Apodemus sylvaticus (European woodmouse): 127685840
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Entry
127685840 CDS
T10613
Symbol
Fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04350
TGF-beta signaling pathway
asyl04518
Integrin signaling
asyl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127685840 (Fbn1)
09133 Signaling molecules and interaction
04518 Integrin signaling
127685840 (Fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127685840 (Fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
asyl00536
]
127685840 (Fbn1)
Glycosaminoglycan binding proteins [BR:
asyl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127685840 (Fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_PEAR1L
EGF_TEN
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
127685840
NCBI-ProteinID:
XP_052039429
LinkDB
All DBs
Position
5:complement(108159567..108358481)
Genome browser
AA seq
2873 aa
AA seq
DB search
MRRGGLLEVALAFALLLESYTSHGADTNLEAGSPKETRANRAKRRGGGGHDALKGPNVCG
SRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPSGQISPSCGSRSIQHCS
IRCMNGGSCSDDHCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCERD
YRTGPCFTVVSNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNIR
TGACQDVDECQAIPGLCQGGNCINTVGSFECKCPAGHKFNEVSQKCEDIDECSTIPGVCD
GGECTNTVSSYFCKCPPGFYTSPDGTRCVDVRPGYCYTALTNGRCSNQLPQSITKMQCCC
DLGRCWSPGVTVAPEMCPIRSTEDFNKLCSVPLVIPGRPEYPPPPIGPLPPVQPIPPGFP
PGPVIPVPRPPPDYPYPSASREPPRVLPFNVTDYCQLVRYLCQNGRCIPTPGSYRCECNK
GFQLDIRGECIDVDECEKNPCTGGECINNQGSYTCHCRAGYQSTLTRTECRDIDECLQNG
RICNNGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSIRNMCLNGMCINEDGSFKCIC
KPGFQLASDGRYCKDINECETPGICMNGRCVNTDGSYRCECFPGLAVGLDGRVCVDTHMR
STCYGGYRRGQCVKPLFGAVTKSECCCASTEYAFGEPCQPCPAQNSAEYQALCSSGPGMT
SAGTDINECALDPDICPNGICENLRGTYKCICNSGYEVDITGKNCVDINECVLNSLLCDN
GQCRNTPGSFVCTCPKGFVYKPDLKTCEDIDECESSPCINGVCKNSPGSFICECSPESTL
DPTKTICIETIKGTCWQTVIDGRCEININGATLKSECCSSLGAAWGSPCTICQVDPICGK
GFSRIKGTQCEDINECEVFPGVCKNGLCVNSRGSFKCECPSGMTLDATGRICLDIRLETC
FLKYDDEECTLPIAGRHRMDACCCSVGAAWGTEECEECPLRNSREYEELCPRGPGFATKD
ITNGKPFFKDINECKMIPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISP
DLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGICHNTEGSYRC
ECPPGHQLSPNISACIDINECELSANLCPNGRCVNLIGKYQCACNPGYHPTHDRLFCVDI
DECSIMNGGCETFCTNSDGSYECSCQPGFALMPDQRSCTDIDECEDNPNICDGGQCTNIP
GEYRCLCYDGFMASEDMKTCVDVNECDLNPNICLSGTCENTKGSFICHCDMGYSGKKGKT
GCTDINECEIGAHNCGRHAVCTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSQHA
DCKNTMGSYRCLCKDGYTGDGFTCTDLDECSENLNLCGNGQCLNAPGGYRCECDMGFVPS
ADGKACEDIDECSLPNICVFGTCHNLPGLFRCECEIGYELDRSGGNCTDVNECLDPTTCI
SGNCVNTPGSYTCDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVS
KASCCCSLGKAWGTPCELCPPVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQ
GGKCINTFGSFQCRCPTGYYLNEDTRVCDDVNECETPGICGPGTCYNTVGNYTCICPPDY
MQVNGGNNCMDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPI
PSTDEFATLCGSQRPGFVIDIYTGLPVDIDECREIPGVCENGVCINMVGSFRCECPVGFF
YNDKLLVCEDIDECQNGPVCQRNAECINTAGSYRCDCKPGYRLTSTGQCNDRNECQEIPN
ICSHGQCIDTVGSFYCLCHTGFKTNADQTMCLDINECERDACGNGTCRNTIGSFNCRCDH
GFILSHNNDCIDVDECATGNGNLCRNGQCVNTVGSFQCRCNEGYEVAPDGRTCVDINECV
LDPGKCAPGTCQNLDGSYRCICPPGYSLQNDKCEDIDECVEEPEICALGTCSNTEGSFKC
LCPEGFSLSSTGRRCQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCEL
CPTEPDEAFRQICPFGSGIIVGPDDSAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYI
LEGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPMMTCEDINECAQNPLLCA
FRCVNTYGSYECKCPVGYVLREDRRMCKDEDECAEGKHDCTEKQMECKNLIGTYMCICGP
GYQRRPDGEGCIDENECQTKPGICENGRCLNTLGSYTCECNDGFTASPTQDECLDNREGY
CFSEVLQNMCQIGSSNRNPVTKSECCCDGGRGWGPHCEICPFEGTVAYKKLCPHGRGFMT
NGADIDECKVIHDVCRNGECVNDRGSYHCICKTGYTPDITGTACVDLNECNQAPKPCNFI
CKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQH
HTACIDNNECTSDINLCGSKGVCQNTPGSFTCECQRGFSLDQSGASCEDVDECEGNHRCQ
HGCQNIIGGYRCSCPQGYLQHYQWNQCVDENECLSAHVCGGASCHNTLGSYKCMCPTGFQ
YEQFSGGCQDINECGSSQAPCSYGCSNTEGGYLCGCPPGYFRIGQGHCVSGMGMGRGGPE
PPASGEMDDNSLSPEACYECKINGYPKRGRKRRSTNETDASDIQDGSEMEANVSLASWDV
EKPASFAFNISHINNKVRILELLPALTTLTNHNRYLIESGNEDGFFKINQKEGVSYLHFT
KKKPVAGTYSLQISSTPLYKKKELNQLEDRYDKDYLSGELGDNLKMKIQILLH
NT seq
8622 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaggagggctgctggaggtcgcgctggcgttcgccctgctactcgagtcctac
acgagccatggggcggacaccaatctggaggctgggagcccgaaggagaccagagccaat
cgggccaagagaagaggcggcggaggacacgatgcgctgaaaggacccaacgtctgtgga
tcacgttataatgcatactgttgtcctggatggaaaaccttacctggtggaaatcagtgt
attgttcccatttgccggcattcctgtggggatggattctgctcgaggccaaatatgtgc
acttgcccgtctggtcagatatcgccttcctgtggctccagatccatccaacactgcagc
atccgctgtatgaatggaggcagctgcagcgatgaccactgtctatgccagaaggggtac
attggcactcactgcggacagcctgtctgtgaaagcggctgtctcaacggcgggaggtgt
gtggccccaaatcggtgtgcctgcacatacggctttactggaccccagtgtgaaagagat
tacagaacaggcccgtgtttcactgtggtaagcaaccagatgtgccagggacagctcagc
gggattgtctgcaccaaaacactctgctgtgccacagtaggcagagcctggggccacccc
tgtgagatgtgtcctgcccagcctcacccctgtcgccggggcttcattcccaacatccgc
actggagcttgtcaagatgtggatgaatgtcaggctatcccggggctgtgtcaaggagga
aattgcattaataccgttggatcttttgagtgcaaatgccctgctggacacaaatttaat
gaagtgtcacaaaaatgtgaagatattgacgagtgcagcactattcctggagtctgtgat
ggcggggagtgtacaaacacggtcagcagttacttctgcaaatgtccccctggtttttac
acctctcctgatggcaccagatgtgtagatgttcgccctggttactgctacacggctctg
accaacgggcgctgctctaaccagctgccacagtccataaccaaaatgcagtgctgttgc
gatcttggccggtgctggtctccaggggttactgtcgctcccgagatgtgtcccatcaga
tcgactgaggatttcaacaagctgtgctccgtccctctggtaattcccgggagaccagag
tatcctcccccacccattggcccccttcctccggttcagcccattcctcctggctttcct
cctgggcctgtgataccagtccctaggccaccgccagattatccatatccgtctgcgtcg
cgggaaccaccaagggtgctgcctttcaacgttactgactactgccaattggtccgctat
ctctgtcaaaacgggcgctgcattccgactcccggaagctaccgctgtgagtgcaacaag
ggcttccagctggatatccgcggcgagtgcatcgatgttgatgagtgtgagaaaaacccg
tgcactggtggagagtgtatcaacaaccagggctcctatacctgtcactgccgagctggt
taccagagcacactcaccagaaccgagtgcagagacatagatgagtgccttcagaacggc
cggatctgcaacaatggtcgctgtatcaacacagacggtagcttccactgcgtgtgcaat
gcgggctttcacgtcactcgggacggaaagaactgtgaagatatggatgagtgcagcatc
agaaacatgtgcctaaatggaatgtgtatcaatgaagatggaagtttcaagtgtatttgc
aaacctgggttccagctggcatcagatggccgctactgcaaagatatcaatgagtgtgag
actcctgggatctgcatgaacggacgctgtgtgaacactgatggctcctacagatgcgaa
tgcttccctggattggctgtgggtctagatgggcgtgtgtgtgttgacacacacatgcgg
agcacatgctacggaggatacaggagaggccagtgtgtgaagccattgtttggtgctgtt
accaaatcagaatgctgctgtgccagcaccgagtatgcatttggggaaccctgccagccc
tgtcctgcacagaattcagcggagtatcaggcgctctgcagcagtggaccggggatgaca
tcggcaggcactgatataaacgaatgtgcattagatcctgatatttgcccaaatggaatt
tgtgaaaatctccgcgggacctacaaatgtatatgcaattcgggatatgaagtagacata
actgggaaaaactgtgttgatattaatgagtgtgtgctgaacagtctactttgtgacaat
ggacaatgtcgaaacacccctggaagttttgtctgtacctgccccaagggatttgtgtac
aaacctgacctaaaaacctgtgaagacattgatgaatgtgaatcgagtccctgcattaat
ggagtctgcaagaacagccctggctctttcatttgtgaatgttctcctgaaagtactctg
gatccaacaaaaaccatctgcatagaaaccatcaagggcacttgctggcagactgtcatc
gacgggcgctgtgagatcaacatcaacggagccaccctgaagtccgagtgctgctcctcc
ctcggtgctgcctgggggagcccgtgcaccatatgtcaagttgatcccatatgtggtaaa
gggttctcaagaattaaaggcacacaatgtgaagatatcaacgagtgtgaagtgttccca
ggagtatgcaagaatggcctgtgtgtcaactccaggggttcgttcaagtgcgagtgtccc
agtggaatgactttggatgctacaggaagaatctgccttgacatccgcctggagacctgc
ttcctgaagtacgacgatgaagagtgcaccttgcccatcgctggccgccacagaatggat
gcctgctgctgctctgttggggcagcctggggaacggaagagtgtgaggagtgtccactg
agaaacagccgggagtatgaggagctctgtccccgagggcctgggtttgccacaaaagac
attacaaatgggaaacctttcttcaaagatatcaatgagtgtaagatgatacccagcctc
tgtacccacggcaagtgcaggaacaccattggcagcttcaagtgcagatgtgacagcggc
tttgctctggattctgaagagaggaactgcacagacattgatgagtgccgcatatctcct
gacctctgtggccggggccagtgtgtgaataccccaggggactttgaatgcaagtgtgac
gaaggctatgaaagcggcttcatgatgatgaagaactgcatggatattgatgaatgtcag
agagatcctctcctatgccgaggaggcatctgccacaacacagagggaagttatcgctgt
gaatgtcctcctggtcaccaactgtctccaaacatctctgcgtgcattgacatcaacgag
tgtgaactgagcgcaaacctctgtcccaatgggcgttgtgtgaacctcatagggaagtac
cagtgtgcctgcaacccgggttatcaccccactcatgataggcttttctgtgttgacatt
gatgaatgcagcataatgaacggtggctgtgagaccttctgcacgaactcggacgggagc
tacgaatgcagctgtcagcccggcttcgcgctgatgccagaccagcgatcgtgcacagac
attgatgagtgtgaagataaccccaatatctgtgatggtggccagtgcacaaacatacct
ggagagtacaggtgcctgtgctatgacgggttcatggcgtctgaagacatgaagacttgt
gtggatgtcaatgaatgtgacctgaatccgaacatctgcctcagtgggacctgtgaaaac
actaaaggctcattcatctgccactgtgatatgggctattcagggaagaaggggaaaacg
ggctgcacagatatcaatgaatgtgagattggagcacacaactgcggcagacatgctgta
tgcacaaatacagcggggagcttcaagtgcagctgcagtcctggctggattggagatggc
attaagtgcacagatctggatgaatgctctaatggaacccacatgtgcagccaacacgcg
gactgtaaaaacaccatggggtcatatcgctgtctctgtaaggatggctatacaggggat
ggcttcacctgtacagacctcgacgagtgctctgagaacctgaacctctgcggcaatggc
cagtgcctcaacgcccctggcgggtaccgttgtgaatgtgacatgggcttcgtgcccagt
gctgacgggaaggcctgtgaagatatcgatgagtgctcccttccaaacatctgtgtcttt
ggaacgtgccacaacctcccgggcctcttccgttgcgagtgtgagattggctacgaactg
gaccgaagtggtgggaactgcacagatgttaatgagtgtctggatccaaccacctgcatc
agtgggaactgtgtcaacactccgggtagttacacatgtgactgtcctccagattttgag
ctgaatccaacacgagtcggctgtgtcgatactcgctctggaaactgctatctggatatc
cggccccgtggagacaatggagatacagcctgcagcaatgaaatcggagttggtgtttct
aaagcttcctgctgttgttcgctgggtaaagcttggggaaccccatgtgagctgtgtcct
cctgtgaacacatctgagtataaaattctttgccctggaggagaaggttttcgtccaaat
cccatcactgtaatattggaagacatcgatgagtgccaggagctcccggggctgtgccaa
ggggggaagtgcatcaacacctttggcagcttccagtgtcgctgtccaactggttactac
ctgaatgaagacacacgagtgtgtgatgatgtgaatgaatgtgagactcctggaatctgt
ggtccggggacatgttacaacactgttggcaactacacctgcatctgtcctccagactac
atgcaagtgaacgggggaaataattgtatggacatgagaagaagtctatgctacagaaac
tattacgctgataaccagacttgtgatggagaactcctgttcaacatgaccaagaagatg
tgctgttgctcctacaacatcggcagagcctggaataaaccctgcgaacagtgtcccatc
ccaagcacagatgaatttgctaccctctgtggaagccagaggccaggttttgtgattgac
atttacactggtttacccgtggatattgatgaatgccgggagatccctggggtctgtgaa
aatggagtgtgcatcaacatggttggcagcttcaggtgtgagtgtccggtgggattcttc
tataacgacaagttactggtctgtgaagatatcgatgagtgtcagaacgggcccgtgtgc
cagcgcaatgcggaatgcatcaacactgcaggcagctaccgctgtgactgtaagcctggc
taccgcctcacctccacgggccaatgcaatgatcgaaatgagtgccaagaaatcccgaac
atatgcagtcatggtcagtgcattgacactgtgggaagcttctactgcctttgtcacacc
ggcttcaaaacaaatgcagatcagaccatgtgcttggacataaatgagtgtgagagagac
gcctgtgggaacgggacttgtagaaacacgattggctccttcaactgccgctgcgaccat
ggcttcatactgtctcacaacaatgactgcatagatgttgatgaatgtgcaactggaaac
gggaacctttgcagaaatggccagtgtgtcaacacggtggggtcctttcagtgcagatgc
aatgaaggctacgaggtggctcctgatggcaggacctgcgtggatatcaatgaatgtgtt
ctggatccggggaaatgtgcacctggaacatgtcagaacttggatggctcctacagatgc
atctgcccacctgggtacagtctacagaatgacaaatgcgaagatattgatgagtgtgtt
gaagagccagaaatttgtgctttggggacctgcagcaacactgaggggagcttcaaatgt
ctgtgtccagaagggttctccctgtcctctactggaagaaggtgccaagatttgcgaatg
agctactgctatgcaaagtttgaaggtgggaagtgttcatcacccaaatccagaaaccat
tccaagcaggagtgctgctgcgctttgaagggagaaggctggggagacccttgtgagttg
tgccccacagagccagatgaggctttccgccagatctgcccctttggaagtgggatcatc
gtgggccctgacgactccgcggttgatatggatgaatgcaaagaacctgatgtctgtaaa
catgggcagtgcatcaacacagacggctcctatcgctgcgagtgtccctttggttatatt
ctggaaggcaatgaatgtgtggatactgatgaatgctccgtgggcaatccgtgtggaaac
gggacctgcaagaatgtgattggaggttttgagtgtacctgtgaggagggattcgagcct
ggtccaatgatgacatgtgaagatataaatgaatgtgcccagaatcctctactctgtgcc
ttccgctgtgtaaatacctatgggtcctatgaatgcaagtgccctgttggatatgttctg
cgagaagataggaggatgtgtaaagatgaggatgagtgtgcagagggaaaacatgactgt
actgaaaagcaaatggagtgcaagaatctcatcggtacctacatgtgcatctgcggccct
gggtaccagcgcagacccgatggagagggctgcatagatgagaatgagtgtcagaccaag
cccgggatctgtgagaacgggcgctgcctcaacaccctggggagctacacctgtgagtgt
aacgatggcttcacggccagccccactcaggacgagtgcttggacaaccgggaaggatac
tgcttttccgaggtcctgcaaaacatgtgccagattggctcaagcaacaggaaccccgtc
accaagtccgagtgctgctgtgatggagggagaggctggggaccccactgtgagatctgc
cctttcgagggcacagtggcttacaagaagctgtgtccccatggccgaggattcatgacc
aacggagcagacattgatgagtgcaaggttattcacgatgtttgccgaaacggggagtgt
gtcaatgacagagggtcatatcactgcatctgtaaaactggctacactccggatataaca
ggaactgcctgcgtagatctgaatgagtgcaaccaggctcccaaaccctgcaattttata
tgcaagaacacagaggggagttaccagtgctcctgcccgaagggctatattctgcaggag
gatggaaggagctgcaaagatcttgatgagtgtgcaaccaagcagcataactgtcagttc
ctctgtgttaacaccatcggtggcttcacatgcaaatgccctcctgggtttacccagcac
cacactgcctgtatcgataacaatgagtgcacatctgatatcaacctgtgtgggtccaag
ggcgtttgccagaacactccagggagcttcacctgtgaatgccagaggggattctcactg
gatcagagtggtgccagctgtgaagatgtggacgagtgtgagggtaaccaccgctgtcag
catggctgccagaacatcattggaggctacagatgtagctgcccccagggctacctccag
cactaccaatggaaccagtgtgtagatgaaaacgagtgcctgagtgcacacgtctgcggg
ggagcctcctgccacaacaccctgggcagttacaagtgcatgtgtcccaccggcttccag
tatgaacagttcagcggcggctgccaagacatcaacgagtgtggctcgtcccaggccccc
tgcagctatggatgctccaacactgagggtggctacctgtgtggctgtcctccggggtac
ttccggatagggcaaggccattgtgtttctggaatgggcatgggccgaggtggccctgag
ccacctgccagcggtgagatggacgacaactcactgtccccagaggcctgctatgagtgt
aagatcaatggctatccaaaacgaggcaggaaacggagaagcacaaacgaaacggatgcc
tctgacatccaggatgggtctgagatggaagccaacgtgagcctcgccagctgggatgtg
gagaagccagctagctttgctttcaatatttcccatatcaataacaaggtccgaatccta
gaactcctgccggcccttacaactctgacgaaccacaacagatacttgattgaatctgga
aatgaagatggcttctttaaaatcaaccagaaagaaggggtcagctacctccacttcacg
aagaagaagccagtggctggaacctactccttacaaatcagcagtactccactttataaa
aagaaagaacttaaccagttagaagacagatatgacaaagactacctcagcggtgaactg
ggcgataacctgaagatgaaaattcagatcttgctgcattaa
DBGET
integrated database retrieval system
