Apodemus sylvaticus (European woodmouse): 127694892
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Entry
127694892 CDS
T10613
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127694892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127694892
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
asyl04054
]
127694892
Membrane trafficking [BR:
asyl04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
127694892
Pattern recognition receptors [BR:
asyl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127694892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
CARD
NLRC4_HD2
NOD2_WH
LRR_6
AAA_16
NB-ARC
NPHP3_N
nSTAND3
AAA_22
AAA_14
AAA_30
AAA_18
LRR_1
Motif
Other DBs
NCBI-GeneID:
127694892
NCBI-ProteinID:
XP_052052605
LinkDB
All DBs
Position
10:53317976..53368130
Genome browser
AA seq
1259 aa
AA seq
DB search
MSGRDKTPLISSVQQQKYALKQSEHKLLKEEGYLLSDGSITIEEYQCTQESKTKVVQHEG
QQDLCYTFKINKHMAVNLVKHRPKPDKHKMLGAIPEVYIKQVEETFYHTQSFKRENLFQN
FTSLLLFEKLCQRDSENLVRKSQHPCGPEEEGHMIEIQDLFGPNIGTQKEPQLVIIEGAA
GIGKSTLARQVRRAWKEGQLYRDRFEHVFFFSCRELAQHKQLSLAELIAQGQEVPTAPIS
QILSHPEKLLFILDGIDEPAWVLMDQNPELCLHWSQTQPVHTLLGSLLGKSILPVASFLL
TARDTALQKIIPSLGQPRRVKVLGFSEFKRKEYFYKYFAERDAIRAFSLVQSKPVLLTLC
EVPWVCWLVCTCLKMQMEQGRNLSLTSQTTTALCLKYLSLTIPSQLMRTHLKALCSLAAE
GICQRKALFSESDLCKQRLTKNAIDTFLKIGVLQKQPSSLSYSFAHLCLQEFFAAICYLL
ENGKKSHGDKENIRILKTLKEVYGRHTLCEAPTVRFLFGLLNKQRKREAFARELSCKTTL
ELLWSIIGDPPYQLHHLGLLHCLYESQEEQLLTQVMHNFHLTVPDPNSMEATVSQSNMNH
LVVQTDMELMVVTFCIKFCCHVRSLQLNRKRQQGHELTAHRMVLCRWTPITDASWKIFFC
KLKLTRNLEELDISGNPLSYSVVHSLCKALRHPVFQLKALWLVDCGLTSRYCSLLASVLS
ARSSLTELNLQLNDLGDDGVIVLCEGLRNRACNLKILRLDLSSLSDQVITELRALKAENP
KLHIYSIWEPHMMVPSTNMDKEVSDNPALLKQQRQQSGDKHMELLGTDDDFWGPTGPVAT
EVVDIERNLYRVQLPVAGSYHCPSTGLHFVVTRAVTIEIEFCAWSQYLEKTPFQQSLMVA
GPLFDIKAEQGAVTTVYLPHFVSLQGNQEETVDTSLFRVAHFQEHGMVLEMPARVEQHYA
VLENPSFSPMGVLLRLIPAVGHFIPITSITLIYYHLYLEDVTFHLYLVPNDCTIRKAIDD
EEMKFQFVRINKPPPVDALYVGSRYIVSGTKTVEIIPKELELCYRSPGESQLFSEICVGH
MDSEIKLQLRDKRHMNLIWEALLKPGDLRPTLPRIAPAPKGRRRARSAEEKSSYRKRARS
GQPVRDPQGAFLCSVPSSSSPLNAPSLLHFMDEHREQLVARVTSVDPLLDKLHSQVLSED
SYEAVRAETTNQDKMRKLFSLSRSWSQACKDQFYQALKETHPHLIMDLLEKSGGVSSGS
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagagataaaactccgctgatctccagtgtgcaacaacagaagtacgccttg
aagcaatcagagcacaaacttctcaaagaagaaggttatcttctatctgatggctctatc
accatagaagaatatcaatgcacgcaggaaagtaagacaaaggtggttcagcatgagggt
caacaggacttgtgctacaccttcaaaataaataaacatatggcagtaaatctggtgaag
cacagacccaagccagataagcacaagatgctaggggccattccagaagtatatataaag
caagtagaagagactttttaccacacacagtcatttaaaagggagaatttgttccaaaac
ttcacaagcctactactctttgaaaaattgtgccaaagagactcagagaacttggtcaga
aaaagccagcatccatgtggaccagaggaagaaggacatatgattgagatccaagactta
tttggcccaaacataggtactcagaaagagcctcaattagtcataatagagggggctgct
gggattgggaagtcaacactggccaggcaggtgaggagagcctggaaggaaggccagctc
tacagggatcgctttgagcatgtcttcttcttcagctgcagagagttggcccagcacaaa
cagctgagtctggctgagctcatagcacaaggccaggaagtgcccactgctcccatcagt
cagatcctgtctcaccctgagaagctgctcttcatcctggatggcatagatgagccagca
tgggtcttgatggaccagaatcctgagctatgtctgcactggagtcaaacccagcctgtg
cacacactgctgggcagtttgcttgggaaatccattcttcctgtggcctccttcctgctc
acagctcgggacacagctctacagaagattattccttccttgggtcagccacgtcgggtg
aaagtcctgggcttctctgaatttaaacggaaggaatacttctacaaatattttgcagaa
agagatgcaattagagcttttagtttggttcagtcaaagccagtgctcctgaccctgtgt
gaggttccctgggtgtgctggctggtctgcacttgcctgaaaatgcagatggagcagggt
agaaacctctcactaacctcacagaccaccacagccctctgcctgaaatacctttccctg
acaattcccagtcagctcatgaggacccatctcaaagccctttgctcactggctgctgag
gggatctgccaaagaaaggccctgttcagtgaaagcgacctctgtaagcaaaggttaaca
aagaatgccattgacactttcctgaagatcggtgtccttcaaaagcagcccagctctctg
agctacagctttgcccacttgtgtctccaggagttctttgctgcaatctgttacctcttg
gagaatgggaagaaaagtcatggtgataaggaaaacattagaattttgaaaacactgaaa
gaagtgtatgggagacatacactatgtgaggcacccactgtgcgctttctatttggtctt
ttgaataaacagagaaagagagaagcctttgcccgagagctgtcttgtaagacaacattg
gagcttctatggagcatcataggggacccaccctatcaactacaccatctgggtttgctc
cactgtctatatgagagtcaggaagagcagctcctgacacaggtgatgcataattttcac
ttaacagtgcctgacccaaactccatggaagccacagtgtcccagtcaaatatgaatcac
ctggtggtacagacagacatggagctcatggtggtcactttctgcattaagttctgctgt
catgtgaggagtcttcagctgaataggaaaaggcagcagggacatgagttgacagcccac
aggatggttctgtgcaggtggaccccaatcacggatgccagttggaagattttcttctgt
aaacttaaactcaccagaaacctggaggaactggacatcagtggaaatccactgagctac
tctgtagtacacagtctttgtaaggccctgagacaccctgtcttccaactaaaggccttg
tggcttgttgactgtggcctcacatccagatactgctcactcctggcctcagtgctcagt
gcccgctccagcctgactgagctaaacctgcagctgaatgacctgggtgacgatggtgtg
atagtgctgtgtgaggggctcaggaatagagcctgcaacctcaaaatcctacggttggac
ctgtcctctctcagtgaccaggtgattacagagctcagggccctgaaggcagagaatcca
aagctgcacatctacagcatatgggagccacatatgatggtcccttctacaaacatggat
aaagaagtgagtgataacccagccttactgaagcagcagagacagcagtcaggagacaaa
cacatggaacttctggggactgatgatgacttctggggccctacaggacctgtggctact
gaggtggttgacatagagaggaacctgtaccgagtgcagttgcccgtggctggttcctac
cactgtcccagcacaggactccactttgtggtgacaagagcagtgacaatcgagattgaa
ttctgtgcctggagccaatacctggagaagactccctttcaacagagtctcatggtggct
ggacctctgtttgacatcaaggctgagcaaggagctgtgactacagtctacctccctcat
tttgtgtcactccaaggtaaccaagaggaaacagtggacacctccttgttccgtgttgcc
cactttcaagaacatgggatggtcctagaaatgccagccagggtggaacagcattatgca
gtactggaaaacccaagcttctccccaatgggagttctactgagactgattcctgctgtt
ggacacttcatccccatcacctccatcacactgatctactatcacctctatctcgaggac
gtcacctttcacctttacctggtccccaatgactgcactattcggaaggccattgatgat
gaagaaatgaagtttcaatttgtgcgcataaacaagccaccaccagtagatgctctttat
gttggttcccgctatattgtgtctggcaccaaaacggtggaaattatccctaaggaactg
gagctgtgctaccgaagtcctggggaatcccagctcttctctgagatctgcgttggacac
atggattcagagattaagctgcaactcagagacaagaggcacatgaatctcatatgggag
gccttgctgaaaccaggagacctcagacccacactgcccaggattgctccagcccccaaa
ggaagaaggagagccaggagtgcagaagaaaagagcagttacaggaagagagcaagaagt
gggcagccagtcagagacccccaaggagcatttctttgctcagtgccttcctcatcttca
cccttaaatgctccttccttgctacacttcatggacgagcatcgggagcagctggtggcc
cgagtgacatcagtggaccctctcttggacaagctgcatagtcaggtgctgagtgaagat
tcctatgaggcagtacgggctgagaccacaaaccaagacaagatgaggaagctcttcagc
ctcagccggtcctggagtcaagcctgcaaagaccaattctaccaagctctgaaggagacc
catcctcacctcatcatggacctccttgaaaagtcgggcggggtctcttcgggatcctga
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integrated database retrieval system
