Apodemus sylvaticus (European woodmouse): 127672936
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Entry
127672936 CDS
T10613
Symbol
Lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl00514
Other types of O-glycan biosynthesis
asyl04330
Notch signaling pathway
asyl05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
127672936 (Lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127672936 (Lfng)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
127672936 (Lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asyl01003
]
127672936 (Lfng)
Enzymes [BR:
asyl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
127672936 (Lfng)
Glycosyltransferases [BR:
asyl01003
]
Glycan extension
O-Glycan
127672936 (Lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
127672936
NCBI-ProteinID:
XP_052024337
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All DBs
Position
22:complement(26135638..26144384)
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AA seq
378 aa
AA seq
DB search
MLQRCGRRLLLALVGALLACLLVLTADPPPTPVPAERGRRALRSLAGSSAAAPGPGSRAA
VDPGVLAREVHSLSEYFSLLTRARRDADPPPGVASRQGDRSPRPPAEVLSPRDVFIAVKT
TRKFHRARLDLLFETWISRHKEMTFIFTDGEDEALTKLTGNVVLTNCSAAHSRQALSCKM
AVEYDRFIESGKKWFCHVDDDNYVNLRALSRLLASYPHTQDVYIGKPSLDRPIQATERIS
EHKVRPVHFWFATGGAGFCISRALALKMGPWASGGHFMSTAERIRLPDDCTIGYIVEALL
GVPLIQSGLFHSHLENLQQVPTTQLHEQVTLSYGMFENKRNAVHLKGPFSVEADPSRFRS
IHCHLYPDTPWCPRTAIF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcggtgcggccggcgcctgctgctggcgctggtgggcgcgctgctggcttgt
ctcctggtgctcacggccgacccgccaccgactccggtgcccgctgagcgcggacggcgc
gcgctgcgtagcctggcgggctcctctgcggcggctccgggtccagggtccagggcggcc
gtggatcccggagtcctcgcccgcgaggttcatagcctctccgagtactttagtctactc
acccgcgcgcgcagagacgccgatccaccgcccggggtcgcttctcgccagggcgaccgc
tctccgcgtcctcccgccgaggttctgtcccctcgcgacgtcttcatcgccgtcaagacc
accagaaagtttcaccgcgcgcggctcgacctgctgtttgagacctggatctcgcgccac
aaggagatgacgttcatcttcacagacggggaggatgaagctctgaccaagctcacaggc
aatgtggtgctcaccaactgctctgcggcccacagccgccaggctctgtcctgcaagatg
gctgtggagtacgaccgtttcattgagtcggggaagaagtggttctgccatgtggatgac
gacaactacgtcaacctccgagcgctgtcgcggctgctggccagctatccccacacccaa
gacgtgtacatcggcaagcccagcctggacaggcccatccaggccacggaacggatcagc
gagcacaaagtgagacctgtccacttttggtttgccaccggaggagctggcttctgcatc
agccgagcgctggccctaaagatgggcccatgggccagtgggggacacttcatgagcaca
gcagagcgcatccggctccccgatgactgcaccattggctacattgtagaggctctgctg
ggggtgccccttatccagagcggcctcttccactcccacctggagaacctgcagcaggtg
cccaccacccagctccatgagcaggtcaccctgagctacggcatgtttgagaacaagcgg
aacgccgtgcacctcaagggaccgttctcagtggaagctgacccatccaggttccgctct
atccactgccacctgtatccggacacaccctggtgtccccgcacagccatcttctag
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