Apodemus sylvaticus (European woodmouse): 127694894
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Entry
127694894 CDS
T10613
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127694894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asyl04131
]
127694894
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
asyl04054
]
127694894
Membrane trafficking [BR:
asyl04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
127694894
Pattern recognition receptors [BR:
asyl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127694894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
NB-ARC
AAA_16
NPHP3_N
nSTAND3
AAA_22
AAA_30
AAA_18
Motif
Other DBs
NCBI-GeneID:
127694894
NCBI-ProteinID:
XP_052052608
LinkDB
All DBs
Position
10:53318060..53437004
Genome browser
AA seq
1191 aa
AA seq
DB search
MGKSQSKQKSDTKVAQYDDPEVLYTKFVMQKHTEVKQMRHRPRPKRDSLLETFLELSMKE
VEEALYSVQSLKEENLFQNFTRLLLFQKLCPRGSENLDRKSWHPCVPEEGGHVIEIQDLF
GPNLDIQKKPQLVIIEGAAGIGKSTLARQVKRAWTKGELYGYRFWCVFFFSCRELAQHKQ
LSLTELIAQGQEIPTARIKQILSHPEKLLFILDGIDEPAWVLEKQNPELCLDWSQTQPVN
TLLGSLLGKSILPGASFLLTARTTDLQKLIPSLEQPCWVEVLGFTEFERENYFHQYFANT
TDAVTAFRFVKSNPVLLTLCEVPWVCWLVCTCLKRKAVQRRDLSLTSQTTTTLFLKYISQ
TISGQHLKTQLRALCKLAAEGICQRSTLFSKRDLCKQGLAEDAIDTFLKIGVLQKKPSSL
SYSFVHLYLQEFFAAISYILEDSEERHGNKDNERIVETLIEHYGKQNLFEAPTMRFLFGL
LSKKGWKKVKKYFYSNFSRKTKLKLLWHILAKTQPHQPPCLGLLYCLYENQEKELLTHVM
HNFQGTIVPGPDDKAHTVLQTNMNHLVIQTDMDLMVVTFCIRFCSHVRSLRVNMGRQQGY
ALTAPSMVLYKRTPITNTNWNIFFSNLKFTRNLVNLDLSGNLLSYSAVQSLCTTLRHPNC
QLMTLWLVDCGLTSTYCSLLASVLSARSSLTELNLQLNDLGDDGVMVLCEGLRNRACNLL
ILWLDKASLSDQVTTELRTLEAKNPKLFIVSIREPHMMVPSTNMDKEVSDSPALLKQQRQ
QSGDKHMEPLGTDDDFWGPTGPVATEVVDIERNLYRVQLPKAGSYHCPSTGLHFVVTRAV
TIEIEFCAWSQYLEKTPLQQSLMVAGPLFDIKAEQGTVTAVYLPHFVSLKGNQEETVDIS
LFRVAHFQEHGMVLETPARVEQHYAVLENPSFSPVGILLRLIPAVGHFIPITSITLIYYH
LYLEDVTFHLYLVPNDCTIRKAIDEEEMTFQFVRINKPPPVDALYVGSRYVVSGSETVEI
IPKELELCYRSPGESQLFSEIYVGHMDSEIKLQIRDKRHMNLIWEALLKPGDLRPTLPRI
APAPKAAPSLLHFTDQHREQLVARVTSVDPLLDKLHSQVLSEDSYEAVRAETTNQDKMRK
LFSLSRSWNWDCKDQFYQALKETHPHLVMDLLEKSGYPRRMWLPLSWARAL
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatctcagtccaagcagaaaagtgacacaaaggtggctcagtatgatgatcca
gaggtcctgtacactaaattcgtaatgcagaaacatactgaggtgaagcagatgaggcac
agacccaggccaaagagggactctttgctagaaacatttctagaattatctatgaaggaa
gtagaagaggctctttactctgtacagtcattgaaagaggagaatttgttccaaaatttc
acaaggctactactcttccaaaaattgtgcccaagaggctcagagaacttggacaggaaa
agctggcatccatgtgtaccagaagaaggaggacatgttattgagatccaagacttattt
ggaccaaacttagatatacagaaaaagcctcagttggtcataatagagggggctgctggt
attgggaagtcaacactggccaggcaggtgaagagagcctggaccaaaggtgagctctac
gggtatcgcttctggtgtgtcttcttcttcagctgcagagagttggcccagcacaagcag
ctgagtctgactgagctcatagcacaaggccaagaaatacccacggctcgcatcaagcag
atcttgtctcaccctgagaagctgctcttcatcttggatggcatagatgagccagcatgg
gtcttggagaagcagaatccagagctatgtcttgactggagtcaaacacagcctgtgaac
acactgctgggcagtttactagggaaatctattcttcctggggcctccttcctgctcaca
gctcggaccacagatctacagaagctcattccttccttggagcagccatgttgggtggaa
gtcctaggttttactgagtttgaacgtgagaactacttccaccaatattttgcaaataca
acagatgcagttactgcttttagatttgttaaatctaacccagtgctcttgaccctctgt
gaggttccctgggtgtgctggctggtctgcacctgcctgaaaaggaaggcagtgcaaagg
agagacctttcattgacctcacagaccaccacaacactcttcctgaaatacatttcccaa
acaatttcaggtcagcacctgaagacccaactcagagccctctgcaaactggctgctgag
gggatctgccaaagaagtaccctgttcagtaaaagagacctctgtaagcaagggttagca
gaggatgccattgacactttcctgaagattggtgtccttcaaaagaagcccagctctttg
agctacagctttgtccatttgtatctccaggagttctttgcagccatatcctacattttg
gaggatagtgaggaaagacatggtaataaggacaatgaaagaattgtggaaacactgata
gaacattatggaaaacaaaacctatttgaggcacccactatgcgctttttgtttggcctt
ttgagtaaaaagggatggaaaaaagtgaaaaagtacttttactccaacttttctaggaag
acaaagttgaagctgctatggcacatcctagcaaaaacccaaccccatcaaccaccttgt
ctgggtttgctctactgtctgtatgaaaatcaggaaaaggagctcctgacacacgtgatg
cataattttcaaggaacaatagtgcctggcccagatgataaggcacacacagtgttacag
acaaacatgaatcacctcgtgatacagacagacatggatctcatggtagttactttctgc
attaggttctgctctcatgtaaggagtcttcgggtgaatatgggaagacaacaaggatat
gcactgactgccccaagtatggttctatataaacggaccccgatcactaataccaattgg
aacattttcttctccaatcttaaattcacaagaaacctggtgaatctagacctaagtgga
aatctactgagctactctgcagtacaaagtctctgtacaacccttagacatcctaactgc
caactgatgaccttgtggcttgttgactgtggcctcacatccacatactgctcactcttg
gcctcagtgctcagtgcccgctccagcctgactgagctaaacctgcagctgaatgacctg
ggtgacgatggtgtgatggtgctgtgtgaggggctcaggaatcgtgcctgcaacctcctc
atcctgtggctggacaaggcctctctcagtgaccaggtgactacagagctcaggaccttg
gaggcaaagaatccaaagctgttcattgtcagcatacgggagccacatatgatggtccct
tctacaaacatggataaagaagtgagtgatagcccagccttactgaagcagcagagacag
cagtcaggagacaaacacatggaacctctggggactgatgatgacttctggggccctaca
ggacctgtggctactgaagtggttgacatagagaggaacctgtaccgagtgcagttgccc
aaggctggttcctaccactgtcccagcacaggactccactttgtggtgacaagggcagtg
acaatcgagattgaattctgtgcctggagccaatacctggagaagactcccttgcaacag
agtctcatggtggctggacctctgtttgacatcaaggctgagcaaggaactgtgactgca
gtctacctccctcattttgtgtcactcaaaggcaaccaagaggaaacagtggacatctcc
ttgttccgtgttgcccactttcaagaacatgggatggtcctagaaacgccagccagggtg
gaacagcattatgcagtactggaaaacccaagcttctccccagtgggaattcttctgaga
ctgattcctgctgttggacacttcatccccatcacttccatcacactgatctactatcac
ctctatctcgaggacgtcacctttcacctttacctggtccccaatgactgcactattcgg
aaggccattgatgaagaagaaatgacatttcagtttgtgagaataaacaagccacccccg
gtagatgctctttatgttggttcccgctatgttgtgtctggctctgaaacggtggaaatt
atccctaaggaactggagctgtgctaccgaagccccggggagtcccagctcttctctgag
atctacgttggacacatggattcagagattaagctgcaaatcagagacaagaggcacatg
aatctcatatgggaggccttgctgaaaccaggggacctcagacccacactgcccaggatt
gctccagcccccaaagctgctccttccttgctacacttcacggaccagcatcgggagcag
ctggtggcccgagtgacatcagtggaccctctgttggacaagctgcatagtcaggtgctg
agtgaagattcctatgaggcagtgcgggctgagaccacaaatcaagacaagatgaggaag
ctcttcagcctcagtcgatcctggaactgggattgcaaagaccaattttaccaagctctg
aaggagacccatcctcacctggtcatggacctccttgagaagtcagggtatcccaggaga
atgtggcttcccttgtcttgggccagggccctctga
DBGET
integrated database retrieval system
