Agrobacterium tumefaciens Ach5: Ach5_25210
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Entry
Ach5_25210 CDS
T03816
Symbol
sucA
Name
(GenBank) oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00020
Citrate cycle (TCA cycle)
atf00785
Lipoic acid metabolism
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
atf01200
Carbon metabolism
atf01210
2-Oxocarboxylic acid metabolism
Module
atf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
atf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ach5_25210 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Ach5_25210 (sucA)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Ach5_25210 (sucA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
SHOCT_2
Motif
Other DBs
NCBI-ProteinID:
AKC08296
UniProt:
A0A1B9TCI0
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All DBs
Position
circular:complement(2611401..2614397)
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AA seq
998 aa
AA seq
DB search
MARQEANEQFQITSFLDGANAAYIEQLYARYEEDPSSVSPEWQSFFKALSDNPEDVKKAA
KGASWKRANWPIPANGDLVSALDGNWATVEKAIEKKVQAKAEAKSADTGKAVSPAEVLQA
TRDSVRAIMMIRAYRMRGHLHAKLDPLGIASAVEDYNELSPKSYGFEESDYDRKIFIDNV
LGLEYATVREMVDILERTYCSTLGVEFMHMSNPEEKGWIQERIEGPDKGVDFTPEGKKAI
LSKLVEAEGYEQFLDVRFKGTKRFGLDGGESLIPALEQIIKRGGQDGLEEVVLGMAHRGR
LNVLTNVMGKPHRAVFHEFKGGSFKPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQLAKTWDGDIIPLSERAKVLPLLLHGDAAFAGQGVVAEILG
LSGLRGHRVAGTMHFIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVVY
AAKVATEYRMKFHKPVVIDMFCYRRFGHNEGDEPAFTQPKMYKVIRGHKTVARIYADRLI
AEGLITEGDFEKIKADWRAHLEQEFEAGQSYKPNKADWLDGQWSGLRAADNADEQRRGKT
GVPMKQLKEIGKKLSTIPEGFSAHRTIQRFMENRAQMVETGEGLDWAMAEALAFGSLVVD
GHKIRLSGQDCERGTFSQRHSVLYDQETEERYIPLANLSPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERWLQMCAEDNMQVANVTTPANYFHILRRQMKRDFRKPLILMTPKSLLRHKRA
TSSLAELAGESSFHRLLWDDAEVIKDGPIKLQKDSKIRRVVMCTGKVYYDLLEEREKRGI
DDIYLLRVEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDA
KYQKVRYTGRPAAASPATGLMSKHLAQLAAFLEDALGE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcaagaagcgaacgagcagtttcagatcacgtcgtttctggacggcgcgaat
gcagcctatatcgagcagctctatgcccggtacgaagaggatccctcttccgtgtcgccg
gagtggcagagcttcttcaaggcgttgtccgacaatccggaagacgtgaagaaggcagcc
aagggcgcctcctggaagcgcgccaactggccgatcccggcaaacggcgacctggtatcc
gcgcttgatggcaactgggctacggtcgagaaggccatcgagaagaaggttcaggcgaag
gccgaggccaagagcgccgataccggcaaggccgtcagcccggccgaagtgcttcaggcg
acccgtgacagcgtccgcgccatcatgatgatccgcgcctaccgcatgcgtggccatctg
cacgccaagctcgacccgctcggcatcgccagcgccgttgaggactataacgagctttcg
ccgaagtcctatggcttcgaggaaagcgactacgaccgcaagattttcatcgataacgtc
ctcggtctcgaatacgcgaccgtgcgcgaaatggtcgacattctcgagcgcacctattgc
tcgacgctcggcgtcgaattcatgcatatgtccaacccggaagaaaagggctggatccag
gaacgcatcgaaggtcccgacaagggtgtggacttcacgccggaaggcaagaaggcgatt
ctgtccaagctcgtcgaagccgaaggctacgagcagttcctcgacgtgcgtttcaagggt
acgaagcgtttcggcctcgatggtggtgaatcgctgatcccggcacttgagcagatcatc
aagcgcggcggccaggacggtctggaagaagtcgtgctcggcatggctcaccgcggccgc
ctgaacgttctgaccaacgtgatgggcaagccgcaccgcgccgtgttccacgagttcaag
ggcggttcgttcaagcctgatgacgtcgaaggttccggtgacgtgaagtaccatctcggt
gcctcctcagaccgcgaattcgacggcaacaaggttcacctctcgctgacggccaacccg
tcgcaccttgaaatcgtcaaccctgtcgtcatgggcaaggcccgcgccaagcaggaccag
cttgccaagacatgggacggtgacatcattccgctgtcggaacgcgccaaggtgctgccg
ctcctgttgcacggcgatgccgcttttgcgggtcagggcgtggtagccgaaattctcggc
ctctccggcctgcgcggtcaccgcgttgccggtaccatgcacttcatcatcaacaaccag
atcggcttcacgacgaacccggccttctcgcgctcgtcgccctatccgtccgacgttgcc
aagatgatcgaggcgccgatcttccacgttaacggtgatgatccggaagcggtggtttat
gcggcaaaggttgcaaccgaataccgcatgaagttccacaagcctgtcgtcatcgacatg
ttctgttaccgtcgcttcggccataacgaaggcgacgagcctgcgttcacgcagccgaag
atgtacaaggtcatccgtggccacaagactgtcgcccgcatctatgccgaccgcctgatt
gcggaaggcctgatcaccgaaggcgatttcgagaagatcaaggccgattggcgcgcccat
ctcgagcaggagttcgaggcaggccagtcctacaagccgaacaaggccgactggctggat
ggtcagtggtccggtctgcgcgccgccgacaatgccgatgagcagcgtcgtggcaagacc
ggcgtgccgatgaagcagctgaaggaaatcggcaagaagctgtcgaccattccggaaggc
ttcagcgcacaccgcacaatccagcgcttcatggaaaaccgtgctcagatggtcgagact
ggcgaggggctggactgggcgatggctgaggctctggccttcggttcgctggtcgtagac
ggccacaagatccgtctgtccggtcaggattgcgaacgcggcaccttctcgcagcgccac
tcggttctctatgatcaggagacagaagagcgttacatcccgcttgccaatctttcgccg
acgcaggcccgttacgaagtcatcaactcgatgctttcggaagaagcggttctcggtttc
gaatatggctattcgcttgcccgcccgaatgcactgacgctctgggaagcccagttcggc
gacttcgccaacggcgcccaggtggtgttcgaccagtttatctcttcgggtgaacgcaag
tggctgcgcatgtccggtctcgtctgcctccttccgcatggttatgaaggtcagggtccg
gaacattcgtccgcccgtctggaacgctggttgcagatgtgcgccgaggacaacatgcag
gttgccaacgttacgacgccggctaactacttccatatcctgcgccgccagatgaagcgt
gacttccgcaagccgctcatcctgatgacgccgaagtccctgctgcgtcacaagcgcgcc
acctcgtcgcttgcggagcttgcaggcgaatcctccttccaccgtctcctgtgggacgat
gcggaggtcatcaaggatggtccgatcaagctgcagaaggattcgaagatccgccgcgtc
gtcatgtgcacgggcaaggtctattacgatctgctcgaggagcgtgaaaagcgcggtatt
gacgacatctacctgctgcgtgtcgaacagctctatccgttcccggccaaggcgctcatc
aacgagctttcccgtttccgtaacgcggaaatggtctggtgccaggaagagccgaagaac
atgggtgcgtggtcgttcatcgatccttaccttgaatgggttctggcgcatatcgacgcc
aagtaccagaaggtccgttacacgggccgtccggctgccgcctctccggcgaccggcctg
atgtccaagcatctggcgcagcttgctgcgttcctggaagacgcgctgggagagtga
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