Allochromatium tepidum: Atep_06230
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Entry
Atep_06230 CDS
T07447
Symbol
nth_1
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
atep
Allochromatium tepidum
Pathway
atep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Atep_06230 (nth_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atep03400
]
Atep_06230 (nth_1)
Enzymes [BR:
atep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Atep_06230 (nth_1)
DNA repair and recombination proteins [BR:
atep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Atep_06230 (nth_1)
Prokaryotic type
Atep_06230 (nth_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BCU05946
LinkDB
All DBs
Position
complement(669034..669714)
Genome browser
AA seq
226 aa
AA seq
DB search
MMTHQTTVPHTMQPMNAEKRHRIFARLRDANPDPRTELVYRTPFELLIAVMLSAQATDRS
VNQATAGLFACADTPEAILALGEDGLKSHIRTIGLFNTKARHILQTCALLIERHDGAVPR
DRAALEALPGVGRKTANVILNTAFGEPTMAVDTHIFRVANRTGLAPGKTPAAVEQGLLDR
VPDEFLQDAHHWLILHGRYVCTARKPRCPECLIADLCDYPDKTPSN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgcatcaaacgacagtcccgcatacaatgcaacccatgaatgccgaaaaacgc
catcgaatcttcgcccgtctgcgcgacgccaatccggatcccagaaccgagctggtctat
cgcacgcccttcgagctgctgatcgccgtgatgctctcggcccaggccaccgacaggagc
gtcaaccaggccacggccggactcttcgcgtgcgccgacacgcccgaggcgatcctggcg
ctcggcgaggacggactcaagtcccacatccgaaccatcggtctgttcaacaccaaggcg
cgccacatcctccagacctgcgcgctcctgatcgagcgtcacgacggcgcggttccgcgc
gatcgggcggccctggaggcactgcccggcgtcggccgcaagaccgccaacgtcatcctc
aataccgccttcggcgagccgaccatggcggtcgacacccatatcttccgggtcgccaat
cgcaccggactggcgccgggcaagacgccggcggcggtcgagcaggggcttctggatcgg
gtgccggacgagttcctgcaagatgcccatcactggctgatcctgcacggacgctatgtc
tgcaccgcgcgcaaaccgcgctgtcctgagtgcctcatcgccgatctgtgcgactatccc
gacaagaccccatccaactga
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