Actinia tenebrosa (Australian red waratah sea anemone): 116307123
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Entry
116307123 CDS
T07455
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116307123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aten03400
]
116307123
Enzymes [BR:
aten01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
116307123
DNA repair and recombination proteins [BR:
aten03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
116307123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
116307123
NCBI-ProteinID:
XP_031573134
UniProt:
A0A6P8J0X6
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MFENETDSLYPGIRLLLPHLDKDRPAYGMKEVVLARYYIEILSIGKDSTDGRKLLNYRHP
GASKQGALGDFASVAYFVLKNRCPEKGSFNVEQINKHLDDIAQANLEKKRDEVKKSLQIL
LRNTTAMEQKWLIRIILRELKTGLSENSVLGVFHSDALELYNICNSLSKVCQDLHNPTIR
MNEVEISLFSPFRPMLGQRGSLNQVEKVMEGQPFYIEEKVDGERMQLHKGNNTYKYFSRS
ANEYTHIFGESADEGFLTPHIAESFNSSTESCILDGEMVIFDPSAGTFFTKATNHDVKSA
STYDKGFHPCFIVFDILLLNDRKLANVSLQERIAVLNTVFNPRLGYIQFVERKNGTSKTE
IISALNEAIDRREEGLVIKAPSSVYKPNVRNGSGWLKIKPEYVDSLSDELDVLIVGGYFG
VGIRSGMISHFLCAVAVPPDQKGQHPSQFYSFCKVGTGYTLDELRELGNKLKPHWQPFKT
NKPPQNIALAPGFKEKPDVWIEPSKSKIVQIKAAEIIASDRYKTGSTLRFPRLECIRDDK
HWYECLDLKELEKLRTMAEGKLTYQHTDMDGTSEPTRKKRRVAARVEQPRTVAAHFRPAD
VSSVTEVSKLFAGKEFCIINGPTSEPKAQLEKKVVEHGGTFTQNPGPETYCVIAERVNLR
VNNIIKDAKHDVVKASWLIDCLNQVKLLPWLPIHMIHRSPTTEEKFAMQYDSYGDSFTQD
ATQESLKKVFGSFENQEKATITTDEIAEIEQRYFPDQCPLGLFRGSRIYLDQFKSLDDPN
TAIKDSSLELTALQLRFYGASIISEFDEIVTHVVFDERDLTRLPELRQIMRSRQQKHHFV
TQDWVTQSIEKGQLLQERPFAPVPSV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatgagactgactctttgtatcctggtatacgattgctattaccacacctg
gataaagacagacctgcatatggaatgaaagaggttgtactggcaagatattatattgaa
atattgagtattggtaaggacagcactgatggaaggaagttattaaactatcggcaccca
ggggcttcaaaacagggggcccttggagactttgcaagtgtagcatactttgttttgaag
aacagatgcccagaaaaaggaagttttaatgtggaacaaatcaacaaacaccttgatgac
attgcacaagcaaatctagagaaaaaacgagatgaagtgaaaaagtctcttcaaattctc
ttaaggaacacaactgcaatggagcagaaatggctgatcaggataatccttagggaactt
aaaacaggcctaagtgagaactctgttcttggtgtgtttcattctgatgcactagagctt
tacaacatctgcaacagtttgtcaaaagtgtgtcaagatctccacaatccaaccataaga
atgaatgaagtcgaaatctctctattttcaccattcagacccatgttaggacaaagaggt
tctctgaatcaggttgaaaaagtcatggagggtcaacctttttacatcgaggaaaaagtt
gatggtgagcgcatgcaacttcataaagggaacaacacctacaaatacttttcgagaagt
gcaaacgagtacactcacatctttggagagagcgcagatgaaggatttctaactccacat
atcgcagaatcttttaacagctctacagaatcctgtattcttgatggtgaaatggtgatc
tttgatccaagcgcgggcacgttcttcaccaaagctacaaatcatgacgtcaaatcagcg
tctacctatgataaaggttttcatccttgcttcattgtgttcgatattttactattaaat
gatagaaagcttgcaaatgtctctctgcaagaacgaatagctgtattaaacaccgttttt
aatcctcgacttggatacattcagtttgtggagagaaaaaatggaacctcaaaaacggaa
attattagtgctttgaacgaagccattgatcgccgtgaagaaggcctggttattaaagct
cctagttcagtttacaaaccaaatgtacgaaacgggagtggctggcttaagatcaagcct
gagtacgtggacagcttgagtgacgagctcgatgtcttgatcgttggaggatattttggt
gttggaattcgcagtggaatgatttctcacttcttgtgcgctgtagccgttcctccagac
cagaaaggacagcatccatctcagttctactcattctgtaaggttggcacaggatacact
ctggatgaactacgggaactcggaaacaagctaaaacctcactggcaaccgtttaaaacc
aacaaacctccacaaaacatagcacttgcaccaggatttaaggaaaaaccagatgtgtgg
atcgaaccttccaagtctaaaatcgttcagatcaaagctgcggaaatcattgcttcggac
aggtacaaaacgggctcaacgttaaggttcccgaggctggaatgcatacgagatgacaaa
cattggtatgagtgtcttgatctcaaagaactggagaagctaagaacgatggctgaaggg
aaacttacatatcagcatactgatatggatggtacttctgagccgaccaggaagaaacgt
cgggtggcggctcgtgtagagcaaccacggactgttgcagcgcacttccgtccagcggat
gtgtcttctgtcactgaagtgtcaaagctatttgcaggtaaagaattttgtatcatcaat
ggaccaacgagtgaacccaaagctcagctcgagaaaaaagtcgtcgagcatggaggcaca
tttacacagaatccaggaccagaaacctactgtgtcattgctgaaagagtcaaccttcgt
gtcaataacatcatcaaggatgccaaacatgatgttgtcaaagcctcttggcttatagac
tgcttgaatcaagtcaaactacttccatggttacctatacacatgattcaccgctcacca
acaacggaagagaaatttgccatgcagtatgacagctatggtgacagttttacccaggac
gccacgcaagaatcgctgaaaaaggtcttcggcagttttgagaatcaggaaaaggctact
attaccactgatgaaattgctgaaatagagcaacgctattttccagatcagtgtcccctt
gggttatttagaggctcaagaatatatttggaccaattcaaatcattggatgaccctaat
acggccatcaaggacagtagtctagagctgacagctttacaactaagattttatggtgct
tcgattatcagtgaatttgacgaaattgtgacgcatgtcgtatttgatgaaagggatttg
acaagattacccgaactacgtcaaataatgagaagccgtcagcaaaagcaccattttgta
actcaggactgggttacacaatctatagagaaaggccaattgttgcaagaacgaccattt
gctccagtaccttctgtatag
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