Apodemus sylvaticus (European woodmouse): 127671735
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Entry
127671735 CDS
T10613
Symbol
Nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04621
NOD-like receptor signaling pathway
asyl04668
TNF signaling pathway
asyl05152
Tuberculosis
asyl05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
127671735 (Nod2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127671735 (Nod2)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
127671735 (Nod2)
09163 Immune disease
05321 Inflammatory bowel disease
127671735 (Nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
asyl04054
]
127671735 (Nod2)
Pattern recognition receptors [BR:
asyl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127671735 (Nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
NOD2_WH
LRR_4
AAA_22
AAA_29
AAA_25
AAA_16
NB-ARC
AAA_30
ABC_tran
AAA_18
G-alpha
AAA_15
Motif
Other DBs
NCBI-GeneID:
127671735
NCBI-ProteinID:
XP_052022613
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All DBs
Position
21:complement(41713108..41751876)
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AA seq
1014 aa
AA seq
DB search
MCSQEDFQAQRSQLVALLVSGSLEGFESILDWLLSWDVLSREDYEGLSLPGQPLSHSARR
LLDTVWNKGVWGCQKLLEAVQKAQDNTHTFELHGCWETHSLHPARDLQSHRPAIVRRLYN
HVEAVLELAREEGFLSQYECEEIRLPIFTSSQRARRLLDLAVVKANGLAAFLLQHIGSPP
ASLSLPYEAAECQKFVSKLRTMVSAQSRFLSTYDGSENLCLEDIYTENVLELRTEVGTAG
TLQKSPPILGLEELFGTHGHLNKDADTILVVGEAGSGKSTLLQRLHLLWATGQNFQEFLF
VFPFSCRQLQCMAKPLSLRTLLFEHCCWPDVGQNDVFQFLLDHPDRVLFTFDGLDEFKFR
FTDRERHCSPIDPTSVQTLLFNLLQGNLLKNSCKVLTSRPDAVSALLRKFVRTECHLKGF
SEEGIKLYLRKHHREPGVADRLIHLIQATSALHGLCHLPVFSWMVSRCHRELLLQNRGFP
TTSTDMYLLILQHFLLHAAPPDSHPLGLGPGLLQSRLSTLLHLGHLALQGLAMSCYVFSA
PQLQAAQVDSDDISLGFLVRAQCVVPGSKAPLEFLHITFQCFFAAFYLAVSADTSAASLK
HLFSCGRLGSSVLVRLLPNLCIQGSRVKKGSEAALLQKAEPHNLQITAAFLAGLLSQQHR
DLLAACQVSERVLLQRQARARSYLAHSLREHFHSIPPAVPGETKSMHAMPGFIWLIRSLY
EMQEEQLAQEAVRRLDIEHLKLTFCRVGPAECAALAFVLRHLQRPVALQLDYNSVGDVGV
EQLRPCLSVCTALYLRDNNISDRGARTLVECALRYEQLQKLASLFNNKLTDGCASSMAKL
LAHKRNFLSLRVGNNHITAAGAKVLAQGLKSNTSLQFLGFWGNSVGDKGTRALAEVVANH
QSLKWLSLVGNNIGSEGAQALALMLEKNKSLEELCLEENHICDEGVFYLAEGLKRNSTLK
FLKLSNNGITYRGAEALLQVLSRNRAILEVWLRGNTFSLEEIQRLSSSDARLLL
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcacaggaagacttccaggcacagaggagccagctggtggcactgttggtctcg
gggtccttggagggctttgagagcatcttagactggctgctgtcatgggatgtgctctcc
agggaggactatgagggtctcagcctccctggccaacctctctcccattctgccaggcgt
ctgctggacacagtctggaacaagggtgtttggggctgtcagaagctccttgaagctgtg
cagaaggcccaggacaatactcacacctttgaactgcatgggtgctgggagactcactcc
cttcatccagccagagaccttcagagtcaccggccagccattgtgcggagactctacaac
catgtagaagccgtgctggagctggcaagggaagaggggtttctgagccagtacgagtgt
gaggagatcaggctgccaatcttcacatcgtctcagagggcaaggaggctgcttgatctc
gctgtcgtgaaggcaaacggactggctgccttccttctacagcacatcgggtcaccgcca
gcttcactgtctctgccttacgaggctgccgagtgtcagaagttcgtatctaagctgagg
accatggtgtcggctcagtctcgcttcctcagtacttacgatgggtcggagaatctctgc
ctggaggatatatacacggagaacgtcttggagctgcggacagaggtgggcacagctggg
accttgcagaagagccctcccatcctgggcctggaggaactctttggtacccatggtcac
ctgaacaaggatgcggacactatactggtggtgggcgaagcgggcagtggcaagagcact
cttctgcaacgtttgcacttgttgtgggccacagggcagaacttccaggagttcctcttc
gttttcccattcagctgccggcagctgcagtgcatggccaaaccgctgtccctgaggacg
ctgctctttgagcattgctgttggcccgatgttggtcagaatgacgtcttccaattcctc
ctggaccatcctgaccgtgtcctgttcaccttcgatggcttggatgagttcaagttccgg
ttcacggaccgggaacgccactgctctccgatcgaccccacgtcagtccagactctgctt
ttcaaccttcttcaggggaacctgctgaagaactcctgcaaggtgctgaccagccgtccg
gatgctgtgtcggcactcctcaggaagtttgtccgtacagagtgccacctcaagggcttc
tccgaagagggcatcaaactgtacctgagaaagcaccaccgggaacctggggtggcagac
cgcctcattcacctgatccaagccacctcagccctgcatggtctgtgccacctccctgtc
ttctcatggatggtgtccagatgccaccgggagctgctgctgcagaacaggggcttcccg
acgaccagcacggatatgtacctcctgatcctgcaacattttctgttgcatgccgcccct
ccagactcccatccgcttggtctgggacccggactcctccaaagccgtctctccaccctc
ctgcaccttggccacctggctctccagggcctggccatgagctgctacgtgttctcagcc
ccgcagctccaggcagctcaggttgactctgatgatatttctctcggtttcctggtacgt
gcccagtgcgtcgtgcccgggagcaaggcacccctggaattcctgcacattaccttccag
tgcttttttgccgccttctacttggccgtcagtgctgacacgtcggcggcctctctcaag
catctcttcagctgtggccggctgggcagctcagtgctggtaaggctgctgcccaacctg
tgtatccagggctccagagtcaagaagggcagcgaagcagctctactgcagaaggctgag
ccacacaacctgcagatcacagcagccttcctagcgggtctgttgtcccagcagcatcgg
gacctgttggccgcatgccaggtctccgagagggtgctgctccagcgtcaggcacgtgcc
cgctcctatctggcccacagcctccgagagcacttccattccatcccgccggccgtgccc
ggggagaccaagagcatgcacgccatgcctggcttcatttggctcatccggagcctgtac
gagatgcaggaggagcagctggcccaggaggctgtccgccgcctggacattgagcacctg
aagttgacattttgcagagtgggccctgcagagtgtgctgcgctggcctttgtactgcgc
catctccagcggcccgtggccctgcagctggattacaactctgtgggagatgtcggagtg
gaacagctgcggccatgccttagtgtctgcacagctctgtatttgagagataacaacatc
tcagatcgaggtgcccgcacgctggttgagtgcgctcttcgctatgagcagctgcagaag
ctagccagtctcttcaacaacaaactcacggatggctgcgcctcctccatggccaagctc
ctagcgcacaagcggaacttcttgtccctgagggtggggaacaatcacatcacagctgct
ggagctaaggtgctagcccagggcctcaagagcaacacctccctgcagttcctggggttc
tggggcaacagcgtgggtgataagggcacccgagccctggctgaagttgtggccaaccac
cagagcttgaagtggctcagccttgtaggaaacaacattggcagcgagggtgcccaagcc
ctagcactgatgctggagaagaataagtcactagaggaactctgcctagaagaaaaccat
atctgcgacgaaggtgtgttttatcttgcagaaggactgaagagaaattcaactttgaaa
ttcttgaagctgtctaacaatggtattacctaccggggtgcagaagccctcctgcaggtc
ctcagcaggaacagagccattctggaagtttggcttcgagggaacacgttctctctggag
gaaatccaaagactcagctctagtgacgccagacttctgctgtga
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integrated database retrieval system