Apodemus sylvaticus (European woodmouse): 127687549
Help
Entry
127687549 CDS
T10613
Symbol
Nlrc4
Name
(RefSeq) NLR family CARD domain-containing protein 4 isoform X1
KO
K12805
NLR family CARD domain-containing protein 4
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04621
NOD-like receptor signaling pathway
asyl05132
Salmonella infection
asyl05134
Legionellosis
asyl05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127687549 (Nlrc4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127687549 (Nlrc4)
05135 Yersinia infection
127687549 (Nlrc4)
05134 Legionellosis
127687549 (Nlrc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
asyl04054
]
127687549 (Nlrc4)
Pattern recognition receptors [BR:
asyl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127687549 (Nlrc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_Nlrc4
NACHT
NLRC4_HD
CARD
LRR_14
AAA_16
nSTAND_NTPase5
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
127687549
NCBI-ProteinID:
XP_052042238
LinkDB
All DBs
Position
6:116106984..116134383
Genome browser
AA seq
1041 aa
AA seq
DB search
MNFIKDNSQALIQRMGITVTKQICDDLFALKVLNDQEVAIVCCERVEQEAARKIVHMILK
KGSVACNLFLKSLEDWDYFVYQDLTGQNLFYQITDEDLNVLAQNLKDLYDSPAFLNFFPL
GEDIDIIFNLKITFTEPVLWRKDHRHHRVEQLTLGGLLEALKSPCLIEGESGKGKSTLLQ
RIAMLWASGKCVALNGFKLVFFIRLSSARGGLFDTLCDQLLNMPDSISKPTFRALLLKLQ
KEVLFLLDGYNEFHPQNCPEIEALIKENHRFKNMVIVTTTTECLRHIRHVGALTAEVGDM
TEDSAQVLIREVLINELAESLLLQIQESRCLRNLMRTPLFVVITCAIQMGRKEFQAHTQT
MLFQTFYDLLIQKNRHRHKGGTSSDFVRSLDYCGDLALEGVFSHKFDFEPEDVSGRNEDV
LVATGLLCKYTAQRLRPKYKFFHKSFQEYTAGRRLSSLLMSREPEEVNRGNSYLKKMASI
SDITSLYGNLLLYTCGSSTEATRVVMRHLAMVYQHGSLQGLSVTKRPLWRQESLQSLRNT
TEQDLLKAININSFVECGINLFSESISKSALSQEFEAFFRGKSLYINSENIPDYLFDFFK
YLPNCASALDFVKLDFYGRATVSQDKAAEDGPGVHTEGSSETYIPPRAVSLFFNWKEEFK
TLEVTLRDISKLNKKDIKYLGKIFSSATNLQLYVKRCAAVTGRLSAVLRTCKNIHSLMVD
ASPLTTDDEQHITSVTNLQNLSIHRLHTQQLPGGLVDSLGNLKNLEKLILDDIRMNEEDA
KGLAEGLRNLKKMRLFHLTHLSDIGEGMDYIVKRLSEEPCDLRELKLVACCLSANSVKIL
AQNLHNLVKLSILDISENCLEKDGNEALQELIGRLGVPEQLTTLMLPWGWDVHLSLPKLL
KQLEGAPGLAKLGLKNWRLRDSEIRSLGEFLERNPLRDLQQLDLAGHCVSSDGWLPFMDV
FENLKQLVFFDFSTEEFLPDAALVRKLSQVLSKLTLLQEVRLIGWELDDYDISIIKGTFK
LVTAYPKPPNTPGTPSLPVDH
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaactttataaaggacaacagccaagccctcattcaaaggatgggcataacagttaca
aagcaaatctgtgatgatctgtttgcactgaaagttctcaacgaccaagaagttgccata
gtttgctgtgagcgtgtggagcaggaggccgcacgaaagatcgtccacatgattttgaag
aagggctcagtggcctgcaacctctttctcaagagtcttgaagactgggactattttgtg
tatcaggacttaactggacaaaatcttttttaccagatcacagatgaagacttgaatgtt
ttggcccagaatttaaaggacttatacgacagccctgcttttctgaacttctttcccctg
ggtgaagatatcgacatcatttttaatctgaagatcaccttcacagaacctgtcttgtgg
aggaaggaccatcgccatcaccgcgtggagcagctgactttgggaggcctgctggaggcc
cttaagagcccctgcctaattgaaggagaatctggcaaagggaagtccaccctgctgcag
agaattgcaatgctctgggcctcaggaaagtgcgtggctctgaatgggttcaaattggtc
ttcttcatccgcctgagcagtgccaggggcggactgtttgacacattgtgtgaccagctc
ttgaacatgcctgactccatcagcaagccaaccttcagggctctgctgctgaagctacaa
aaggaggtcctctttcttctcgatggttacaatgaattccatccccagaactgcccagaa
atcgaggccctgataaaggaaaaccatcgtttcaagaacatggtcattgtcaccaccacc
acagagtgcctgagacacatcagacacgttggcgccctgactgcggaggtgggagatatg
acggaagacagtgcccaagttctcatcagggaagtgctgataaatgagttggctgaaagc
ctgttgctccagattcaggagtccaggtgcttgagaaatctgatgaggacccctctcttc
gtggtgatcacctgtgcaattcagatgggcagaaaggaattccaagctcacacacaaacc
atgctgttccaaaccttctacgacctcctgatacagaaaaacaggcacaggcacaaaggt
ggaacttcgagtgattttgtcaggagcctcgactactgtggagacctggccctggagggt
gtgttctcccacaagtttgattttgaacccgaggatgtgtccggcaggaatgaggacgtc
ttggtggcaactgggctcctctgtaagtacacagctcagagactgaggcccaagtataaa
ttctttcataaatcatttcaggagtacacagcaggccggagactcagcagtttgctgatg
tccagagagccagaggaggtgaacaggggaaatagctacttaaagaaaatggcctccatc
tctgacatcacatccctgtatggcaatctgctcctgtacacgtgtgggtcatccacagaa
gcaaccagggttgtcatgaggcaccttgcaatggtatatcagcatggcagcctacaagga
ctttctgtcaccaagaggcctctctggaggcaggaatcattacaaagcctgagaaatacc
accgagcaagatcttctgaaagccatcaacataaattcctttgtagagtgtggcatcaat
ttattctcagagagtatatctaaatcagccctgagccaagaatttgaagctttcttccga
ggtaaaagtttatacatcaactcagagaacatccctgactacttgtttgacttctttaaa
tacttgcctaattgtgcaagtgcactggacttcgttaagctggatttctatggaagagca
acagtgtcacaggataaggcggcagaggatggccctggagttcatacagaagggtcctca
gaaacctacattccccccagggctgtgtctttattcttcaactggaaggaggaattcaag
actctagaggtcacactcagagatattagcaagttgaataaaaaagatatcaaatacctg
gggaagatattcagctctgccaccaacctccagctgtatgtcaagagatgtgcagccgtg
actggaaggctcagcgcagtcctcagaacctgcaagaacatccattccctcatggtggac
gctagtcccctcaccacggacgacgagcagcacatcacatctgtgacaaacctccagaac
ttaagcattcaccgcctgcacactcaacagctgccaggtggtcttgttgacagcttgggt
aatctgaagaacctcgagaaactcatactggacgacattaggatgaacgaggaagacgct
aaaggcctagcagaaggcctgcgaaacctgaagaagatgcgtttattccatttgactcat
ttgtctgacattggggaggggatggattacatagtcaagcgtctctcagaagaaccctgt
gatctacgagagttgaagttggtggcctgctgtctgagtgcaaattctgtgaagattcta
gcacagaatcttcacaatttggtaaagctgagcattctcgatatatcagaaaattgcctg
gaaaaggacggaaatgaagctctgcaggaactgatcggcaggctcggcgttccggaacag
ctcaccacactgatgctgccttggggctgggatgtgcacctcagcctgcccaagctgctg
aagcaattggagggggccccggggctcgccaaacttggattgaaaaactggagactcaga
gactcagagattagaagtttaggtgagtttttggagaggaatcctctgagagacttgcag
cagttggatttagcgggacactgtgtgagcagcgatgggtggcttcccttcatggatgtg
tttgagaatcttaagcagttagtattttttgactttagcactgaagagttcttaccagac
gcagcactggtgaggaagcttagtcaagtgttatctaagttaactcttctgcaggaggta
aggctcataggctgggagctggacgactatgacatcagcattattaaaggcacctttaag
ctagtgactgcttaccccaagccaccaaatactccggggactccctcacttccagtggat
cattaa
DBGET
integrated database retrieval system
