Agrobacterium tumefaciens Ach5: Ach5_19740
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Entry
Ach5_19740 CDS
T03816
Symbol
lpxC
Name
(GenBank) UDP-3-0-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00540
Lipopolysaccharide biosynthesis
atf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Ach5_19740 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
atf01005
]
Ach5_19740 (lpxC)
Enzymes [BR:
atf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Ach5_19740 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
atf01005
]
Lipid A
Ach5_19740 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AKC07750
UniProt:
A0A1B9TSS8
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All DBs
Position
circular:complement(2011863..2012819)
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AA seq
318 aa
AA seq
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MTIGLLGFQTTIANAVQLKGIGVHSGNPASMTFQPAEAGTGIVFQRLHENGSVTELKAVS
SNVGNTDLCTVLGRSLSQSVATVEHVMAAIYAMGLDNLVVEVDGPEVPIMDGSSAPFIDA
IESAGIKNLGVKRRYIRVIKPVRIDSGASWAEFRPYDGTRFEVDIDFDTPLIGKQSWKGD
LTADTFKNELSRARTFGFMRDVERLWAAGYALGSSLENSVVISDDNSVINMEGLRYAKDE
FVRHKTLDAVGDLALAGAQFIGCYRSYRGGHKVNANALKALLSDRSAYEIVEAPAARNQV
RAREFVPVNMPEFAPWSA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgactatcggactgctcggatttcagacgactatcgcaaatgctgttcagctcaagggc
attggcgtgcattccggcaatccggcttcgatgacgttccagcccgcagaagcaggaacg
ggcatcgtgtttcagcgccttcatgaaaatggcagcgtaaccgagttgaaggcggtgtct
tccaatgtcggcaataccgatctgtgcaccgtgctcggccgctcgctatcccagtcagtg
gcaacggtcgagcacgtcatggctgccatctacgccatgggcctcgataacctcgtcgtt
gaggtcgacggtccggaagtgccgatcatggacggcagctctgcgccatttatcgatgcg
atcgaatcggctggcatcaagaaccttggtgtgaagcgccgctatatccgcgtcatcaag
ccggtgcgcatcgattcgggtgcgtcctgggcggagttccgcccttacgacggcacgcgg
ttcgaggtcgatatcgacttcgacacgccgctaatcggcaagcagtcctggaagggcgac
ctgacggcggatacgttcaagaacgagctttcgcgcgcccgcaccttcggcttcatgcgt
gacgtggagcgcctgtgggctgctggttacgcactcggctcctcgcttgaaaactctgtt
gtcatctccgatgacaacagcgtcatcaacatggagggcctgcgttatgccaaggacgaa
ttcgttcgccataagacgctggacgccgtgggcgacctggcacttgccggtgcgcagttc
atcggttgctatcgctcctatcgcggcggccacaaggtcaatgccaacgcgctgaaggct
ttgctgagcgaccgctcggcctatgagatcgtggaggctccggccgcccgcaaccaggta
cgtgcccgcgaattcgttccggtcaacatgccggaatttgcaccctggtccgcttga
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