KEGG   Apodemus sylvaticus (European woodmouse): 127693654
Entry
127693654         CDS       T10613                                 
Symbol
Brca1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl01524  Platinum drug resistance
asyl03440  Homologous recombination
asyl03460  Fanconi anemia pathway
asyl04120  Ubiquitin mediated proteolysis
asyl04151  PI3K-Akt signaling pathway
asyl05206  MicroRNAs in cancer
asyl05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127693654 (Brca1)
  09124 Replication and repair
   03440 Homologous recombination
    127693654 (Brca1)
   03460 Fanconi anemia pathway
    127693654 (Brca1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    127693654 (Brca1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    127693654 (Brca1)
  09162 Cancer: specific types
   05224 Breast cancer
    127693654 (Brca1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    127693654 (Brca1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:asyl01009]
    127693654 (Brca1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asyl04121]
    127693654 (Brca1)
   03036 Chromosome and associated proteins [BR:asyl03036]
    127693654 (Brca1)
   03400 DNA repair and recombination proteins [BR:asyl03400]
    127693654 (Brca1)
Enzymes [BR:asyl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127693654 (Brca1)
Protein phosphatases and associated proteins [BR:asyl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127693654 (Brca1)
Ubiquitin system [BR:asyl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127693654 (Brca1)
  Multi subunit type E3
   BRCC complex
    127693654 (Brca1)
Chromosome and associated proteins [BR:asyl03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     127693654 (Brca1)
DNA repair and recombination proteins [BR:asyl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     127693654 (Brca1)
    BRCA1-A complex
     127693654 (Brca1)
    BRCA1-B complex
     127693654 (Brca1)
    BRCA1-C complex
     127693654 (Brca1)
    BRCA complex
     127693654 (Brca1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     127693654 (Brca1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_2 BRCT_2 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 zf-RING_6 zf-ANAPC11 zf-Nse zf-RING_10 Prok-RING_4 RTT107_BRCT_5 zf-rbx1
Other DBs
NCBI-GeneID: 127693654
NCBI-ProteinID: XP_052050630
LinkDB
Position
10:21433167..21495113
AA seq 1803 aa
MDLSAVRIQEVQNVLHAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQ
CPLCKNEITKRSLQRSTRFGQLVEELLKTIDAFELDTGVQFVNGFGFSKKKNNSFEHLNE
EASIIQSVGYRNRVKRLGQIESGNAAAKDSLSVQLSNLGIVRSVKKDRQTQPRNKSVYIE
LESDSSEEIVNKPDNFSVRDQELLQISPQGAGDEGKFHSAKEDACEFSGGIRNIEHHQCS
DKDLNPTENHATERHPEKCQSISVSNVHVEPCGPDAHAGSLQHETSRLLLTEDRTNAEKA
EFCNKSKQSGVAVSQQSRWAESKETRNGRQDPSTEERVGPNADSLCGRKKWTHPKSLCPE
NSGAATDVPWITLNSSIQKVNEWFSRTGEMLTSDSASDRRHESNADAAIVVEVSNEVDGC
FSSSKKTDLVAPDPYNTSRCKSGKDFSKPVEDNISDKIFGKTYQRRGSRPSLSHVTEITG
IFTTAPQITQEQPFTNKLKRKRSTCLRPEDFIKKADLAVVQRTPENINQRTDQMEPSDQA
VSITSNCQENKTTGNSLQKENNAHPIESLRKEPAFTAKAKCLSNSISDLEVELNVHSSKA
PKKNRLRRKSSTKCVLPFEPVSRNPSPPRAELQIDSCGSSEETKKNNSNQMPARHIREPQ
LIEASETAADAKKSEPNEHTRKRSASDAFPEEKLMNKAGLLTSCSNPRRPQGPVSPSPQR
KGVEQLETFQMPDNTKELRDLVLAGEPSGKPTDRSEESTSVSLVPDTDYDTENSVSVLET
NAVRNARTGSIQCMTQFIASENPKELVRGSNNADSGTECFKHPLRHELNHSQETIEMEDS
ELDTQYLQNTFQVSKRQSFALFSKPRSPQKDIVHSVPSRELSPKVTSKGKQIECQGQEDS
EISHVQAVTAAAGFPVLCQGGKPVADTTCAGVSRLCPSSHYRSGANGLSTTGKTGISQNS
HFKQSVSPIRSSIKTNSRKPLTEGRLEKHTSSSEKAIGNETIVQSTVHSISQNNKGNACQ
KASSGSINEVCSTGENLQEQLGRNRGPEVNTMLPLDGTQPSVCELRVLLSDKLLEIKKQE
GEAVGADFSPCLFSDHEQSMRSGKIFQVCSETPDDLLDDVEIQENTSFGGGDIMERSAVF
NGSVLRRESSRSPSPVALVSMSRGLHRGSRKLESSEESDSTEDEDLPCFQHLLSRSNTHE
LTRCSSVVTQQMSEKAEGTQAPWKGSISDCNNEVVLMEASQEHQFSEDAKYSGSMFSSQH
SAAQRSTTNANSQDPSFNPPSKQSGLQFENEEAILSDKELISDNEEMAACQEEDNDQEED
SIIPDSASGYESETNLSEDCSQSDILTTQQRATMKDNLIKLQQEMAHLEAVLGQHGNQPS
GHSPSLLADPCALGDLPDLEQNMSGTAISTSKNINENPVSQNLKRTCDDKFQPQHLDGPT
SGDNESGMERPSPFKSPLSGSRRSAQGRSRGIQTRDPPSQEELLQPVESETSCEPHNLTG
GSCVPRQDLDGSPYLESGISLFSSRDPESESPKEPAHVCTTPASASALKIFHGQVAESFR
SPASGATRPALTSSKSRVDKEISMVVSGLTPKEVMIVQKFAEKYHLTLTDAITEETTHVI
IKTDAEFVCERTLKYFLGIAGGKWIVSYSWVIQSIQERKLLNVHEFEVKGDVVTGRNHQG
PRRSRESREKLFKGLQVYCCEPFTNMPKDELERMLQLCGASVVKELPSLTHDTGAYPVVI
VQPSAWTEDNNCPDIGQLCKARLVVWDWVLDSISVYRCRDLDAYLVQNVTCGPESSEPQD
SND
NT seq 5412 nt   +upstreamnt  +downstreamnt
atggatttatctgctgttcgaattcaagaagtacaaaatgtccttcatgccatgcagaaa
atcttagagtgtccaatctgtttggaactgatcaaagaaccggtttccacaaagtgcgac
cacatattttgcaaattttgtatgctgaaacttcttaaccagaagaaagggccttcacaa
tgtcctttgtgtaagaatgagattaccaaaaggagcctgcagagaagtacaaggtttggt
cagcttgttgaagagctgctgaaaaccattgatgctttcgagcttgacaccggcgtgcag
tttgtaaatggttttggtttttcaaaaaagaaaaataattcttttgagcatttgaatgag
gaggcgtctatcatccagagtgtgggctaccgaaaccgtgtcaaaagacttggacagatt
gaatctggaaatgccgccgcgaaggacagcctcagtgtccagctgtctaaccttggaatt
gtgagatcagtgaagaaagataggcagacacaacctcgaaataaatctgtctacattgaa
ttagaatctgattcttctgaagagatagtaaataaaccagataatttcagtgtgagagac
caggaattgttacagatctcccctcaaggagcaggagatgaaggcaagtttcactctgca
aaagaggatgcttgtgagttttctgggggcatcagaaacattgaacatcatcaatgcagt
gataaagatttgaaccccactgagaatcatgcaactgaaaggcatccagaaaaatgtcag
agtatttctgtttcaaacgtgcatgtggagccatgtggcccagatgctcatgccggctca
ttacagcacgagaccagcaggttattgctcactgaagacagaacaaatgcagaaaaggct
gaattctgtaataaaagcaaacagtctggcgtagccgtgagccagcagagcagatgggct
gaaagtaaagaaacacgtaatggcaggcaggaccccagcaccgaggaaagggtaggtcca
aatgctgattccctctgtgggagaaagaagtggactcatccgaaaagtctgtgccctgaa
aattctggagctgccaccgatgttccttggataacactaaatagcagcattcagaaagtt
aatgagtggttttccagaactggtgaaatgttaacttctgacagcgcatctgacaggagg
catgagtcaaatgctgacgcagctattgtggtggaagtttcaaatgaagtggatggatgt
ttcagttcttcaaagaaaacagacttagtagcccctgatccctataatacttcaaggtgt
aaaagtggaaaagacttctccaaaccagtagaggataatatcagtgataaaatctttggg
aaaacctatcagagaaggggaagccgcccttccttgagccatgtgactgaaattacaggc
atatttactactgcaccacagataacacaagagcagcccttcacaaataaattaaaacgt
aaaagaagtacatgccttcgtcctgaggactttatcaagaaagcagatttagcagttgtt
caaaggactcctgaaaatataaaccagagaactgaccaaatggaaccaagtgaccaagca
gtgagtattaccagtaactgtcaggagaacaaaacaacaggtaatagtctccagaaagag
aacaacgctcacccaatagaatcgttgagaaaggaacctgctttcacagctaaagccaaa
tgtctgagcaacagcataagtgatttggaggtagaattaaatgtccacagttcaaaagca
cctaagaaaaataggctgaggaggaagtcttctaccaagtgtgttcttccatttgaacca
gtcagtagaaatccaagcccacctcgtgctgagcttcagatcgatagttgtggtagcagt
gaagaaacaaagaaaaacaattccaaccaaatgccagccaggcacattagagagcctcaa
ctcatcgaagccagtgaaactgcagctgatgccaagaagagcgagccaaatgaacacaca
aggaagagaagcgccagcgatgctttcccagaagagaaattaatgaacaaagctggctta
ttaactagctgttcaaatcctagaagacctcagggacctgtcagtcctagccctcagaga
aaaggagtagagcaactcgaaacattccaaatgcctgacaataccaaagaactcagggat
ctggtcctggcaggagagcccagcggcaaacccactgaccggtctgaggagagcaccagc
gtgtccttggtacctgacactgactatgacactgagaacagtgtctcagtcttggaaact
aacgctgtcagaaatgcaagaacaggatccattcagtgtatgactcagtttatcgcgagt
gaaaaccccaaggaacttgttcgtggttctaacaacgctgacagtggcacagagtgcttc
aagcacccgttgagacatgagcttaaccacagtcaggagacaatagaaatggaagacagt
gaacttgatactcagtatttgcagaatacatttcaagtttccaaacgtcagtcatttgct
ttattttcaaaacctagaagtccccaaaaggacattgttcactctgtgccctcaagggaa
ctgagtccaaaggtgacttctaaaggtaaacaaatagaatgtcagggacaggaagactct
gaaatcagtcatgtacaggcagttacagccgcagcggggttccctgtgctctgtcaggga
ggtaagccagttgctgatacaacgtgtgctggggtttctaggctttgtccgtcatctcat
tacagaagtggtgcgaatgggctcagcaccacaggtaaaactggaatttcacaaaactca
cattttaaacaatcagtttctcccatcaggtcatctataaaaactaacagtagaaaacct
ctgacagagggacgattagagaaacatacatcatcaagtgaaaaggcaattggaaatgag
accattgttcaaagtacagtacactcaattagccagaataacaaaggaaatgcctgtcaa
aaagccagttcaggcagtattaatgaagtatgttccactggtgaaaacttgcaggaacaa
ctaggtagaaacagagggcctgaggtaaacaccatgcttccattagatggtacgcagcct
agtgtctgcgaactcagggttcttctaagtgataagcttcttgaaataaagaagcaggag
ggtgaggctgttggtgcagacttctctccgtgtctgttctcagatcatgaacaatctatg
cgaagtggtaagatttttcaggtttgctcagagacacctgatgacctgttggatgatgtt
gaaattcaggaaaatactagcttcggtggaggtgacatcatggagagatctgctgttttt
aatggaagtgtcctgagaagagagtccagtaggagcccgagccctgtagcccttgtgtcg
atgtctcggggtctccacagagggtctaggaaattagaatcctcagaagagagcgactcc
actgaagatgaagatctcccctgcttccaacacttactgagcagaagcaacacacatgag
cttaccagatgcagcagtgttgtgacacagcagatgtcagagaaagcagaggggacccaa
gcaccgtggaagggcagcatcagtgactgtaataatgaggtggtcttgatggaggcgtct
caggaacatcagtttagtgaggatgcaaagtactctggcagtatgttctcttcacagcac
agtgcagcccaacgttcaaccacgaacgcaaattcccaggatcccagtttcaatccacct
tccaaacaaagtggtcttcagtttgagaatgaggaagctatcctaagtgacaaggaactg
atttcagataatgaggaaatggcagcttgccaggaagaggataatgatcaagaggaggat
agtatcatcccagattcagcatctggatatgagagtgaaacaaacctttctgaagactgc
tcacagagtgatattttaacgactcagcagagggcgaccatgaaggataacctgataaag
ctccagcaggaaatggctcacttggaagctgtgctagggcagcatgggaaccagccttct
ggccactccccttccctcctagctgacccttgtgccctgggagacctgccagatctggaa
caaaacatgtcaggaacagcaatttcaacttcaaagaacattaatgagaatcctgtaagc
cagaatctgaagcgcacttgtgatgacaaattccagccacaacatctggatggtcccacc
agtggagataatgagtcagggatggaaaggccttctccttttaaatctccattgtcaggc
agtaggcgctctgcacaggggcgctctaggggtattcaaaccagagaccccccctctcaa
gaggagctccttcagcctgttgaatcagagacgtcctgtgaaccacacaacttgacaggg
gggtcctgcgtgccaaggcaagatctagacgggtccccatacctggaatctggaatcagc
cttttctctagtagagaccccgaatccgagtcccctaaagagccagcccacgtttgcacc
acaccagcttcagcctctgcactgaaaatattccacggtcaagttgctgagtctttcagg
agtccagcctctggtgctacaaggccggcattgacgtcttcaaaaagcagagtggacaaa
gaaatctccatggtggtgtcaggcttgacccccaaagaagtaatgattgtgcaaaagttt
gctgaaaaataccatctcactttaactgatgcaatcactgaggagactacgcatgtaatt
ataaaaacagacgctgagtttgtgtgtgaacggacactgaaatattttctgggcattgca
ggaggaaagtggatagttagctattcgtgggtgatccagtctatccaagaaagaaaactt
ctgaatgtgcatgaatttgaagtcaaaggagacgttgtgactggaagaaaccaccaaggt
ccaaggagatccagagaatcccgggaaaagctcttcaagggcctgcaggtctattgttgt
gagcccttcaccaacatgcccaaagatgaactggagaggatgctgcagctgtgtggggct
tccgtggtgaaagagcttccatctctcacccatgacacaggtgcttatccagttgtgatc
gtgcagccaagtgcctggacagaagacaacaactgccctgatattgggcagctgtgcaag
gcccgactggtggtgtgggactgggtgctggacagtatatccgtctaccggtgtcgggat
ctggatgcctacctggtacagaatgtcacctgtggccctgagagtagcgagccacaagac
tccaatgattaa

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