KEGG   Apodemus sylvaticus (European woodmouse): 127685990
Entry
127685990         CDS       T10613                                 
Symbol
Smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127685990 (Smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:asyl03041]
    127685990 (Smndc1)
Spliceosome [BR:asyl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    127685990 (Smndc1)
 Complex B
    127685990 (Smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    127685990 (Smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 127685990
NCBI-ProteinID: XP_052039743
LinkDB
Position
1:7956729..7968575
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAVYGNAEVTPLL
NLKPVEEGRKAKEDSGSKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagctaaacagttggctagctacaaagctcagctccagcaagttgaa
gctgctctatcgggaaatggagaaaatgaggatctgctgaaactgaagaaggatttgcaa
gaagtaatagaactgaccaaagaccttctgtcaactcaaccttcggaaactcttgcaagt
tcagacagttttgcttctacccagcctactcattcatggaaagtaggggacaaatgcatg
gccgtctggagtgaagatggacagtgttatgaagcggagatcgaagagatagacgaagaa
aatggcaccgctgcaatcacctttgctgtttacggcaatgccgaagtgacgccgttgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagcggcagcaaacccatg
tccaaaaaagaaatgattgcccagcagcgtgaatataaaaagaaaaaagctttgaaaaaa
gcacagagaataaaagagcttgagcaggagcgagaggaccagaaggtgaaatggcagcag
ttcaacaacagggcgtactcgaagaacaagaaaggccaggtaaagaggagtatttttgct
tcgccagaaagtgtaacaggcaaagttggagtaggaacttgtggaattgccgacaagccc
atgacacagtatcaagatacatctaaatacaacgtcaggcatttgatgcctcagtaa

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