Apodemus sylvaticus (European woodmouse): 127694893
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Entry
127694893 CDS
T10613
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127694893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127694893
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
asyl04054
]
127694893
Membrane trafficking [BR:
asyl04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
127694893
Pattern recognition receptors [BR:
asyl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127694893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
nSTAND3
AAA_14
AAA_22
AAA_18
Zeta_toxin
AAA_30
AAA_33
AAA
AAA_28
AAA_5
KTI12
Motif
Other DBs
NCBI-GeneID:
127694893
NCBI-ProteinID:
XP_052052606
LinkDB
All DBs
Position
10:53270154..53312607
Genome browser
AA seq
1223 aa
AA seq
DB search
MGESQSKQKSNKKVAWYGGLQDVDLTFETKDQMEKDLLKHRAQRSFLRLFRWPRISDDVC
LSHHIYGKGQTSHHKSRRHYRLSKREREELESERSECIRKEVIREIYEKQEKSIKEKYLF
QNVTKLLLLQKMCPRGSENLVRKSWHPCVPEEGGHVIEIQDLFGPNIGTQEEPQLVIIEG
APGIGKSTLARQVRRAWKEGQLYRDRFEHVIFFSCRELAQCKQLSLDEFIEQGQEVPTAS
ISQILSHPEKLLIILDGIDEPAWVLVEQNPELCLHWSPKQPVHTLLGSLLGKSILPEASF
LLTARTTALRKLIPSLEQSLQVEVLGFSECERKDYFYKYFAEEDDALIAFSLVQSNPVLL
TLCEVPWVCWLVCTCLEKQMDEDDNEVLSLTSQTTTDLCLKYISLIIPGQHLGTQLRALC
SLAAEGICQRRTLFSKRDLRKQKLANVAIDTFVEIGVLQKQPISLSYSFAHLCLQEFFAA
MSYILEGSKERHGNMKINRIVETLVEVYGRHTLCEAPTVHFLFGLLNEQGIREMETIFAC
KLPWKTTLKLLWSIIGDPPYQLHHLGLLHCLYESQEEQLLTQVMHNFHLTVPGPNSMEAT
VSQSNMNHLVVQTDMELMVVTFCIKFCCHVRSLQLNRKRQQGHELTAHRMVLYRWTPITD
ASWKIFFSNLEFTRNLEELDLSGNPLSYSAVRSLCMTLEEPGCQLKTLWLVNCGLTSRYC
SLLASVLSARSSLTELDLQLNDLGDDGVMVLCERLRKHACNLRILRLDQASLSDQVITEL
RALEAKNPLMSITSTWIPHMMGPTENTDGEDSLASFKQQQQHSEDKHVEPLGTDDDFWGP
TGPVATAAVDRKRNVYRVQLPVAGSYHCPSTGLHFVVTKAVTIEIEFCAWSQYLDKTPLQ
HSHMLAGPLFDIKAEQGAVTAVYLPHFVSLKGNQEETVDISLFRVAHFQEHGMVLETPAR
VEQHYAVLENPSFSPMGILLRLIPAVGHFIPITSITLIYYHLYLEDVTFHLYLVPNDCTI
RKAIDDEEMKFQFVRINKPPPVDALYVGSRYIVSGSKKLEIIPKELELCYRSPGESQLFS
EIYVEQMESEIKLQIRDKRHMNLIWEALLKPGDLRLALPRIPSVPKDAPSLLHFMDQHRE
QLVARVTSVDPLLDKLHGLVLSEDSYEAVRAETTNQDKMRKLFSLSRSWSQACKDQFYQA
LKETHPHLVMDLFEKSGGVSLGS
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatctcagtccaagcagaagagtaacaaaaaggtggcttggtatggaggtcta
caggatgtggacctcactttcgaaacaaaagatcagatggagaaggatctgttgaagcac
agagcccaacggtctttcctaagacttttcagatggccaagaatatccgatgatgtttgc
cttagtcatcacatctatggaaaagggcagacctctcatcataagtcacggagacactat
cgtctgtcaaagagggaacgtgaggaattggaatctgaaaggtctgaatgtataagaaaa
gaggtcattcgagaaatatatgagaagcaagaaaagtccattaaagaaaagtatttgttc
caaaatgtcacaaagctactactcctacaaaaaatgtgcccaagaggctcagaaaacctg
gtcaggaaaagttggcatccatgtgtaccagaggaaggaggacatgtgattgagatccaa
gacttatttggcccaaacataggtactcaggaagagcctcaattagtcataatagagggg
gctcctgggattgggaagtcaacactcgccagacaggtgaggagagcctggaaggaaggc
cagctctacagggatcgcttcgagcatgtcatcttcttcagctgcagagagttggcccag
tgcaagcagctgagtctggatgagttcatagaacaaggccaggaagtgcccacagcttcc
atcagtcagatcctgtctcaccctgagaagctgctcatcatcctggatggcatagatgag
ccagcatgggtcttggtggaacagaatcctgagctatgtctgcactggagtccaaaacag
cctgtgcacacactgctgggcagtttgctggggaaatccatccttcctgaggcttccttc
ctgctcacagctcggacaacagctctacggaagcttattccttctttggagcagtcactt
caggtggaagtactagggttctctgagtgtgaacggaaggactatttctacaaatacttt
gcagaagaagatgatgcacttatagcttttagtttggttcagtcaaacccagtgctcctg
accctgtgtgaggttccctgggtgtgctggttggtctgcacatgcctggaaaaacagatg
gatgaggatgataatgaagtcctctcactgacctcacagaccaccacagatctttgcctg
aaatacatttccttgataatcccaggtcagcacctggggacccagctcagagccctttgc
tcactggctgctgaggggatctgccaaagaaggactctattcagtaaaagagacctacgt
aagcaaaagttagcaaacgttgccattgacaccttcgtggagatcggtgtccttcaaaag
cagcccatctctctgagctacagctttgcccacttgtgtctccaggagttctttgcagcc
atgtcctacatcttggagggtagtaaagaaagacatggtaatatgaaaatcaacagaatt
gtggaaacgctggtagaagtatatgggagacataccctgtgtgaggcacccactgtgcac
tttctatttggtcttttgaatgaacagggaataagagaaatggaaacaatctttgcctgc
aagctgccttggaagacaacattgaagctgctatggagcatcataggggacccaccctat
caactacaccatctgggtttgctccactgtctgtatgagagtcaggaagagcagctcctg
acacaggtgatgcataattttcacttaacagtgcctggcccaaactccatggaagccaca
gtgtcccagtcaaatatgaatcacctggtggtacagacagacatggagctcatggtggtc
actttctgcattaagttctgctgtcatgtgaggagtcttcagctgaataggaaaaggcag
cagggacatgagttgacggcccacaggatggttctgtacagatggaccccaatcacagat
gccagttggaagattttcttctccaatcttgaattcacaagaaacctggaggagctggac
ctaagtggaaatccattgagctactctgcagtacgcagtctttgtatgactctggaagag
cctggctgccaactgaagaccttgtggcttgttaactgtggcctcacatccagatactgc
tcactcctggcctcagtgctcagtgcccgctccagcctgactgaactagacctgcagctg
aatgacctgggtgatgatggtgtgatggtgttgtgtgagcggcttaggaaacatgcctgc
aacctccgcatccttcggctggatcaggcctctctcagtgaccaggtgattacagagctc
agggccctggaggcaaagaatccactgatgtccatcaccagcacatggataccacacatg
atgggccccactgagaacacggatggagaagatagcctggcctcattcaagcagcagcag
caacactcggaagacaaacacgtggaacctctggggactgatgatgacttctggggccct
acaggacctgtggctactgcggctgttgacagaaagaggaacgtgtaccgagtgcaatta
cccgtggctggttcctatcactgtcccagcactggacttcactttgtggtgacaaaggca
gtgacaattgaaattgaattctgtgcctggagccaatacctggacaagactcccttgcaa
cacagtcacatgttggctggacctctgtttgacatcaaggctgagcaaggagctgtgact
gcagtctacctccctcattttgtgtcactcaaaggcaaccaagaggaaacagtggacatc
tccttgttccgtgttgcccactttcaagaacatgggatggtcctagaaacgccagccagg
gtggaacagcattatgcagtactggaaaacccaagcttctccccaatgggaattcttctg
agactgattcctgctgtcggacacttcatccccatcacctccatcacgctgatctactat
cacctctatctcgaggacgtcacctttcacctttacctggtccccaatgactgcactatt
cggaaggctattgatgatgaagaaatgaagtttcagtttgtgcgcataaacaagccaccc
ccagtagatgctctttatgttggttcccgctatattgtgtctggctccaaaaagctggaa
attatcccaaaggaactggagctgtgctaccgaagccccggggagtcccagctcttctct
gagatctatgttgaacaaatggagtcagagattaagctgcaaatcagagacaagaggcac
atgaatctcatatgggaggccttgctgaaaccaggggacctcagacttgctctgcccagg
attccttcagtccccaaagatgctccttccttgctacacttcatggaccagcatcgggag
cagctggtggcccgagtgacatcagtggaccctctcttggacaagctgcatggtctggtg
ctaagtgaagattcctatgaggcagtgcgggctgagaccacaaaccaagacaagatgagg
aagctcttcagcctcagccggtcctggagtcaagcctgcaaagaccaattctaccaagct
ctgaaggagacccatcctcacctcgtcatggacctctttgaaaagtcaggcggggtctct
ttgggatcctga
DBGET
integrated database retrieval system
