Apodemus sylvaticus (European woodmouse): 127679080
Help
Entry
127679080 CDS
T10613
Symbol
Plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
127679080 (Plxnd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
127679080
NCBI-ProteinID:
XP_052030578
LinkDB
All DBs
Position
2:complement(147574002..147613963)
Genome browser
AA seq
1928 aa
AA seq
DB search
MARRAAGGAPPSARAAAAVPLPPRPHSRGPALLPLPLLLLLLLLGAARAGALEIQRRFPS
PTPTNNFALDGTAGTVYLAAVNRLYQLSSANLSLEAEATVGPVPDSPLCHAPQLPQASCE
HPRRLTDNYNKILQLDPGQGLVVACGSIYQGLCQLRRRGNISALAVSFPPAAPTAEPVTV
FPSMLNVAANHPNASTVGLVLPPASGTGGSRLLVGATYTGYGSAFFPRNRSLEDHRFENT
PEIAIRSLDARGDLAKLFTFDLNPSDDNILKIKQGAKEQHKLGFVRAFLHPPVPPHSAQP
YAYLALNSEARAGDKDSQARSLLARICLPRGAGGDAKKLTESYIQLGLQCAGGAGRGDLY
SRLVSVFPAREQFFAVFERPQGAPGARNAPAALCAFRFADVQAAIRAARTACFVEPAPDV
VAVLDSVVQGTGPACESKRNIQLQPEQLDCGAAHLQHPLTILQPLRASPVFRAPGLTAVA
VASANNYTAVFLGTASGRLLKISLNESMQVVSRRALTVAYGEPVHHVMQFDPTDPGYLYL
MTSHQMARVKVAACEVHSTCADCVGAADAYCGWCTLETRCTLQQDCTNSSQPHFWTSASE
GPSRCPAMTVLPSEIDVHRDYTGMILQISGSLPSLSGMEMACDYGNGVRTVARVPGPAYD
HQIAYCNLLPRAQFPSFPAGQDHVTVEMSVRVKGHNIVSANFTIYDCSRIGQVYPHTACT
SCLSTQWPCSWCIQLHSCVSNQSRCQDSPNPTSPQDCPQILPSPLAPVPTGGSQDILVPL
TKATFFHGASLACSFGLEESFEAVWVNDSLVRCSHVVLHTAQKSQVFPLSLKLKGPPDRF
LDSPNPMTVVVYNCAMGSPDCSQCLGREDLGHLCVWNDGCRLRGPLQPLPGTCPAPEIRA
IEPLSGPLDGGTLLTIRGRNLGRRLSDVAHGVWIGSVACEPLADRYTVSEEIVCATGPAP
GAFSDVVTVNVSKEGRSREQFSYVLPMVHSLEPSMGPKAGGTRITIHGSDLNVGSMLQVL
VNDTDPCTDLTRTATSISCTVPGGTLPSPVPVCVRFESRGCVHGNLTFWYMQNPVIRAIS
PGRSPVSGGRTITVAGERFHMVQNVSMAVHHIGREPTFCKVLNSTLITCPSPGALSNASA
PVDFFINGRAYADEAAEELLDPAEAQRGSRFRLDYLPNPQFSTAKREKWIKHHPGEPLTL
VIHKEQDSLGLESHEYLIKIGQVSCDIQIISDRVIHCSVNESLGTAEGQLPITIQVGNFN
QTIATLQLGGSETAIVVSIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQ
IREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKSSSLYEERYVLPLKT
LNSQGGPPPQETHPLLGEWNIPEHCRPSMEEGISLFSSLLSNKHFLIVFVHALEQQKDFA
VRDRCSLASLLTIALHGKLEYYTSIMKELLVDLIDASAAKNPKLMLRRTESVVEKMLTNW
MSICMYGCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRN
LNVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASSTQS
YVLRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDNTLGRVKDLDTEKYFHLV
LPTDELVEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLAV
KYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACLSV
IAQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIQDMTPLSEQEMNAHL
AEESRKYQNEFNTSVALAEIYKYAKRYRPQIMAALEANPTARRTQLQHKFEQVVALMENN
IYECYSEA
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgcgccgcgggcggcgcaccccctagcgcccgggccgctgcggccgtcccc
ttgcctccgcgccctcactcgcggggccctgctctgctgccgctgcctctgctgctgctg
ctgctgctactcggggcggcgcgggccggcgccctagagatccagcgccgcttcccctcg
cccacgcccaccaacaacttcgccctggacggcacggcgggcaccgtgtacctggcggcg
gtgaaccgcctgtaccagctgtcgagtgccaacttgagcctggaggccgaggcgaccgtg
ggtcccgtgccggacagccctctgtgtcacgccccgcagctcccacaggcctcgtgcgag
cacccgcggcgcctcacggacaactacaacaagatcctgcagttggacccgggccagggt
ctggtggtcgcgtgcggctccatctaccagggtctgtgccagctgaggcgccggggcaac
atctcagccctggccgtgagctttccccctgccgcgccgaccgcagaaccggtcaccgtg
ttccccagcatgctcaacgtggccgccaatcaccccaacgcgtccaccgtgggactggtg
ctgccgccggcctcgggcacggggggcagccgcctgctcgtgggcgccacgtacaccggc
tacggcagtgctttcttcccgcgcaaccgtagcctagaagaccaccgcttcgagaacacg
cccgagatcgcgatccgctccctggacgcgcgtggagacttggctaagctcttcaccttc
gatctcaacccgtcggacgacaacatcctgaagatcaagcagggcgccaaggagcagcac
aagctgggcttcgtgcgtgccttcttgcacccgccggtgccaccgcacagcgcgcagccc
tacgcgtacctggcgctcaacagcgaggcgcgtgcgggcgacaaggacagccaggcgcgc
agcctgctggcgcgcatctgcctgccccgcggcgcgggtggcgacgccaagaagctcacc
gagtcctacatccaactaggtttgcagtgcgcgggcggcgcgggccgcggcgacctctac
agccgccttgtgtcggtcttccccgcgcgcgagcagttctttgctgtcttcgagcgtccc
cagggcgccccaggtgcccgcaacgccccggccgcgctctgcgccttccgcttcgcagac
gtgcaagctgccattcgtgcagcgcgcaccgcctgcttcgtggagccggcgcccgacgtg
gtggcggtgctggacagcgtggtgcagggcaccgggccggcctgcgagagcaaacgcaac
atacagctgcagccggagcagctggactgcggagcggcccacctgcagcaccccctgacc
atcctgcagccgctgagggcatcgcccgtgttccgtgctccagggctcacggccgtggct
gtggccagcgctaacaactacacggccgtcttcctgggcactgcctcagggaggctcctt
aagatcagcctgaacgagagtatgcaggtggtaagcaggcgcgcgctgaccgtggcctat
ggggagcccgtgcaccacgtcatgcagtttgaccccacagatcccggctacctgtacctg
atgacgtcccaccagatggcccgagtgaaggtggcggcgtgtgaggtacactccacctgc
gcagactgcgtgggcgcagccgatgcctactgcggctggtgcactctggagacccggtgc
acactccagcaggattgcaccaactccagccagccgcatttctggaccagtgccagcgag
ggccccagccgctgccctgccatgacagtcctgccctctgagattgatgtgcaccgggac
tacacaggtatgatcttacagatctcaggaagcctgcccagcctcagtggtatggagatg
gcttgtgactatggaaatggcgtccgaacagtggcccgagtacccggccctgcctatgat
catcagattgcctattgcaatctcctgcccagagcccagtttccatcctttcctgctggc
caggaccatgtgaccgttgagatgtctgtacgggtcaaaggacacaacattgtctcagcc
aatttcaccatctacgactgcagtcggattggacaagtctacccccatacggcctgtacc
agctgcctgtctacacagtggccttgctcctggtgcatccagctgcactcttgtgtctcc
aaccagtctcggtgccaggactcaccaaaccccacgagccctcaggactgtcctcagatc
ctgccctcgcccctagcgcccgtgcccacgggtggctcccaagacatcctggtgcctctg
actaaagccaccttcttccatggtgcctcccttgcctgcagcttcgggctggaagagagt
tttgaggctgtatgggtgaatgactcactggtccgctgcagccacgtggtgctgcacaca
gcccagaagagccaggtgtttccactgagcctcaagctgaaggggccaccagaccgattc
ctagacagccctaaccccatgacagttgtggtctacaattgtgctatgggcagccccgac
tgttcccagtgcctgggccgtgaggacctgggtcacctttgtgtttggaatgatggctgt
cgtctgagagggcccctgcagccactccctggcacctgcccggcccctgaaatccgagcg
attgagcccctgagtggccccttggacggtgggaccttgctgaccatccgtggcaggaac
ctgggccgtcggcttagcgacgtggcacatggtgtgtggattggcagtgtggcctgtgaa
cccctggctgacagatacacagtttcagaggagatcgtgtgtgccacagggcccgcccca
ggggccttctcggacgtggtaacggtgaacgtctccaaggaaggcaggtctcgggaacag
ttctcctatgtgctgcccatggtccactcgctggagccttccatgggcccaaaggcaggg
ggcacaaggatcaccattcacggcagtgacctcaacgtgggctccatgctgcaggtcctg
gtgaatgacacagatccctgcacggaccttacgcgcacagccaccagcatctcctgcact
gtgccagggggtaccctgccctctccagtgcctgtgtgtgtgcgcttcgagagccggggc
tgcgtgcatggaaacctcaccttctggtacatgcagaacccggtcatcagagccatcagc
ccaggccgcagccccgtcagtggcggcaggaccatcactgtggccggcgaacgcttccac
atggtgcagaacgtatcaatggctgtacaccacattggccgggagcccacgttctgcaag
gttctcaactccacgctcatcacctgcccatctcctggagccctgagcaacgcttcggcg
cctgtagacttcttcatcaatggccgggcgtatgcagatgaggcggctgaggagctgctg
gaccctgcagaggcacagcggggcagccggttccgcctggactacctccccaacccacag
ttctccacagccaagagggagaagtggatcaaacatcaccctggagagccgctcaccctc
gtcatccataaggagcaagacagcctggggctcgagagccatgagtacctcatcaagatt
ggccaggtgtcctgcgacatccagatcatctcagacagagtcatccactgctccgtcaat
gagtcgctgggcacagctgaaggacagctgcccatcacaatccaggtggggaacttcaac
cagaccatcgccacactgcaactggggggcagcgagacggccattgtggtatccatcgtc
atttgcagtgtcctgttgctgctgtctgtggttgctctgttcgtcttctgtaccaagagc
cgccgtgctgaacgctactggcagaagaccctgctgcagatggaagagatggagtcgcag
atccgagaggagatccgcaaaggattcgcggagctgcagacagacatgacagatctcacc
aaggagctgaaccgcagccagggcatccccttcttggagtacaagcactttgtgactcgg
accttcttccccaagagctcttccctctatgaagaacgatatgtgctgcccttgaagacc
ctcaactcccaaggcggccccccgccacaggagacccacccactgctgggggagtggaac
atccccgagcactgccggcccagcatggaggaggggatcagcctgttctcctcactgctc
agcaacaagcacttccttatcgtcttcgttcacgctctggagcagcagaaggacttcgcc
gtgcgcgacaggtgcagcctggcgtccctgctgaccatcgcactgcatggcaagctggaa
tactacacaagcatcatgaaggagctgctggtcgatctcatagacgcctcggccgccaag
aaccccaagctcatgttgcggcgcacggagtctgtggtggagaagatgcttaccaactgg
atgtccatctgcatgtacggctgtctgagggaaacagtaggtgagccgttcttcctgctg
ttatgcgccatcaagcagcagatcaacaaaggttccatcgacgccatcacaggcaaagcc
cgctacacacttaatgaggagtggctgctgagggagaacattgaggccaaaccccggaac
ctgaacgtgtccttccagggctgtggtatggattccctgagtgtgcgggccatggacacc
gacacgctgacgcaggtgaaggagaagattctggaagccttctgcaagaatgtgccctac
tcacagtggccgcgggcggaggacgtggacctcgaatggtttgcctcaagcacccagagc
tacgtgctccgggacctggatgacacgtcggtggtggaggacggccgtaagaaactgaac
acgctggcccactacaagatccctgagggcgcctcgctagccatgagcctcacagacaag
aaggacaataccctgggccgagtgaaagacttggacacagaaaagtatttccatttggtg
ctgcctacggatgagctggtggagcctaagaaatctcaccggcagagccaccgcaagaaa
gtgttgccggagatctacctgacccgcctgctgtccaccaagggcacactgcagaagttc
ctggatgacctgtttaaggctatcctgagtatccgagaggacaagcccccactggctgtc
aagtatttctttgacttcctagaggaacaggcggagaagagaggcatctctgaccccgac
accctgcacatctggaagaccaacagccttcctctccgcttctgggtgaacatcttaaaa
aatccccagtttgtcttcgacatcgagaagacagaccacatcgatgcctgcctgtctgtc
atcgctcaggccttcatcgacgcctgctccatctctgacctgcagctgggcaaggactca
cccaccaacaagcttctatacgcgaaggagatccccgagtaccggaagatcgtacagcgc
tattacaaacagatccaggacatgacgccactcagcgagcaggaaatgaacgcacacctg
gcggaggagtctcggaaataccagaatgagttcaacacaagcgtggccctggctgagatc
tataaatatgctaagaggtatcgcccacagatcatggctgccctggaggccaaccccact
gcccgcaggacccagctacagcacaagtttgaacaggtggtggctctgatggaaaacaat
atctatgagtgttacagcgaggcctga
DBGET
integrated database retrieval system
