cctaatattgtacagctgggcctctgtgaaccagaaacttccgaagtttatcagcaagcg
aagctgcaggccaagcaggaggtggatagtgggcgtctttacctggagtggataaacaaa
aaaaccatcaagaatctgtcccgcttggttgtccgcccccatacagatgctgtttaccac
gcgtgtttttctcaggatggtcagagaatcgcttcttgtggagcggataaaaccttacag
gtgttcaaagccgagacaggcgagaaacttcttgacatcaaagctcatgaagatgaggtg
ctttgctgtgcattctcttcagacgacagttacatagcgacctgctcagtggataagaaa
gttaagatttgggattctgcgaccgggaagctagtgcacacctacgatgaacactcggag
caagtcaattgctgccacttcaccaaccagagtaaccacctgctcttggccaccgggtca
aacgatttcttcctcaagctctgggatttgaatcaaaaagaatgtcgaaataccttgttt
ggtcactcgaactcagtcaaccactgcaggttctcaccagacgacgagctcttggctagc
tgctcagctgacgggactttgaagctttgggatgtgagatcagcaaacgagacgaaaagc
attaatgtgaagcgcttcttcctgagttccgaagaccctcccgaggacgtggaggtgata
gtgaaatgttgttcctggtctgcagatggtgacaaaataatagtagcagcgaaaaacaaa
gtcctcctttttgatattcatactagtggcctgttggcagagctgcatacaggtcaccac
agcaccatccagtactgtgacttctccccctatgaccacttggcagtcatcgccctgtct
cagtactgtgtggagctgtggaacatagactcccgcataaaggtggcagactgcagggga
catttaagttgggttcacggtgtgatgttttctcctgacggctcatcatttttgacggct
tctgatgaccaaacaataagggtctgggagaccaaaaaggtatgcaagaactctgccatc
gtactaaaacaggaaatagatgttgtgtttcaggaaaacgaaacgatggtccttgctgtt
gacaacataagaggcctgcaactcattgctgggaaaacaggccagactgattacctgcct
gaagccccagtgagctgctgctgcctcagtccacatcttgagtacgttgcattcggagat
gaagatgggaccattaagattatagaacttccaaacaacagagtgttcagttctggggtt
ggacacaagaaagctgtacggcacatccagttcacagctgatgggaagacactgatttca
agctctgaagactctgtgattcaggtatggaattggcagacagaggactatgtattttta
caagcccatcaggaaacagtaaaggacttcaggctcctgcaagattcaagattgctttct
tggtcatttgatggaacggtgaaggtgtggaatgtcattactggaagaatagaaagagac
tttacttgtcatcagggcacagtgctttcctgtgctgtctcttctgatgcgaccaagttt
tcatctacctctgctgataagacggccaaggtcagtccgtcacttgaagtgtccacatgt
aaaatttacagcgttggttattattag
DBGET
integrated database retrieval system
