Apodemus sylvaticus (European woodmouse): 127694397
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Entry
127694397 CDS
T10613
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127694397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127694397
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
asyl04054
]
127694397
Membrane trafficking [BR:
asyl04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
127694397
Pattern recognition receptors [BR:
asyl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127694397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
AAA_22
nSTAND3
LRR_1
AAA_30
AAA_14
AAA_18
Zeta_toxin
LRR_4
Motif
Other DBs
NCBI-GeneID:
127694397
NCBI-ProteinID:
XP_052051898
LinkDB
All DBs
Position
10:53195323..53253463
Genome browser
AA seq
1140 aa
AA seq
DB search
MYILLLKLFLFHLGKFPEVFMKKSGATLHPVQSLKEENLLQDFTNLLLFQKLCPRGSENL
VRKSWHPCVPEEGGHVIEIQDLFYPNLETQKEPQLVIIEGAAGIGKSTLARQVRRAWEEG
QLYRDCFQHVFFFSCRELAQYKQLSLAELIEQGQEVPTAPISQILSHPEKLLFILDGIDE
PAWVLAEQNSELCLHWSQAQPVHTLLGSLLGKSILPEASFLLTARTTPLQKLIPSLEQPC
WVKVLGFTEFERKNYFYKYFAKERDAITAFRLVESYPVLLTLCEVPWVCWLVCICLKRQL
EQRRDLSLTSQTTTALCLKYLSLTIPGQHLGTHLRALCSMAAEGICQRRTLFSESDLCKQ
GLSKDAIDTFLKVGVLQYQPSSLSYSFAHLCLQEFFTAMSYILEDSEERYGNKDNERILE
TLIEHYGKQSLFEAPTVRFLFGLLSKKGWKEMKKFFYCNFSRKTKLKLLWHILAKTQPHQ
PPCLGLLHCLYENQEVELLTHVLHDLQGTIVPGTNEKAHTVFQTNTNHLVIQTDMDLMVV
TFCIRFCCHVKSLQLNIERQQGHELTATRMVLFRQTPITDASWKIFFCILEFTINLEELD
LSGNPLSYSAVHSLCMALEHPSCQLKTLWLVDCGLTSTHCSLLALLVSPHSSLTELDLQL
NDLGDYGVKLLCAGLKNHVWNLCILRLDLSSLSDQVITELRTLESENPKLHISSAWKPRS
TKWMDKEEVGDIPTSFKKQRQQSGDKPMESLRTKINFWGPTGPVATEVVDRERNMYRVQL
PMAGSYHCRSTGLHFVVTRTVMIEIEFCVWSQYLEKTPFQQSLMVAGPLFDIKAEQGAVT
AVYLPHFVSLQEKTVDISLFRVAHFQEHGMVLETPARVEQHYAVLENPSFSPMGILLRLI
PAVGHFIPINSITLIYYHLYLEDVTFHLYLIPNDCTIRKAIDDEEMKFQFLRINKPPPVD
ALYVGSRYIVSGSKKVEIIPKELELCYRSPGESQLFSEICVGHIGSGIKLQLRDKKNMNL
IWEALLKPGDIRPALPRIASAPTAAPSLLHFMDQHREQLVARVTSVDPLLDKLHGLVLSE
DSYEAVRAETTNQDKMRKLFSLSRSWSQACKDQFYQALKETHPHLVMDLFEKSGGVSLGS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtatatacttctgctcaaactttttctctttcatttaggaaagtttccagaagtattc
atgaaaaaatcaggagcaactcttcatcctgtacagtcattgaaagaggagaatttgtta
caagatttcacaaacctactactcttccaaaaattgtgcccaagaggctcagagaacttg
gtcaggaaaagctggcatccatgtgtaccagaagaaggaggacatgtgattgagatccaa
gacttattttacccaaacttagagacacagaaagagcctcagttagtcataatagagggg
gctgctgggattgggaagtcaacactagccaggcaggtgaggagagcctgggaggaaggc
cagctctacagggattgcttccagcatgttttcttcttcagttgcagagagttggcccag
tacaagcagctgagtctggctgagctcatagaacaaggccaggaagtacccacagctccc
atcagtcagatcctgtctcatcctgagaagctgctcttcatcctggatggcatagatgag
ccagcatgggtcttggcagagcagaattctgagctctgtctgcattggagtcaagcacag
cctgtgcacacactgctgggcagtttgctggggaaatcaatccttcctgaggcttccttc
ctgcttacagctaggaccacacctctacagaagctcattccttccttggagcagccatgt
tgggtgaaagtcctaggattcactgagtttgaacggaaaaactatttctacaaatatttt
gcaaaggaaagagatgccattactgcttttagattggttgaatcttacccagtgctcttg
accctgtgtgaggttccctgggtgtgctggttagtctgcatttgcctcaaaagacagctg
gagcagaggagagacctctcactgacctcacagaccaccacagccctctgcctgaaatac
ctttccctgacaatcccaggtcagcacctggggacccatctcagagctctctgctcaatg
gctgctgaagggatctgccaaagaaggacactgttcagtgaaagcgacctctgcaagcaa
gggttatcaaaggatgccattgacactttcctgaaggtgggtgtccttcaatatcagccc
agctctctgagctacagctttgcccatttgtgtctccaggagttcttcacagccatgtcc
tacatcttggaggatagtgaggaaagatatggtaataaggacaatgaaagaattctggaa
acactgattgaacattatggaaaacaaagcctgtttgaggcacccactgtgcgctttttg
tttggccttttgagtaaaaagggatggaaagaaatgaaaaagttcttttactgcaacttt
tctaggaagacaaagttgaagctgctatggcacatcctagcaaaaacccaaccccatcaa
ccaccttgtctgggtttgctccactgtctgtatgaaaatcaggaagtggaactcctgaca
cacgtgttgcatgatcttcaaggaacaatagtgcctggcacaaatgaaaaggcacacaca
gtgttccagacaaacacgaatcacctggtgatacagacagacatggatctcatggtggtg
actttttgcattaggttctgctgtcatgtgaagagtcttcagctgaatatagaaagacag
caaggacatgagttgacagccacaaggatggttctgttcagacagaccccaatcacagat
gccagttggaagattttcttctgcattcttgaattcacaataaacctggaggagctggac
ctaagtggaaatccattgagttactctgcagtacacagtctttgtatggctctggaacat
cctagctgccaactaaagaccttgtggcttgttgactgtggcctcacatccacacactgc
tcactcctggctttactggtcagtccccactcaagcctgactgagctagacctgcagctg
aatgacctgggtgactacggtgtgaagctgctgtgtgcagggctcaagaatcatgtctgg
aacctctgcatcctgcggctggacctgtcctctctcagtgaccaggtgattacagagctc
aggaccctggagtcagagaatccaaagttgcacatctccagtgcttggaagccacgtagt
actaagtggatggataaagaagaagttggtgacattccaacctcattcaagaagcagaga
caacagtcaggagacaaacccatggaatctctgagaactaagattaacttctggggccct
acaggacctgtggctactgaggtggttgacagagagaggaacatgtaccgagtgcaattg
cccatggctggttcctaccactgtcgcagcacaggactccactttgtggtgacaaggaca
gtgatgatcgagattgaattctgtgtctggagccaatacctggagaagactccctttcaa
cagagtctcatggtggctggacctctgtttgacatcaaggctgagcaaggagctgtgact
gcagtctacctccctcattttgtgtccctccaagagaaaacagtggacatctccttgttc
cgtgttgcccactttcaagaacatgggatggtcctagaaacgccagccagggtggaacag
cattatgcagtactggaaaacccaagcttctccccaatgggaattcttctgagactgatt
cctgctgtcggacacttcatccccatcaactccatcacactgatctactatcacctctat
ctcgaagatgtcacctttcacctgtacctgatccccaatgactgcactattcggaaggct
attgatgatgaagaaatgaagtttcagtttttgcgcataaacaagcctcccccagtagac
gctctttatgttggttcccgctatatcgtgtctggctcaaaaaaggtggaaattatccca
aaggaactggagctgtgctaccgaagtcctggcgaatcccagctcttctctgagatctgc
gttggacacattgggtcagggattaagctgcaactcagagacaagaagaacatgaatctc
atatgggaggccttgctgaaaccaggagacataagacctgctctgcccaggattgcttca
gcccccacagctgctccttccttgctacacttcatggaccagcatcgggagcagctggtg
gcccgagtgacatcagtggaccctctgttggacaagctgcatggtctggtgctgagtgaa
gattcctatgaggcagtgcgggctgagaccacaaaccaagacaagatgaggaagctcttc
agcctcagccggtcctggagtcaagcctgcaaagaccaattctaccaagctctgaaggag
acccatcctcacctcgtcatggacctctttgaaaagtcaggcggggtctctttgggatcc
tga
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integrated database retrieval system
