Atopobium sp. oral taxon 416: J4859_00695
Help
Entry
J4859_00695 CDS
T07170
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
atb
Atopobium sp. oral taxon 416
Pathway
atb00300
Lysine biosynthesis
atb00550
Peptidoglycan biosynthesis
atb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J4859_00695
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J4859_00695
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
atb01011
]
J4859_00695
Enzymes [BR:
atb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
J4859_00695
Peptidoglycan biosynthesis and degradation proteins [BR:
atb01011
]
Precursor biosynthesis
Amino acid ligase
J4859_00695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QUC03523
LinkDB
All DBs
Position
complement(147700..149235)
Genome browser
AA seq
511 aa
AA seq
DB search
MNTAKTPTLADLSRLLQEKGSLSPVSEPLTAEEAALTITGADCDSRVVKPHHLFICKGAQ
FKSNYLSAAKQAGTVAYLCDEERADELKAIEPTLPALVTNQLRPAMADVSAAAFGHPDRE
LTTIGITGTKGKSTTGYMVRSVLEAGSQHPTCGLIGSVEYFDGIVQEEAVNTTPESPDLW
RHIANMRDSGLPYAVMEISSQALKYNRVDNLSLDVGAFLNIGYDHISPLEHPTWEDYFQS
KLKIFDHAQAAVVNLNSDHADRILARSHECTQVLTFSTTDSTATVSARDIQSSFGSIQFV
CTTPSWKDPIKLVMPGLFNVDNALAAIAICEYLHIPYEQVAEGLAHTKVPGRMELIPTPG
RQVMGIVDFAHNKMSFEKFFPNVKKEFPGYKVIAVFGATGDKAVERRYELPKAAAPYADK
LIYTLDDPGYEKVEDICRTMAEATPAGADYEIIPDRAHAVQRAVDLAYSCDQPTLVCLLA
RGTEGAEHIKGKLVPAPLDADLFNDAVKRHS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgcaaagacacctacactggcagacctttcccgtctgctgcaggagaagggc
tccctttctccggtcagtgagccccttactgcagaagaggcggcgctgaccatcaccgga
gccgactgtgactcccgcgtcgttaagccccaccacctctttatctgtaagggtgcacag
ttcaagagcaactatctgagcgccgccaaacaggcaggtactgtagcgtatctgtgcgat
gaggaacgcgcagacgagctcaaggcgatagagccgacgcttcccgcgctcgtcaccaac
cagctgcgtcccgcaatggcagacgtcagcgctgcggccttcggacaccctgaccgggag
ctcaccaccatcggtatcaccggcaccaaaggcaaatcgaccacaggctacatggtgcgc
tcggtgcttgaagcgggatctcagcatcccacctgcggtttaatcggctcggtcgaatac
ttcgacgggatcgtgcaggaggaagcggtcaacaccaccccggagtctccggacctctgg
cgccacatcgcaaatatgcgtgacagcggccttccctatgcggtaatggagatctcaagc
caggcgctcaaatacaaccgtgtggataacttaagtctcgatgtcggcgcgttcctcaat
attgggtatgaccacatctcccctttagagcaccccacttgggaggattacttccagagc
aaactcaagatctttgaccatgcacaggcggcggtcgtcaacctcaactcggaccatgcg
gaccgtatcctggcgcgctcccacgagtgtacgcaagtactgaccttcagcaccacggac
tcaacggcgactgtttcagcgcgcgacattcaatcctcattcggaagcatccagttcgtg
tgtaccacccccagctggaaggacccgatcaaactggtgatgcccggcctcttcaacgtc
gataacgcgcttgccgcaatcgcgatctgcgagtatctgcatatcccctatgagcaggtc
gctgaaggcctcgcccacacgaaggtccccggcaggatggagcttatccccaccccgggc
cgccaggtgatgggaatcgtcgactttgcgcacaacaagatgtcttttgagaagttcttc
cccaatgtgaagaaggaattcccgggctacaaggtgatcgcggtctttggggccactggc
gacaaagcagtcgaacggcgctacgagctgcccaaggctgcagcaccctacgcggacaaa
ctgatctacacgctcgatgacccgggttatgaaaaggtggaagacatctgtaggacaatg
gcagaggcgaccccggcaggagctgactatgagatcatccctgaccgcgcacatgcggtg
cagcgggccgtcgatctcgcctactcgtgcgaccagcccaccctcgtatgcctcttggca
cgggggactgaaggcgctgagcacatcaaaggcaaactggtacctgccccgctcgatgca
gacctcttcaacgacgctgtgaaacgccactcctaa
DBGET
integrated database retrieval system
