Apodemus sylvaticus (European woodmouse): 127678959
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Entry
127678959 CDS
T10613
Symbol
Lsm3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03018
RNA degradation
asyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127678959 (Lsm3)
09123 Folding, sorting and degradation
03018 RNA degradation
127678959 (Lsm3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asyl03019
]
127678959 (Lsm3)
03041 Spliceosome [BR:
asyl03041
]
127678959 (Lsm3)
Messenger RNA biogenesis [BR:
asyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127678959 (Lsm3)
mRNA degradation factors
5'-3' decay
Lsm complex
127678959 (Lsm3)
Spliceosome [BR:
asyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127678959 (Lsm3)
Complex C
U2 snRNP components
127678959 (Lsm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
127678959
NCBI-ProteinID:
XP_052030293
LinkDB
All DBs
Position
2:122404883..122412314
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AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtagatcagcaacagaccaccaataccgtagaggagcccctggatctt
atcaggctcagcttggatgagcgaatatatgtgaagatgagaaatgaccgagagcttcga
ggccgattacatgcttatgatcaacatttaaatatgatcctgggagatgtagaagaaact
gtgacgacgatagagattgatgaggagacatatgaagagatatataaatccacaaaacga
aacatccccatgctcttcgtccggggagacggtgttgttctagtcgcccctccattgaga
gttggctga
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