Apodemus sylvaticus (European woodmouse): 127674970
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Entry
127674970 CDS
T10613
Symbol
Trpc5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04360
Axon guidance
asyl04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
127674970 (Trpc5)
09158 Development and regeneration
04360 Axon guidance
127674970 (Trpc5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asyl01009
]
127674970 (Trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asyl04040
]
127674970 (Trpc5)
Protein phosphatases and associated proteins [BR:
asyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127674970 (Trpc5)
Ion channels [BR:
asyl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127674970 (Trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
127674970
NCBI-ProteinID:
XP_052026793
LinkDB
All DBs
Position
X:complement(105418472..105566874)
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AA seq
975 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLSAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSAEFSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGAPLIRTMPRASGAQGKPKAESSSKRSFMG
PSFKKLGLFFSKFNGQTSEPPPEPMYTISDGIAQQHYMWQDIRYSQMEKGKAEACSQSEM
NLSEVELGEIRGAAARSSECPLACSSSLHCASGICSSNSKLLDSSEDVFETWGEACDLLM
HKWGDGQEEQVTTRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggctcagctgtactacaagaaggtcaattactcaccatacagagaccgcattccactc
caaatcgtgagggctgagactgagctgtctgctgaggagaaggccttccttagtgctgtg
gagaagggggactatgccacagtgaagcaggcactgcaggaggctgagatctactacaat
gtcaacatcaactgcatggatcctttgggcaggagcgccctgctcattgccattgagaat
gagaacttggagatcatggagctactgctgaaccacagtgtgtatgtgggtgatgcattg
ctctatgccatccgcaaggaggtggtaggagctgtggaactgctgcttagctaccggaag
cccagtggagagaagcaggttcccactctgatgatggacacccagttctctgagttcaca
ccagacatcactcccatcatgttggcagcccacaccaacaactatgaaatcatcaaattg
cttgtccaaaagcgggtcactatcccaaggccccaccagatccgctgcaactgtgtggag
tgtgtatccagttcagaggtagacagtctgcgtcattcaaggtcccgactgaatatatac
aaggctctggcaagtccctcgctcattgccctatcaagtgaggaccccattctcacggcc
ttccggctgggctgggaactcaaggagctgagcaaggtggaaaatgagttcaaggctgag
tatgaagagctctcccaacaatgtaagctctttgccaaggacctgctggaccaagctcgg
agctcccgagaactggagatcatcctcaaccatcgagatgaccacagtgaagaacttgac
ccacagaagtaccatgacctggccaagctgaaggtggcgatcaaatatcaccagaaagag
tttgttgcacagccaaactgccaacaattgctggctaccctgtggtatgatggcttccct
ggatggcggagaaaacattgggtagtcaagcttctgacctgcatgaccattggattcctg
tttcctatgctgtccattgcctatctgatctcacccagaagcaaccttgggcttttcatc
aagaaaccctttatcaagttcatctgccacacagcatcctatcttaccttcctcttcatg
cttctcctggcttctcagcatattgtcagaacagatctccatgttcaaggacctccccca
acggttgtggaatggatgatactaccttgggttctaggtttcatttggggggagataaag
gaaatgtgggatggtggattcacggaatacatccatgattggtggaacctgatggatttt
gcaatgaactccctctacctggcgaccatttccttgaagattgtggcctacgtcaagtat
aatggttctcgtccaagggaagaatgggaaatgtggcacccgactctgattgcagaagca
ctcttcgcaatatccaacattttaagttccttgcgtctcatatccttgttcacagccaac
tcccatttagggcctctgcagatctctttgggacgcatgctgcttgatatactcaaattt
ctctttatctactgcctagtactactggcttttgccaacggactgaaccagctttatttt
tactatgagaccagagctattgatgaacccaacaactgcaaggggattcgatgtgaaaaa
cagaacaacgccttctccacgctctttgaaacccttcagtcactcttctggtctgtcttt
ggcctcttaaatctctacgttaccaatgtgaaggcccgacatgagtttaccgagtttgtg
ggcgctactatgtttgggacatacaacgtcatctccctggtagtgctgctgaacatgctc
attgctatgatgaacaactcctaccagctcattgccgatcatgctgatattgagtggaag
tttgcaagaacaaagctctggatgagttactttgatgaaggtggcaccttgccacctcct
ttcaacattatccccagccccaaatcatttctctatcttggcaactggtttaacaacacc
ttctgtcccaaaagagaccctgatggaagacgaaggaggcacaacttgagaagtttcaca
gaacgtcatgctgacagcctgatacaaaatcaacattatcaggaagttatcagaaattta
gtcaagagatacgtggctgcaatgataagaaactcgaaaacaaatgaggggctaacagaa
gaaaattttaaggaattaaagcaggacatctccagctttcgatatgaagtccttgacctc
ttgggaaacagaaaacatccgagaagaagcttctccactagcagcgctgaattctctcaa
agggatgataccaatgatggcagtggtggggctcgggccaaatctaagagtgtctctttc
aatttaggctgcaagaaaaaggcctgccatggagcacctctgatcagaaccatgccaaga
gctagtggcgcgcaaggaaagccaaaagctgagtcgtctagcaaacggtccttcatgggt
ccctctttcaagaaactgggtctcttcttctccaagtttaatggtcagacatctgaacct
cctccggagccaatgtacaccatctctgatggcattgcacagcagcattacatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgttctcaaagtgagatg
aacctcagtgaggtagagttaggtgaaatccggggtgctgctgctcggagcagtgaatgc
cccctagcctgttccagctctcttcactgtgcgtccggcatctgctcctcaaattcgaaa
cttttagactcgtcagaggacgtatttgaaacttggggagaagcttgtgacttgctcatg
cacaaatggggtgatggacaggaagaacaagttacaactcggctctaa
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