Apodemus sylvaticus (European woodmouse): 127693994
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Entry
127693994 CDS
T10613
Symbol
Rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04015
Rap1 signaling pathway
asyl04517
IgSF CAM signaling
asyl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
127693994 (Rapgef6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127693994 (Rapgef6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127693994 (Rapgef6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
cNMP_binding
RasGEF_N
PDZ_6
RA_2
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
127693994
NCBI-ProteinID:
XP_052051291
LinkDB
All DBs
Position
10:complement(70269990..70453324)
Genome browser
AA seq
1605 aa
AA seq
DB search
MNSPVDPGARQALRKKPPERTPEDLNIIYSYLHGMEILSNLREHQLRLMSTRARYERYSG
NQMLFCSETIARCWYILLSGSVLVKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTITDGVDVSNYLSLPADLTKMHLTDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEEEEI
DRTDPLQGRDLVRECLEKEPADKTDDDVEQLLEFMHQLPAFANMTMSVRRELCSVMVFEV
VEQAGAVILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGIMPTLDKQHMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLETPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKACRES
PLHFSLTGGSEKGFGVFVEGVEPGSKAAEAGLKRGDQIMEVNGQNFENITLAKALEILKN
NTHLSFTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDIEQAPQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCHA
VQEFGLTSASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELLKESQLSMLQLSTVELATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNTHL
KQFEDIVNQETFWVASEILSESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
PVARLRGTWEKLPGKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRHIIRMTSANMDPAMMFRQRSLSQGSTNSNMLD
VQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDIDTDEEKFQMMSLQWEPAYGT
LTKNLTEKRSAKSSEMSPVPLRSVGQTAKVHLHQPHRVSQVLQVPAVNLHPIRKKGQAKD
HVLGTSLPQKGLGPTEEVSGKKHTEDTISVASSLHSSPPASPQSSPRKGYTLTPSSKCDN
LSDSSHSEISSRSSIVSNGSVDSMSAAGQDERCPTHSLAVPEPTGALEKTDHPSGISDHS
QLAHGWMLSKPSFIKGVAVSSSLSSEEMSHEHVVLEAADSGRGSWTSCSSSSHDNFQSLQ
NQKSWDFLNSYRHMHLDDPIAEVEPTDCEPCACPKGYSRTCGQCKGSLEMTQRRQSWASS
SSLSDTCEPNYGTVKRRVLESAPAEVPDGLEPRGATDPAYKTVTSSTDKGLIVYCVTSPK
KGDRYREPPPTPPGYLGICLADLKEGPHPHLKPPDYSVAVQRSKMMLNSLSRLPPALPSS
HTSAWVPSKIGSQPQRHSLQPSHPKLADVADAESEADENEQVSAV
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcccgtggaccccggcgctcggcaggcactgaggaagaagccgccggagcgg
actcctgaggacttaaatattatttattcttatctccatggaatggaaatactatcaaac
ctcagggagcatcagcttaggttaatgtctacaagagcacgctatgagagatacagtggc
aatcaaatgcttttttgttcagaaactattgccagatgttggtatatcctgctttctgga
tctgtacttgtaaaagattctatggtccttcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagaaccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattttacaaagagaaattcctgctagacagtctcgacga
aggtttcggaaaattaactataaaggagagcgccaaaccataacagatggggtggatgtt
agtaactacctttcgcttccagctgatcttaccaagatgcacctcacagacaaccctcat
ccacaggtgactcatgtgtcttctagtcagtctggctgtagcattgccagtgactctggg
agcagcagtttgtccgatatctatcaggctacagagagtgaagtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaggatgaagaggaggaggaagaagagatt
gatcgaacagatccactgcagggtcgagatcttgttcgggagtgtcttgaaaaggaaccc
gcagacaaaactgatgatgacgttgaacagttacttgagttcatgcaccagctgcctgcc
tttgcaaacatgaccatgtctgtaaggagagagctctgctctgtcatggttttcgaagta
gtagagcaggctggggctgttattcttgaagatgggcaagagcttgactcatggtatgtc
attttaaatggcactgtagaaattagtcatccagatgggaaagttgaaaatctcttcatg
ggaaatagttttggaattatgcccactctggataagcagcacatgcatggagtggtcaga
accaaagtcgatgactgtcagtttgtctgcatagcccaacaggactattggagaatttta
aatcatgtggaaaaaaatacccacaaagttgaggaagagggagaaattgtcatggtacat
gagcaccgtgagctagaccggagtggaaccaggaaaggacacattgtaatcaaggcaaca
cctgagcgtctcattatgcatttgatagaagaacattctattgtggacccaacatatata
gaagatttcctattaacttataggacatttcttgaaacccctttggatgttggcatcaag
cttttggaatggtttaagattgacagcttaagggataaggtgacccggattgtactttta
tgggtaaataatcattttaatgattttgaaggtgatcctgctatgactcgatttctagaa
gaatttgaaaagaatttggaagatacaaaaatgaacggtcacctcagattattgaatatt
gcctgtgctgcaaaggctaagtggaggcaagttgtgctgcagaaggcgtgccgtgagtcc
ccgctgcacttcagccttactggaggcagtgaaaagggatttggagtctttgttgaagga
gtagagcctggtagcaaagctgctgaggcaggactgaaacggggtgatcagataatggaa
gtcaatggacaaaactttgagaatattacgcttgctaaagcccttgaaattttgaaaaat
aatactcatctttcttttactgtgaagaccaacatttttgtgttcaaagaattgctcagt
aggactgaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagt
aaccgccattcaattcaagatgtcccaggagatattgagcaggcaccccaggagaaagga
aataagaaaattaaagcaaataccgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacgatttagtatcttgcctccaaaactatttagtgatggaggcctgagtcaa
tcacaagatgacagcattgtgggaaccaggcactgtaggcacagcctggctataatgcca
attcctgggacactctcatccagcagcccagatctcttgcagcctaccactagtatgttg
gacttttccaatccttcagatattcctgatcaagttataagagttttcaaagcagatcaa
caaagttgctacattatcatcagtaaagataccacagctaaggaagtggtctgccacgct
gtgcaggagtttggtttgaccagtgcatctgacacgtactccctctgcgaggtctctgtc
actcctgagggtgtcataaagcagagaagacttccggaccagttctccaaattagctgat
agaattcaactcaatggaaggtattacctaaaaaataacatggaaacagaaacactgtgc
tctgatgaagatgcccaggaactccttaaggaaagccagctctccatgctgcagctcagc
accgtcgagcttgccacccagctatcaatgagagactttgatttatttcgcaatattgag
cctactgaatatattgatgatctttttaaattagattccaaaacaggaaatactcacttg
aaacaatttgaggatattgttaaccaagagacattctgggttgcctcagagattttaagt
gagtcaaatcagctgaaaagaatgaagattattaaacattttattaaaattgcccttcat
tgccgagaatgcaagaatttcaattccatgtttgcaataataagtggcttgaacctggca
cctgtagcacgactcagaggcacttgggaaaagttaccaggcaaatatgagaaacatctt
caagatctacaagacctttttgatccatctagaaatatggcaaaatacagaaatattctt
agtagtcaaagcatgcagcctccaattattccactcttccctgttgtcaagaaagatatg
acatttctccatgaaggaaatgactccaaagtagatggcttagttaacttcgagaagcta
agaatgattgccaaggaaatccgtcatattattcgaatgacttctgccaacatggaccct
gccatgatgttccgacagaggtcattgagtcaaggcagcacaaattctaacatgctagat
gtccagggaggtgctcacaagaaaagagcacgccgtagctcactgctgaatgccaagaaa
ctatatgaagatgcccaaatggcaaggaaagtgaaacagtatctttctagtctggacata
gacacagacgaggagaagttccagatgatgtcactacagtgggagcctgcatatggtacc
ttgacaaagaacttaactgaaaaaaggtcagccaaatcatctgagatgtctcctgtgcca
ctgaggtcagttggccaaacagcgaaagtccacttgcatcagccacacagagtgagccag
gtgcttcaggtgcccgcagttaacttgcaccccatccggaagaaaggacaagccaaagac
catgtgctgggtacaagcttacctcagaaaggtttaggaccaactgaagaagtgagtggt
aagaaacacacagaagatactatttctgtagcatcctctctgcactctagccctcctgcc
tctcctcaaagctctcctcgcaaaggttatacactcacaccatcaagtaaatgtgacaac
ttgtctgactccagccacagtgaaatctcctctcggtccagcattgtgagcaatggttct
gttgactccatgtctgcagctgggcaggatgaacgctgtcccacccacagcctagcagtt
cctgagcccacaggggcattggaaaagacagatcacccttcagggatctcagaccacagt
cagcttgctcatgggtggatgctgtcaaagccatcttttatcaagggtgtagctgtctcg
tcttctctgagcagcgaagaaatgtctcatgagcatgttgtgctggaagcagctgacagt
ggtcggggcagttggacttcatgttccagcagctcccacgacaacttccaaagccttcaa
aatcaaaaaagctgggactttctgaattcttacagacacatgcatttagatgaccctatt
gctgaagttgagcccactgactgtgagccctgtgcctgtcctaaaggctactcaagaact
tgtggccagtgcaaaggcagcctagagatgacccagcggaggcagagctgggcctcctcc
tcctcactgtctgacacatgcgagccaaactacgggacagttaagcggagggtgttggaa
agtgcaccagcagaggtacctgatggcttggagcccaggggtgccactgaccctgcttat
aaaactgtcacttccagtacagacaagggcttaattgtgtactgtgtcacctcacccaag
aaaggtgataggtatagggagccacctcccactcctccaggatatctgggaatttgttta
gcggacctaaaggaaggaccccacccgcacctaaaacctccagactatagtgtggcagta
cagagatcaaagatgatgcttaacagcctgtctagactgccgccagctcttcccagtagc
cacacctcagcctgggttccctcgaagattggatcccagcctcaaaggcatagcttgcag
ccgtcccatcccaaactagcagatgtggctgatgcagaaagcgaagcagatgaaaatgag
caggtgtcagcagtctaa
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