Aethina tumida (small hive beetle): 109606400
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Entry
109606400 CDS
T06105
Name
(RefSeq) RING-box protein 1A
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03420
Nucleotide excision repair
atd04120
Ubiquitin mediated proteolysis
atd04141
Protein processing in endoplasmic reticulum
atd04310
Wnt signaling pathway
atd04341
Hedgehog signaling pathway - fly
atd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109606400
04120 Ubiquitin mediated proteolysis
109606400
09124 Replication and repair
03420 Nucleotide excision repair
109606400
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109606400
04341 Hedgehog signaling pathway - fly
109606400
04350 TGF-beta signaling pathway
109606400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atd04121
]
109606400
03400 DNA repair and recombination proteins [BR:
atd03400
]
109606400
Enzymes [BR:
atd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
109606400
Ubiquitin system [BR:
atd04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109606400
Multi subunit type E3
SCF complex
Ring finger protein
109606400
Cul2 complex
109606400
Cul3 complex
109606400
Cul4 complex
109606400
Cul7 complex
109606400
Cul8 complex
109606400
Cul9 complex
109606400
DNA repair and recombination proteins [BR:
atd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109606400
TCR (transcription coupled repair) factors
Cul4-CSA complex
109606400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
109606400
NCBI-ProteinID:
XP_019878521
LinkDB
All DBs
Position
7:complement(join(5649004..5649102,5649153..5649274,5649328..5649355,5649413..5649502))
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AA seq
112 aa
AA seq
DB search
MASAMDVDVDEVEMPTSSSKGEKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIEC
QANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgcaatggacgtagacgttgacgaagtagagatgcccacttccagttccaag
ggcgagaaaaagcggttcgaagtgaaaaagtggaacgccgtcgctttgtgggcatgggac
attgtcgttgacaactgtgccatttgccgcaaccacatcatggatttgtgcatcgagtgc
caggcaaatcaggcctcagccaccagtgaagagtgtacagttgcctggggagtgtgcaat
catgcatttcacttccactgcatttcaagatggttaaaaactcgacaagtatgtcctttg
gacaacagagaatgggaattccaaaagtatggacattaa
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