KEGG   Apodemus sylvaticus (European woodmouse): 127671735
Entry
127671735         CDS       T10613                                 
Symbol
Nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
  KO
K10165  nucleotide-binding oligomerization domain-containing protein 2
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04621  NOD-like receptor signaling pathway
asyl04668  TNF signaling pathway
asyl05152  Tuberculosis
asyl05321  Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    127671735 (Nod2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    127671735 (Nod2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    127671735 (Nod2)
  09163 Immune disease
   05321 Inflammatory bowel disease
    127671735 (Nod2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:asyl04054]
    127671735 (Nod2)
Pattern recognition receptors [BR:asyl04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   127671735 (Nod2)
SSDB
Motif
Pfam: NACHT LRR_6 CARD NLRC4_HD2 NOD2_WH LRR_4 AAA_22 AAA_29 AAA_25 AAA_16 NB-ARC AAA_30 ABC_tran AAA_18 G-alpha AAA_15
Other DBs
NCBI-GeneID: 127671735
NCBI-ProteinID: XP_052022613
LinkDB
Position
21:complement(41713108..41751876)
AA seq 1014 aa
MCSQEDFQAQRSQLVALLVSGSLEGFESILDWLLSWDVLSREDYEGLSLPGQPLSHSARR
LLDTVWNKGVWGCQKLLEAVQKAQDNTHTFELHGCWETHSLHPARDLQSHRPAIVRRLYN
HVEAVLELAREEGFLSQYECEEIRLPIFTSSQRARRLLDLAVVKANGLAAFLLQHIGSPP
ASLSLPYEAAECQKFVSKLRTMVSAQSRFLSTYDGSENLCLEDIYTENVLELRTEVGTAG
TLQKSPPILGLEELFGTHGHLNKDADTILVVGEAGSGKSTLLQRLHLLWATGQNFQEFLF
VFPFSCRQLQCMAKPLSLRTLLFEHCCWPDVGQNDVFQFLLDHPDRVLFTFDGLDEFKFR
FTDRERHCSPIDPTSVQTLLFNLLQGNLLKNSCKVLTSRPDAVSALLRKFVRTECHLKGF
SEEGIKLYLRKHHREPGVADRLIHLIQATSALHGLCHLPVFSWMVSRCHRELLLQNRGFP
TTSTDMYLLILQHFLLHAAPPDSHPLGLGPGLLQSRLSTLLHLGHLALQGLAMSCYVFSA
PQLQAAQVDSDDISLGFLVRAQCVVPGSKAPLEFLHITFQCFFAAFYLAVSADTSAASLK
HLFSCGRLGSSVLVRLLPNLCIQGSRVKKGSEAALLQKAEPHNLQITAAFLAGLLSQQHR
DLLAACQVSERVLLQRQARARSYLAHSLREHFHSIPPAVPGETKSMHAMPGFIWLIRSLY
EMQEEQLAQEAVRRLDIEHLKLTFCRVGPAECAALAFVLRHLQRPVALQLDYNSVGDVGV
EQLRPCLSVCTALYLRDNNISDRGARTLVECALRYEQLQKLASLFNNKLTDGCASSMAKL
LAHKRNFLSLRVGNNHITAAGAKVLAQGLKSNTSLQFLGFWGNSVGDKGTRALAEVVANH
QSLKWLSLVGNNIGSEGAQALALMLEKNKSLEELCLEENHICDEGVFYLAEGLKRNSTLK
FLKLSNNGITYRGAEALLQVLSRNRAILEVWLRGNTFSLEEIQRLSSSDARLLL
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgtgctcacaggaagacttccaggcacagaggagccagctggtggcactgttggtctcg
gggtccttggagggctttgagagcatcttagactggctgctgtcatgggatgtgctctcc
agggaggactatgagggtctcagcctccctggccaacctctctcccattctgccaggcgt
ctgctggacacagtctggaacaagggtgtttggggctgtcagaagctccttgaagctgtg
cagaaggcccaggacaatactcacacctttgaactgcatgggtgctgggagactcactcc
cttcatccagccagagaccttcagagtcaccggccagccattgtgcggagactctacaac
catgtagaagccgtgctggagctggcaagggaagaggggtttctgagccagtacgagtgt
gaggagatcaggctgccaatcttcacatcgtctcagagggcaaggaggctgcttgatctc
gctgtcgtgaaggcaaacggactggctgccttccttctacagcacatcgggtcaccgcca
gcttcactgtctctgccttacgaggctgccgagtgtcagaagttcgtatctaagctgagg
accatggtgtcggctcagtctcgcttcctcagtacttacgatgggtcggagaatctctgc
ctggaggatatatacacggagaacgtcttggagctgcggacagaggtgggcacagctggg
accttgcagaagagccctcccatcctgggcctggaggaactctttggtacccatggtcac
ctgaacaaggatgcggacactatactggtggtgggcgaagcgggcagtggcaagagcact
cttctgcaacgtttgcacttgttgtgggccacagggcagaacttccaggagttcctcttc
gttttcccattcagctgccggcagctgcagtgcatggccaaaccgctgtccctgaggacg
ctgctctttgagcattgctgttggcccgatgttggtcagaatgacgtcttccaattcctc
ctggaccatcctgaccgtgtcctgttcaccttcgatggcttggatgagttcaagttccgg
ttcacggaccgggaacgccactgctctccgatcgaccccacgtcagtccagactctgctt
ttcaaccttcttcaggggaacctgctgaagaactcctgcaaggtgctgaccagccgtccg
gatgctgtgtcggcactcctcaggaagtttgtccgtacagagtgccacctcaagggcttc
tccgaagagggcatcaaactgtacctgagaaagcaccaccgggaacctggggtggcagac
cgcctcattcacctgatccaagccacctcagccctgcatggtctgtgccacctccctgtc
ttctcatggatggtgtccagatgccaccgggagctgctgctgcagaacaggggcttcccg
acgaccagcacggatatgtacctcctgatcctgcaacattttctgttgcatgccgcccct
ccagactcccatccgcttggtctgggacccggactcctccaaagccgtctctccaccctc
ctgcaccttggccacctggctctccagggcctggccatgagctgctacgtgttctcagcc
ccgcagctccaggcagctcaggttgactctgatgatatttctctcggtttcctggtacgt
gcccagtgcgtcgtgcccgggagcaaggcacccctggaattcctgcacattaccttccag
tgcttttttgccgccttctacttggccgtcagtgctgacacgtcggcggcctctctcaag
catctcttcagctgtggccggctgggcagctcagtgctggtaaggctgctgcccaacctg
tgtatccagggctccagagtcaagaagggcagcgaagcagctctactgcagaaggctgag
ccacacaacctgcagatcacagcagccttcctagcgggtctgttgtcccagcagcatcgg
gacctgttggccgcatgccaggtctccgagagggtgctgctccagcgtcaggcacgtgcc
cgctcctatctggcccacagcctccgagagcacttccattccatcccgccggccgtgccc
ggggagaccaagagcatgcacgccatgcctggcttcatttggctcatccggagcctgtac
gagatgcaggaggagcagctggcccaggaggctgtccgccgcctggacattgagcacctg
aagttgacattttgcagagtgggccctgcagagtgtgctgcgctggcctttgtactgcgc
catctccagcggcccgtggccctgcagctggattacaactctgtgggagatgtcggagtg
gaacagctgcggccatgccttagtgtctgcacagctctgtatttgagagataacaacatc
tcagatcgaggtgcccgcacgctggttgagtgcgctcttcgctatgagcagctgcagaag
ctagccagtctcttcaacaacaaactcacggatggctgcgcctcctccatggccaagctc
ctagcgcacaagcggaacttcttgtccctgagggtggggaacaatcacatcacagctgct
ggagctaaggtgctagcccagggcctcaagagcaacacctccctgcagttcctggggttc
tggggcaacagcgtgggtgataagggcacccgagccctggctgaagttgtggccaaccac
cagagcttgaagtggctcagccttgtaggaaacaacattggcagcgagggtgcccaagcc
ctagcactgatgctggagaagaataagtcactagaggaactctgcctagaagaaaaccat
atctgcgacgaaggtgtgttttatcttgcagaaggactgaagagaaattcaactttgaaa
ttcttgaagctgtctaacaatggtattacctaccggggtgcagaagccctcctgcaggtc
ctcagcaggaacagagccattctggaagtttggcttcgagggaacacgttctctctggag
gaaatccaaagactcagctctagtgacgccagacttctgctgtga

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