Apodemus sylvaticus (European woodmouse): 127685840
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Entry
127685840 CDS
T10613
Symbol
Fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04350
TGF-beta signaling pathway
asyl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127685840 (Fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127685840 (Fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
asyl00536
]
127685840 (Fbn1)
Glycosaminoglycan binding proteins [BR:
asyl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127685840 (Fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_TEN
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
127685840
NCBI-ProteinID:
XP_052039429
LinkDB
All DBs
Position
5:complement(108159567..108358481)
Genome browser
AA seq
2873 aa
AA seq
DB search
MRRGGLLEVALAFALLLESYTSHGADTNLEAGSPKETRANRAKRRGGGGHDALKGPNVCG
SRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPSGQISPSCGSRSIQHCS
IRCMNGGSCSDDHCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCERD
YRTGPCFTVVSNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNIR
TGACQDVDECQAIPGLCQGGNCINTVGSFECKCPAGHKFNEVSQKCEDIDECSTIPGVCD
GGECTNTVSSYFCKCPPGFYTSPDGTRCVDVRPGYCYTALTNGRCSNQLPQSITKMQCCC
DLGRCWSPGVTVAPEMCPIRSTEDFNKLCSVPLVIPGRPEYPPPPIGPLPPVQPIPPGFP
PGPVIPVPRPPPDYPYPSASREPPRVLPFNVTDYCQLVRYLCQNGRCIPTPGSYRCECNK
GFQLDIRGECIDVDECEKNPCTGGECINNQGSYTCHCRAGYQSTLTRTECRDIDECLQNG
RICNNGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSIRNMCLNGMCINEDGSFKCIC
KPGFQLASDGRYCKDINECETPGICMNGRCVNTDGSYRCECFPGLAVGLDGRVCVDTHMR
STCYGGYRRGQCVKPLFGAVTKSECCCASTEYAFGEPCQPCPAQNSAEYQALCSSGPGMT
SAGTDINECALDPDICPNGICENLRGTYKCICNSGYEVDITGKNCVDINECVLNSLLCDN
GQCRNTPGSFVCTCPKGFVYKPDLKTCEDIDECESSPCINGVCKNSPGSFICECSPESTL
DPTKTICIETIKGTCWQTVIDGRCEININGATLKSECCSSLGAAWGSPCTICQVDPICGK
GFSRIKGTQCEDINECEVFPGVCKNGLCVNSRGSFKCECPSGMTLDATGRICLDIRLETC
FLKYDDEECTLPIAGRHRMDACCCSVGAAWGTEECEECPLRNSREYEELCPRGPGFATKD
ITNGKPFFKDINECKMIPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISP
DLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGICHNTEGSYRC
ECPPGHQLSPNISACIDINECELSANLCPNGRCVNLIGKYQCACNPGYHPTHDRLFCVDI
DECSIMNGGCETFCTNSDGSYECSCQPGFALMPDQRSCTDIDECEDNPNICDGGQCTNIP
GEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLSGTCENTKGSFICHCDMGYSGKKGKT
GCTDINECEIGAHNCGRHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSQHA
DCKNTMGSYRCLCKDGYTGDGFTCTDLDECSENLNLCGNGQCLNAPGGYRCECDMGFVPS
ADGKACEDIDECSLPNICVFGTCHNLPGLFRCECEIGYELDRSGGNCTDVNECLDPTTCI
SGNCVNTPGSYTCDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVS
KASCCCSLGKAWGTPCELCPPVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQ
GGKCINTFGSFQCRCPTGYYLNEDTRVCDDVNECETPGICGPGTCYNTVGNYTCICPPDY
MQVNGGNNCMDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPI
PSTDEFATLCGSQRPGFVIDIYTGLPVDIDECREIPGVCENGVCINMVGSFRCECPVGFF
YNDKLLVCEDIDECQNGPVCQRNAECINTAGSYRCDCKPGYRLTSTGQCNDRNECQEIPN
ICSHGQCIDTVGSFYCLCHTGFKTNADQTMCLDINECERDACGNGTCRNTIGSFNCRCDH
GFILSHNNDCIDVDECATGNGNLCRNGQCVNTVGSFQCRCNEGYEVAPDGRTCVDINECV
LDPGKCAPGTCQNLDGSYRCICPPGYSLQNDKCEDIDECVEEPEICALGTCSNTEGSFKC
LCPEGFSLSSTGRRCQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCEL
CPTEPDEAFRQICPFGSGIIVGPDDSAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYI
LEGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPMMTCEDINECAQNPLLCA
FRCVNTYGSYECKCPVGYVLREDRRMCKDEDECAEGKHDCTEKQMECKNLIGTYMCICGP
GYQRRPDGEGCIDENECQTKPGICENGRCLNTLGSYTCECNDGFTASPTQDECLDNREGY
CFSEVLQNMCQIGSSNRNPVTKSECCCDGGRGWGPHCEICPFEGTVAYKKLCPHGRGFMT
NGADIDECKVIHDVCRNGECVNDRGSYHCICKTGYTPDITGTACVDLNECNQAPKPCNFI
CKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQH
HTACIDNNECTSDINLCGSKGVCQNTPGSFTCECQRGFSLDQSGASCEDVDECEGNHRCQ
HGCQNIIGGYRCSCPQGYLQHYQWNQCVDENECLSAHVCGGASCHNTLGSYKCMCPTGFQ
YEQFSGGCQDINECGSSQAPCSYGCSNTEGGYLCGCPPGYFRIGQGHCVSGMGMGRGGPE
PPASGEMDDNSLSPEACYECKINGYPKRGRKRRSTNETDASDIQDGSEMEANVSLASWDV
EKPASFAFNISHINNKVRILELLPALTTLTNHNRYLIESGNEDGFFKINQKEGVSYLHFT
KKKPVAGTYSLQISSTPLYKKKELNQLEDRYDKDYLSGELGDNLKMKIQILLH
NT seq
8622 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaggagggctgctggaggtcgcgctggcgttcgccctgctactcgagtcctac
acgagccatggggcggacaccaatctggaggctgggagcccgaaggagaccagagccaat
cgggccaagagaagaggcggcggaggacacgatgcgctgaaaggacccaacgtctgtgga
tcacgttataatgcatactgttgtcctggatggaaaaccttacctggtggaaatcagtgt
attgttcccatttgccggcattcctgtggggatggattctgctcgaggccaaatatgtgc
acttgcccgtctggtcagatatcgccttcctgtggctccagatccatccaacactgcagc
atccgctgtatgaatggaggcagctgcagcgatgaccactgtctatgccagaaggggtac
attggcactcactgcggacagcctgtctgtgaaagcggctgtctcaacggcgggaggtgt
gtggccccaaatcggtgtgcctgcacatacggctttactggaccccagtgtgaaagagat
tacagaacaggcccgtgtttcactgtggtaagcaaccagatgtgccagggacagctcagc
gggattgtctgcaccaaaacactctgctgtgccacagtaggcagagcctggggccacccc
tgtgagatgtgtcctgcccagcctcacccctgtcgccggggcttcattcccaacatccgc
actggagcttgtcaagatgtggatgaatgtcaggctatcccggggctgtgtcaaggagga
aattgcattaataccgttggatcttttgagtgcaaatgccctgctggacacaaatttaat
gaagtgtcacaaaaatgtgaagatattgacgagtgcagcactattcctggagtctgtgat
ggcggggagtgtacaaacacggtcagcagttacttctgcaaatgtccccctggtttttac
acctctcctgatggcaccagatgtgtagatgttcgccctggttactgctacacggctctg
accaacgggcgctgctctaaccagctgccacagtccataaccaaaatgcagtgctgttgc
gatcttggccggtgctggtctccaggggttactgtcgctcccgagatgtgtcccatcaga
tcgactgaggatttcaacaagctgtgctccgtccctctggtaattcccgggagaccagag
tatcctcccccacccattggcccccttcctccggttcagcccattcctcctggctttcct
cctgggcctgtgataccagtccctaggccaccgccagattatccatatccgtctgcgtcg
cgggaaccaccaagggtgctgcctttcaacgttactgactactgccaattggtccgctat
ctctgtcaaaacgggcgctgcattccgactcccggaagctaccgctgtgagtgcaacaag
ggcttccagctggatatccgcggcgagtgcatcgatgttgatgagtgtgagaaaaacccg
tgcactggtggagagtgtatcaacaaccagggctcctatacctgtcactgccgagctggt
taccagagcacactcaccagaaccgagtgcagagacatagatgagtgccttcagaacggc
cggatctgcaacaatggtcgctgtatcaacacagacggtagcttccactgcgtgtgcaat
gcgggctttcacgtcactcgggacggaaagaactgtgaagatatggatgagtgcagcatc
agaaacatgtgcctaaatggaatgtgtatcaatgaagatggaagtttcaagtgtatttgc
aaacctgggttccagctggcatcagatggccgctactgcaaagatatcaatgagtgtgag
actcctgggatctgcatgaacggacgctgtgtgaacactgatggctcctacagatgcgaa
tgcttccctggattggctgtgggtctagatgggcgtgtgtgtgttgacacacacatgcgg
agcacatgctacggaggatacaggagaggccagtgtgtgaagccattgtttggtgctgtt
accaaatcagaatgctgctgtgccagcaccgagtatgcatttggggaaccctgccagccc
tgtcctgcacagaattcagcggagtatcaggcgctctgcagcagtggaccggggatgaca
tcggcaggcactgatataaacgaatgtgcattagatcctgatatttgcccaaatggaatt
tgtgaaaatctccgcgggacctacaaatgtatatgcaattcgggatatgaagtagacata
actgggaaaaactgtgttgatattaatgagtgtgtgctgaacagtctactttgtgacaat
ggacaatgtcgaaacacccctggaagttttgtctgtacctgccccaagggatttgtgtac
aaacctgacctaaaaacctgtgaagacattgatgaatgtgaatcgagtccctgcattaat
ggagtctgcaagaacagccctggctctttcatttgtgaatgttctcctgaaagtactctg
gatccaacaaaaaccatctgcatagaaaccatcaagggcacttgctggcagactgtcatc
gacgggcgctgtgagatcaacatcaacggagccaccctgaagtccgagtgctgctcctcc
ctcggtgctgcctgggggagcccgtgcaccatatgtcaagttgatcccatatgtggtaaa
gggttctcaagaattaaaggcacacaatgtgaagatatcaacgagtgtgaagtgttccca
ggagtatgcaagaatggcctgtgtgtcaactccaggggttcgttcaagtgcgagtgtccc
agtggaatgactttggatgctacaggaagaatctgccttgacatccgcctggagacctgc
ttcctgaagtacgacgatgaagagtgcaccttgcccatcgctggccgccacagaatggat
gcctgctgctgctctgttggggcagcctggggaacggaagagtgtgaggagtgtccactg
agaaacagccgggagtatgaggagctctgtccccgagggcctgggtttgccacaaaagac
attacaaatgggaaacctttcttcaaagatatcaatgagtgtaagatgatacccagcctc
tgtacccacggcaagtgcaggaacaccattggcagcttcaagtgcagatgtgacagcggc
tttgctctggattctgaagagaggaactgcacagacattgatgagtgccgcatatctcct
gacctctgtggccggggccagtgtgtgaataccccaggggactttgaatgcaagtgtgac
gaaggctatgaaagcggcttcatgatgatgaagaactgcatggatattgatgaatgtcag
agagatcctctcctatgccgaggaggcatctgccacaacacagagggaagttatcgctgt
gaatgtcctcctggtcaccaactgtctccaaacatctctgcgtgcattgacatcaacgag
tgtgaactgagcgcaaacctctgtcccaatgggcgttgtgtgaacctcatagggaagtac
cagtgtgcctgcaacccgggttatcaccccactcatgataggcttttctgtgttgacatt
gatgaatgcagcataatgaacggtggctgtgagaccttctgcacgaactcggacgggagc
tacgaatgcagctgtcagcccggcttcgcgctgatgccagaccagcgatcgtgcacagac
attgatgagtgtgaagataaccccaatatctgtgatggtggccagtgcacaaacatacct
ggagagtacaggtgcctgtgctatgacgggttcatggcgtctgaagacatgaagacttgt
gtggatgtcaatgaatgtgacctgaatccgaacatctgcctcagtgggacctgtgaaaac
actaaaggctcattcatctgccactgtgatatgggctattcagggaagaaggggaaaacg
ggctgcacagatatcaatgaatgtgagattggagcacacaactgcggcagacatgctgta
tgcacaaatacagcggggagcttcaagtgcagctgcagtcctggctggattggagatggc
attaagtgcacagatctggatgaatgctctaatggaacccacatgtgcagccaacacgcg
gactgtaaaaacaccatggggtcatatcgctgtctctgtaaggatggctatacaggggat
ggcttcacctgtacagacctcgacgagtgctctgagaacctgaacctctgcggcaatggc
cagtgcctcaacgcccctggcgggtaccgttgtgaatgtgacatgggcttcgtgcccagt
gctgacgggaaggcctgtgaagatatcgatgagtgctcccttccaaacatctgtgtcttt
ggaacgtgccacaacctcccgggcctcttccgttgcgagtgtgagattggctacgaactg
gaccgaagtggtgggaactgcacagatgttaatgagtgtctggatccaaccacctgcatc
agtgggaactgtgtcaacactccgggtagttacacatgtgactgtcctccagattttgag
ctgaatccaacacgagtcggctgtgtcgatactcgctctggaaactgctatctggatatc
cggccccgtggagacaatggagatacagcctgcagcaatgaaatcggagttggtgtttct
aaagcttcctgctgttgttcgctgggtaaagcttggggaaccccatgtgagctgtgtcct
cctgtgaacacatctgagtataaaattctttgccctggaggagaaggttttcgtccaaat
cccatcactgtaatattggaagacatcgatgagtgccaggagctcccggggctgtgccaa
ggggggaagtgcatcaacacctttggcagcttccagtgtcgctgtccaactggttactac
ctgaatgaagacacacgagtgtgtgatgatgtgaatgaatgtgagactcctggaatctgt
ggtccggggacatgttacaacactgttggcaactacacctgcatctgtcctccagactac
atgcaagtgaacgggggaaataattgtatggacatgagaagaagtctatgctacagaaac
tattacgctgataaccagacttgtgatggagaactcctgttcaacatgaccaagaagatg
tgctgttgctcctacaacatcggcagagcctggaataaaccctgcgaacagtgtcccatc
ccaagcacagatgaatttgctaccctctgtggaagccagaggccaggttttgtgattgac
atttacactggtttacccgtggatattgatgaatgccgggagatccctggggtctgtgaa
aatggagtgtgcatcaacatggttggcagcttcaggtgtgagtgtccggtgggattcttc
tataacgacaagttactggtctgtgaagatatcgatgagtgtcagaacgggcccgtgtgc
cagcgcaatgcggaatgcatcaacactgcaggcagctaccgctgtgactgtaagcctggc
taccgcctcacctccacgggccaatgcaatgatcgaaatgagtgccaagaaatcccgaac
atatgcagtcatggtcagtgcattgacactgtgggaagcttctactgcctttgtcacacc
ggcttcaaaacaaatgcagatcagaccatgtgcttggacataaatgagtgtgagagagac
gcctgtgggaacgggacttgtagaaacacgattggctccttcaactgccgctgcgaccat
ggcttcatactgtctcacaacaatgactgcatagatgttgatgaatgtgcaactggaaac
gggaacctttgcagaaatggccagtgtgtcaacacggtggggtcctttcagtgcagatgc
aatgaaggctacgaggtggctcctgatggcaggacctgcgtggatatcaatgaatgtgtt
ctggatccggggaaatgtgcacctggaacatgtcagaacttggatggctcctacagatgc
atctgcccacctgggtacagtctacagaatgacaaatgcgaagatattgatgagtgtgtt
gaagagccagaaatttgtgctttggggacctgcagcaacactgaggggagcttcaaatgt
ctgtgtccagaagggttctccctgtcctctactggaagaaggtgccaagatttgcgaatg
agctactgctatgcaaagtttgaaggtgggaagtgttcatcacccaaatccagaaaccat
tccaagcaggagtgctgctgcgctttgaagggagaaggctggggagacccttgtgagttg
tgccccacagagccagatgaggctttccgccagatctgcccctttggaagtgggatcatc
gtgggccctgacgactccgcggttgatatggatgaatgcaaagaacctgatgtctgtaaa
catgggcagtgcatcaacacagacggctcctatcgctgcgagtgtccctttggttatatt
ctggaaggcaatgaatgtgtggatactgatgaatgctccgtgggcaatccgtgtggaaac
gggacctgcaagaatgtgattggaggttttgagtgtacctgtgaggagggattcgagcct
ggtccaatgatgacatgtgaagatataaatgaatgtgcccagaatcctctactctgtgcc
ttccgctgtgtaaatacctatgggtcctatgaatgcaagtgccctgttggatatgttctg
cgagaagataggaggatgtgtaaagatgaggatgagtgtgcagagggaaaacatgactgt
actgaaaagcaaatggagtgcaagaatctcatcggtacctacatgtgcatctgcggccct
gggtaccagcgcagacccgatggagagggctgcatagatgagaatgagtgtcagaccaag
cccgggatctgtgagaacgggcgctgcctcaacaccctggggagctacacctgtgagtgt
aacgatggcttcacggccagccccactcaggacgagtgcttggacaaccgggaaggatac
tgcttttccgaggtcctgcaaaacatgtgccagattggctcaagcaacaggaaccccgtc
accaagtccgagtgctgctgtgatggagggagaggctggggaccccactgtgagatctgc
cctttcgagggcacagtggcttacaagaagctgtgtccccatggccgaggattcatgacc
aacggagcagacattgatgagtgcaaggttattcacgatgtttgccgaaacggggagtgt
gtcaatgacagagggtcatatcactgcatctgtaaaactggctacactccggatataaca
ggaactgcctgcgtagatctgaatgagtgcaaccaggctcccaaaccctgcaattttata
tgcaagaacacagaggggagttaccagtgctcctgcccgaagggctatattctgcaggag
gatggaaggagctgcaaagatcttgatgagtgtgcaaccaagcagcataactgtcagttc
ctctgtgttaacaccatcggtggcttcacatgcaaatgccctcctgggtttacccagcac
cacactgcctgtatcgataacaatgagtgcacatctgatatcaacctgtgtgggtccaag
ggcgtttgccagaacactccagggagcttcacctgtgaatgccagaggggattctcactg
gatcagagtggtgccagctgtgaagatgtggacgagtgtgagggtaaccaccgctgtcag
catggctgccagaacatcattggaggctacagatgtagctgcccccagggctacctccag
cactaccaatggaaccagtgtgtagatgaaaacgagtgcctgagtgcacacgtctgcggg
ggagcctcctgccacaacaccctgggcagttacaagtgcatgtgtcccaccggcttccag
tatgaacagttcagcggcggctgccaagacatcaacgagtgtggctcgtcccaggccccc
tgcagctatggatgctccaacactgagggtggctacctgtgtggctgtcctccggggtac
ttccggatagggcaaggccattgtgtttctggaatgggcatgggccgaggtggccctgag
ccacctgccagcggtgagatggacgacaactcactgtccccagaggcctgctatgagtgt
aagatcaatggctatccaaaacgaggcaggaaacggagaagcacaaacgaaacggatgcc
tctgacatccaggatgggtctgagatggaagccaacgtgagcctcgccagctgggatgtg
gagaagccagctagctttgctttcaatatttcccatatcaataacaaggtccgaatccta
gaactcctgccggcccttacaactctgacgaaccacaacagatacttgattgaatctgga
aatgaagatggcttctttaaaatcaaccagaaagaaggggtcagctacctccacttcacg
aagaagaagccagtggctggaacctactccttacaaatcagcagtactccactttataaa
aagaaagaacttaaccagttagaagacagatatgacaaagactacctcagcggtgaactg
ggcgataacctgaagatgaaaattcagatcttgctgcattaa
DBGET
integrated database retrieval system
