Actinia tenebrosa (Australian red waratah sea anemone): 116302096
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Entry
116302096 CDS
T07455
Name
(RefSeq) probable E3 ubiquitin ligase complex SCF subunit sconB
KO
K10260
F-box and WD-40 domain protein 7
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116302096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aten04131
]
116302096
04121 Ubiquitin system [BR:
aten04121
]
116302096
Membrane trafficking [BR:
aten04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
116302096
Ubiquitin system [BR:
aten04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116302096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_IFT122_1st
Beta-prop_EIPR1
F-box
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_DCAF12
WD40_like
WD_LRWD1
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
WD40_RFWD3
DUF4508
PQQ_3
Ge1_WD40
DUF7219
Motif
Other DBs
NCBI-GeneID:
116302096
NCBI-ProteinID:
XP_031567155
UniProt:
A0A6P8IKB8
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAGRDSHFAGTKTLPAMKVRRTDIRKTRKAMKYKAFAKPLTLPSIELMYADLNDVSSLFS
KKQVCKKVSDWFTSWRPWQKRILLCKMTEKVSKSQLHSLITTLEPVFHRDFVLELRGSYP
TIFLKPRFVHTISSLLGDTDLRTLRQDKGESIDAGDEKTKKSLGKQDLETLRRISEEHDE
LGDCYHEIAVEKGVEYEHVSEVDDVTLPSFAVTPAATVEIRPSRRHEHAPPFLRLRKVST
RNFFPDSKIPKLGTMKSVLRPEDKKVFGKDPVSFKYSKWWEGHEGPKLLNPRRSRLARFF
KAQLNQINQWLDEWAPHERVDMLAEVVKCCDADCLNFFALCLSRRLKDQTGIDSIPDVLL
RKVFSYLDIKSLCRSSQVCRRWRFLSQESGLWRRKVRILGFNEGIVNLPMKIITLGKGHL
VDWKQAYQEVRTFYKQLESMETKEEVQETQEEVVVKKKPVQKSLDEKLIGTPSPDVVKPS
IVKEVPKERAKPPAVASGLGLIDISVVQTLKDIGPAQSPATTDQRGHQDEFETKDEDKND
LTGGNLKMLAKSLRALMRERREPEDIALDVRPTLVQALNLLDAKRTPRSKFHYISLAVQG
VLAVQRVKRLQGHMDGVLCLEFDLKRVITGSSDRTIRVWDVRSGRSIRKLKGHKGGVRCL
QFDSKKILSGSWDMTIMVWDIVKFECLRVLYGHKGCVSCLKFDEHHIVSGSHDHTIRVWD
INTWECIKVINAHDGVVMCLEFEGQYVLSGSLDKTLKLWDVETEEVLRVFTGHSDGVTSL
IVVGGLMISGSADGMLFFWDVDTGHCEAAIQAHEGSVHSICASVTGEHFLSGGGDNLIKE
WDTATCTCLRTLQGHRGAVLCVRTNPRRILSCSGDGTVRIWDLEKPNPEGQSRNISVQGN
NVDPAMVRGAK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcgatagtcacttcgcgggcaccaaaaccctccccgccatgaaagtaagg
agaacagatatacgaaaaacacgaaaggcaatgaaatacaaggcatttgctaagccattg
acactacctagtatagaattaatgtacgcggacttgaatgatgtaagtagtttgttctcg
aagaagcaagtttgtaaaaaagttagtgactggtttacgagctggaggccttggcaaaaa
cggatcttattatgtaaaatgactgaaaaagtctctaaaagtcaactacattcactcatt
acgaccttagagccagtatttcatagggattttgttcttgaactgcgtggctcgtacccc
acgatatttttaaagccaagatttgttcataccatttcgagtttacttggtgatactgat
ctgcgaactttgcgtcaagacaaaggagaatccatcgatgctggagatgaaaaaacaaag
aaatcactaggaaaacaagatttagaaactcttagaagaatctcagaagagcatgatgag
ttaggggattgttatcatgaaattgcggtcgaaaaaggtgttgaatacgaacatgtatca
gaagtggacgacgtaactctaccaagttttgctgtaactccagcagcaacggtagaaata
cgtccttcacgccgacacgaacatgcccctccatttttgagactcagaaaagtcagcact
cgaaacttttttccggacagtaaaataccgaaattaggaactatgaaaagtgtccttcgt
cctgaagacaagaaggtgtttggtaaggaccctgtatcttttaaatattccaaatggtgg
gaaggacatgagggaccaaagctcttgaatcccagacgaagtcgactggcgaggtttttt
aaggcacagttaaatcaaatcaatcagtggcttgatgaatgggctccacacgaacgagtt
gatatgctagccgaagtcgtcaagtgctgtgatgcagattgtctgaatttctttgcttta
tgtctcagtagaaggttgaaagaccaaactggtatagatagcattccagatgttctgctt
cgtaaagtcttttcttatttagatatcaagagcttatgcaggagttcacaggtgtgtcgc
cgatggaggttcctaagtcaagaaagtggcttgtggcgaagaaaagttagaattttaggc
tttaatgaaggaatagttaacctgccaatgaagataataactctcggcaagggacacctc
gtggactggaaacaggcatatcaagaagtaagaacattttacaaacagttggaaagcatg
gagacaaaagaagaagtacaggaaactcaagaagaagtagttgtcaaaaagaaacctgta
cagaaatctttggacgagaagctgatcggcactccatcaccagatgttgttaaaccatct
atcgtcaaggaagtacctaaagaaagagctaaacctcctgcagttgccagtgggcttggt
ctaatcgacattagtgttgtccagacgttgaaagatattggccccgcccagtcacctgca
acaacagaccaacgaggccaccaagatgaatttgaaaccaaagatgaagacaagaacgac
ttgactggtgggaatctgaagatgcttgcaaaaagcttgcgtgcattaatgagagagaga
cgtgaaccagaggatattgctttagatgttcgaccgacactggtgcaagctcttaatctg
ctggatgccaagcgcaccccccgctccaaattccactacatatccctagcagttcaagga
gtactagcagtgcagagagttaaaagactgcaaggtcacatggacggtgtgttgtgtctg
gagtttgatcttaagagagtgataacaggatcatctgacagaacaataagggtgtgggat
gtgagaagtggaagaagtataagaaaactcaaagggcataagggaggtgtccgttgtctt
cagtttgatagtaaaaagatactaagtggatcctgggatatgactatcatggtatgggat
attgtaaaatttgagtgtctacgagtgctatatggtcacaaggggtgtgtttcttgtctt
aagtttgatgaacatcacatagtgagtgggtcacatgaccatactatacgtgtctgggac
atcaatacatgggaatgtatcaaagttattaatgcacacgatggagtcgtgatgtgtctt
gagtttgaaggccaatatgtgctgagtggatccttagacaaaacactaaaactttgggat
gtagagactgaagaagtcttaagagtctttactggacacagtgatggtgtgacatctcta
atagtggtaggaggtcttatgatcagtggttcagcagatggtatgttgtttttctgggat
gttgatacaggccactgtgaggctgcaatccaagctcatgaaggttctgttcattctatc
tgtgcttctgtaactggagaacacttcctttctgggggaggggataacttgatcaaggaa
tgggacactgcaacatgcacttgtttacggacgttacaaggacataggggtgcggtgctg
tgtgttaggacaaatcctcgacgtattctttcgtgttctggtgatggaactgtcagaatt
tgggacctcgagaaacctaatccagagggccaatctcgaaatatctcagttcaagggaac
aatgtagatcccgcaatggtcagaggagcaaaatga
DBGET
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