Apodemus sylvaticus (European woodmouse): 127688546
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Entry
127688546 CDS
T10613
Symbol
Rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127688546 (Rnf123)
Enzymes [BR:
asyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127688546 (Rnf123)
Ubiquitin system [BR:
asyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127688546 (Rnf123)
Multi subunit type E3
KPC complex
127688546 (Rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
HDV_ag
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
127688546
NCBI-ProteinID:
XP_052043253
LinkDB
All DBs
Position
7:15548586..15576209
Genome browser
AA seq
1321 aa
AA seq
DB search
MASKGAGMSFSRKSYRLTSDAEKSRVTGIVQEKLLSDYLYRVFSSPDRGPPAAISSILSL
PRKPLNFHNLPEHVDQLLQVDSEDGESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLG
VIGHSNFGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYD
GNRVRKWNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYF
PAISLSFKESVAFNFGSRPLRYPVAGFRPLQDPPFADLVRAQKLLGCFQAVLSVELDPVE
GRLVETDCSEWQLRGQPTVLLTLAHIFQHFAPLLRKVYLVEAVLMGFLLGIVEKGTPEQA
QSVVHQILDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLRLTMSILRH
EKSRKFLLSNVLFDMLRSVVFFYIKSPLRVEEAGLKELIPTTWWPHRSSREDRDGREAQE
EETAEERQRRRAYERGCQRLKKRIEVVEELQVQILKLLLDNKDDNGGEASRYIFLTKFRK
FLQENASGRGNTPVLCPPEYMVCFLHRLVSALRFYWDEYRASNPRASFSEEAYIPPQIFY
NGKVDYFDLQRLGGLLSHLRKTLKDDLASKANIVIDPLELQAATMDDLDEDDEPAPAAAQ
RPIQALAIGGALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRLLSTMEKVKVRSLNVE
QRTREDIEGSHWNEGLLLGRPPEEPEQPLTENSLLEVLDGTVMMYNLSVHQQLGKMVGVS
DDVSEYAMALRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQE
KMLDIYWLLRVCLRTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGY
EETLTRLAAILAKHFADPRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRIAMVRN
LLAPYEQRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQ
HMADLLRQGSDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCAT
CFDLSVSLLRVLEMTITLVPEIFLDWSRPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVV
TLRLPGLESVDHYPILVAVTGILVRLLVHGPASETEQATSVLLADPCFQLRSICYLLGQP
EPLAPGTASPAPDRKRFSLQSYTDYISAEELAQVEQMLAHLTAASAQAAAASLPTNEEDL
CPICYAHPISAVFQPCGHKSCKACINQHLMNNKDCFFCKATIVSVEDWDKAANTSATSSA
T
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagggggctggcatgtctttctcccgaaagagctataggctgacctcagat
gctgagaagtccagagtcacaggcattgtgcaagagaaactactgagcgactacctgtac
cgggtcttttcttctcctgaccgtgggccccctgcagccatcagcagcatcctctcgctc
cctaggaaaccgctgaacttccataatctgccagagcacgtggaccagctgctacaggtg
gacagtgaggacggcgagagccagggacaagtggaaggccgtcttggcccatctactgtg
gtcctagaccacacaggaggctttgaggggcttctcctggtggacgatgacctcctgggg
gtgattggacacagcaactttggcactatccgttctaccacatgtgtatacaaagggaag
tgggtctacgaggtgctcatctcctcccagggcctcatgcagatcggctggtgtaccatc
aactgccgctttaatcaggaggaaggggttggagacacacataactcctacgcctatgac
gggaacagagtgcgcaagtggaacgtgaccacaacaaattacggcaaggcatgggcagcg
ggggacattgtgagctgcctgattgatctggatgatggcactctgtccttttgcctgaat
ggagtgtcactgggcaccgccttcgagaacctttccaggggcctaggaatggcgtacttc
ccagccatcagcttgtcgttcaaggagtctgtggccttcaactttggcagccgtcctttg
cgctacccagtggcgggcttccggcccctacaggaccctccgtttgctgacctggtccgg
gcacagaagctgctgggctgcttccaggcagtgctaagtgtggagctggaccctgtggaa
gggcggctggtggagacagattgttctgagtggcagctgcgagggcagcccactgtcctc
ctcacgctggcccacatcttccagcacttcgcaccactgctgcgcaaagtatacctagtg
gaggctgtgctgatgggcttcctgctgggcatcgtggagaagggcacccctgagcaggcg
cagtctgtggtacaccagatcttggacctcttgtggctcttcatggaggactatgaggta
caggattgcctcaagcagttgatgatgtctctgctacgtctctaccgattctcgcccatt
gttccagacctgggtctacagatccactacctgcgcctcactatgtccatcctgagacac
gagaagtcccgcaagttcctgcttagcaatgtcctttttgacatgctccggtccgtggtc
ttcttttatattaagagccccctgcgtgtggaggaagctggcctgaaggaactcattccc
accacctggtggccccatcgctccagcagggaggacagagacggtcgggaagcacaggag
gaggagaccgccgaggagcggcagaggaggcgagcctacgagcgtgggtgccaaagactc
aagaaacgcattgaagtggtggaagagctgcaggtccagatcctgaagctactgttggac
aataaagatgacaatgggggtgaagcttctaggtacatctttctgacaaaattccgaaag
ttcctgcaggagaatgccagtggccgggggaacacgcccgtgctctgcccccctgagtat
atggtgtgcttcctccaccggctggtgtccgccttgcgcttctactgggatgagtacaga
gcttccaacccccgcgcttccttcagtgaggaggcttatatcccaccccagatcttctat
aacggcaaggtggactacttcgaccttcagcgcctcgggggcctcctctcacaccttcgg
aagacccttaaagatgaccttgcttccaaagccaatatcgtgattgaccccctggagctc
caggcggccaccatggacgacctggacgaggatgatgagccggcccccgcagcggcccag
cgtcccatacaagccctggccataggaggggccctgcccctgccccggccaggctggctc
agttctccaaccctgggcagagccaaccgcttccttagcacagcagctgtgagcctcatg
acccctcggcgacttctgagcaccatggagaaagtaaaagtgcgctcgctgaatgtggaa
cagaggactcgtgaggacattgagggcagccactggaatgagggcctgctgttggggagg
ccccctgaggagcctgagcagccgcttacggagaactcgctgttggaagtcctggacggc
acagtcatgatgtataatctcagcgtgcaccagcagctgggcaagatggtgggtgtgtcg
gatgatgtcagcgagtatgcaatggccctgagagacacagaggacaagctgcgtcggtgc
ccaaagaggaggaaggatatccttgcagagttgaccaagagccagaaggttttctcagaa
aagctggaccacctgagccgcaggcttgcctgggtccacgccactgtctactcacaggag
aaaatgctggatatctactggttattgcgtgtgtgcctgcggaccatcgagcatggggat
cgcacggggtctctctttgccttcatgcccgagttctacctaagtgtggctatcaacagc
tacagcgcccttaagaattactttggccctgtgcacagcatggaggagctcccaggctat
gaagagaccctgacgcgcttagctgccatcctcgccaaacacttcgctgaccctcggata
gtaggcactgacattcgagactcactgatgcaggccctggccagctatgtgtgctatcca
cactcactgcgggctgtggagcggatccctgaggagcagcgcatcgccatggtgaggaac
ctgttggccccctatgagcaacggccctgggcccagaccaactggatcctggtgcggctt
tggcggggctgcgggtttgggtatcgctacacacggctgccacatctgctgaaaaccaag
ccagaggatgccaatttgcccagcctccaaaagccctgcccttcaaccttgctgcagcag
cacatggcagacctactgcgacaaggttctgatgtggcaccaagcttcctcaacagcgtc
cttaaccagctcaattgggccttctctgagttcatcggcatgatccaggagattcaacag
gccgctgagcgcctggagcggaactttgtggacagccggcagctcaaggtctgtgccacc
tgctttgacctgtcagtcagcttgttgcgtgtcttggagatgaccatcactctggtacct
gaaatattccttgactggtcccgccctacctctgagatgctgcttcggcgtctggcacag
ctgctgaaccaggtgctgaaccgggtgacagctgagaggaacctgtttgatcgtgtagtg
accctacggctacctgggctggagagtgtggaccactaccctatcctggtggcagtgacc
ggcatcctggtacgcctcctggtgcacggtccagcctcagagacagagcaagccacctct
gtgctcctggctgacccctgtttccagcttcgctctatatgctatctcctggggcagcca
gagcccctagcacctggcactgcctcgcctgcccccgaccggaagcgcttctctctacag
agttatacggattacatcagtgctgaggagctggcccaggtggaacagatgctggctcac
ctgaccgctgcgtctgcccaggcagctgctgcctccctgcccaccaatgaagaggacctc
tgccccatctgctatgcccaccccatctctgctgtgttccagccttgtggtcacaaatcc
tgcaaagcctgcatcaaccagcacctgatgaacaacaaggactgcttcttctgcaaagcc
accattgtctctgtagaggactgggacaaggcagccaacacaagtgccacgtcctcagcc
acctag
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integrated database retrieval system
