Apodemus sylvaticus (European woodmouse): 127694177
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Entry
127694177 CDS
T10613
Symbol
Sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04137
Mitophagy - animal
asyl04140
Autophagy - animal
asyl04217
Necroptosis
asyl04218
Cellular senescence
asyl04380
Osteoclast differentiation
asyl05014
Amyotrophic lateral sclerosis
asyl05022
Pathways of neurodegeneration - multiple diseases
asyl05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127694177 (Sqstm1)
04137 Mitophagy - animal
127694177 (Sqstm1)
09143 Cell growth and death
04217 Necroptosis
127694177 (Sqstm1)
04218 Cellular senescence
127694177 (Sqstm1)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
127694177 (Sqstm1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127694177 (Sqstm1)
05022 Pathways of neurodegeneration - multiple diseases
127694177 (Sqstm1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
127694177 (Sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127694177 (Sqstm1)
03029 Mitochondrial biogenesis [BR:
asyl03029
]
127694177 (Sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asyl04147
]
127694177 (Sqstm1)
Membrane trafficking [BR:
asyl04131
]
Autophagy
Mitophagy
Cargo receptors
127694177 (Sqstm1)
Pexophagy
127694177 (Sqstm1)
Aggrephagy
127694177 (Sqstm1)
Xenophagy
127694177 (Sqstm1)
ER-phagy
ER-phagy recepters
127694177 (Sqstm1)
Other autophagy associated proteins
Midbophagy
127694177 (Sqstm1)
Mitochondrial biogenesis [BR:
asyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
127694177 (Sqstm1)
Exosome [BR:
asyl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127694177 (Sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
PB1
ZZ
Motif
Other DBs
NCBI-GeneID:
127694177
NCBI-ProteinID:
XP_052051588
LinkDB
All DBs
Position
10:74545996..74557723
Genome browser
AA seq
446 aa
AA seq
DB search
MASLTVKAYLLGKEEAAREIRRFSFSFSPEPEAEAQAAAGPGPCERLLSRVAVLFPTLRP
GGFQAHYRDEDGDLVAFSSDEELTMAMAYVKDDIFRIYIKEKKECRREHRPSCTQEASRN
MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHREHSKLIFPNPFGHLADSFS
HSRWHRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDGRPCPPSESASAPSEDPSVNFLKNV
GESVAAALSPLGIEVDIDVEHGGKRSRLTPTSQESSSTGAEEKSNTQPSSCSSQVSKPDV
AGEGPAQSLTEQMKKIALESMGQPEVVFQEQMESENCSGGDDDWTHLSSKEVDPSTGELQ
SLQMPESEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLT
RLLQTKNYDIGAALDTIQYSKHPPSL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctcacggtgaaggcctatcttctgggcaaggaggaggcggcccgcgagatc
cgccgcttcagcttcagcttcagcccggagccggaggcggaagcccaggccgcggccggt
ccggggccctgcgagaggctgctgagccgagtggctgtgctgttccccacgctgcggcct
ggcggcttccaggcgcactaccgcgatgaagatggggacttggttgcattttccagtgat
gaggagctgacaatggctatggcctatgtgaaagatgacatcttccgcatctacattaaa
gagaagaaggagtgccgacgggagcatcgcccatcatgtactcaggaggcatcccgaaac
atggtgcaccccaatgtgatttgtgatggttgcaacgggcctgtggtgggaactcgctat
aagtgcagtgtgtgcccagactacgacctgtgcagtgtctgcgaggggaagggcctgcac
agggagcacagcaagctcatctttcccaacccttttggccaccttgctgatagcttctct
catagccgctggcatcggaagctgaaacatggacactttggctggcctggctgggagatg
ggcccacccgggaactggagcccacgtcctcctcgggcaggggatggtcgcccttgcccc
ccatctgagtcagcttctgctccatcagaggatcccagtgtcaatttcctgaagaatgtg
ggggagagtgtggcagctgccctcagccctctcggcattgaggttgacattgatgtggaa
catggagggaagagaagccgcctgacacccacctcccaagaaagttctagcacaggcgca
gaagagaagagtaacactcagccaagcagctgctcttcgcaagtcagcaaacctgacgtg
gccggggagggccctgctcagtctctgacagagcaaatgaaaaagatagccttggagtcg
atgggacagccagaggttgtgttccaggaacagatggagtcggaaaactgctcaggagga
gatgatgactggacacacttgtcttcaaaagaagtggacccatccacaggtgaactccag
tctctacagatgccagaatcggaagggccaagctctctagacccctcacaggaaggaccc
acagggctgaaggaagctgccctgtacccacatctcccaccagaggctgatccccggctg
attgagtcactctcccagatgctgtccatgggtttctcggatgaaggcggttggctcacc
aggctcctgcagaccaagaattatgacatcggggctgctctggacacgatccagtattca
aagcaccctccatcattgtga
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