Actinia tenebrosa (Australian red waratah sea anemone): 116303252
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Entry
116303252 CDS
T07455
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116303252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aten03019
]
116303252
Messenger RNA biogenesis [BR:
aten03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
116303252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
TDP-43_N
RRM_PARP14_3
Nup35_RRM_2
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
116303252
NCBI-ProteinID:
XP_031568624
UniProt:
A0A6P8IP16
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MTQYVRVTEDESCPEQAIELPLEPDGSLLLSNIQGQFPGACGLRYRSPDTQSLRAVRLAE
NVLFPPFDEGWGNLLFMVVPTKIDTASKRKIEESPTGKEPETKMTKVEGIGDLIVLGLPF
RTTEPEMKEYFGQFGEVDYCEVKCDPVSKKSRGFGFVRFVNDEDAKNVLSSSHKIQNRLC
EVRLPRPKEELNIPKKLFVGRIPDGAAEKELQEYFSQFGELTDVYIPKPNRNFGFVTFAS
GEIAKSVVSQNHRLHDSLLNVSFAEPKANSMRGAAASGYPMGMGYDMWYSGSRQGGGSGY
NANAASAYNMMSMMGQGMPGMMGSGTTNKTWSRGASPGSMARK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtacgtgcgagtcacagaagatgaaagctgtccagaacaagcgatagaactc
cccttagaaccagatggctctcttcttctttccaacatacaaggacagtttccaggagct
tgtggtctgagatatagaagtcctgatacacagtcgcttcgtgctgttcggttggcggaa
aatgtgctctttccaccatttgatgaaggatggggaaacttgctgttcatggtcgtcccg
accaaaatagacacagcaagcaagcgtaaaatagaagagtctccaactggtaaggaacca
gaaacaaaaatgaccaaagtagaaggcataggagatcttatcgtacttggcctgccgttc
cgcaccacagagcctgagatgaaagaatactttggtcagtttggagaagtggattactgt
gaggtaaaatgcgatcctgtaagcaaaaaatcaagagggtttggttttgtaagatttgta
aatgatgaagatgccaaaaatgtattatcctcttcacacaaaattcaaaatcgtctttgt
gaagtcaggcttccaagaccaaaggaagagctgaacatccctaaaaagctctttgttggc
cgtatcccagatggagcagcagagaaggaactacaagaatatttcagccagtttggagaa
ctaacagatgtctacatcccaaaaccaaacagaaattttggatttgtaaccttcgcatct
ggtgagattgccaaaagcgtagtcagccagaaccatcgtcttcatgacagtctcctcaat
gtatcatttgctgaacccaaagctaattccatgcgaggtgcagcagcctctgggtaccca
atgggcatgggctatgacatgtggtattctggtagtcggcaagggggagggagtggttat
aatgctaatgctgcatcggcttataatatgatgagcatgatgggccaggggatgccaggt
atgatgggcagtggtactaccaacaaaacatggtcaagaggggctagtcctggtagtatg
gccaggaaataa
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