Agrobacterium tumefaciens Ach5: Ach5_25240
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Entry
Ach5_25240 CDS
T03816
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00020
Citrate cycle (TCA cycle)
atf00270
Cysteine and methionine metabolism
atf00620
Pyruvate metabolism
atf00630
Glyoxylate and dicarboxylate metabolism
atf00680
Methane metabolism
atf00710
Carbon fixation by Calvin cycle
atf00720
Other carbon fixation pathways
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
atf01200
Carbon metabolism
Module
atf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
atf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
atf_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ach5_25240 (mdh)
00620 Pyruvate metabolism
Ach5_25240 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
Ach5_25240 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Ach5_25240 (mdh)
00720 Other carbon fixation pathways
Ach5_25240 (mdh)
00680 Methane metabolism
Ach5_25240 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Ach5_25240 (mdh)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
Ach5_25240 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
DUF357
Motif
Other DBs
NCBI-ProteinID:
AKC08299
UniProt:
A0AA86FWV6
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All DBs
Position
circular:complement(2616819..2617781)
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AA seq
320 aa
AA seq
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MARKKIALIGSGMIGGTLAHLASLKELGDIVLFDIADGIPQGKGLDIAQSGPVEGFNAKL
TGASDYAAIEGADVCIVTAGVARKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICIT
NPLDAMVWALQKFSGLPKNKVVGMAGVLDSARFRLFLAEEFNVSVQDVTAFVLGGHGDTM
VPLARYSTVGGIPLTDLVKMGWLTAERLEEIIQRTRDGGAEIVGLLKTGSAYYAPAASAI
EMAESYLKDKKRVLPAAAHLSGQYGVDDMYVGVPTIIGAGGIERIIEIELNKDEEAAFQK
SVGAVAGLCEACINIAPSLK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaaaaagattgcacttattggttctggcatgatcggcggcacgctggcgcat
ctcgccagcctgaaggaactgggcgatatcgtcctcttcgatattgccgacggcatcccg
cagggcaaaggtctggatattgcccagtccggaccggttgaaggtttcaatgccaagctc
actggcgcgtccgactacgctgccatcgaaggcgctgatgtctgcatcgtcaccgcaggc
gtcgcccgcaagcccggcatgagccgcgacgatcttctcggcatcaatctcaaggtcatg
gagcaggtcggcgccggcatcaagaaatatgccccgaacgctttcgtcatctgcatcacc
aacccgctggacgccatggtctgggcgcttcagaagttttccggtcttccgaagaacaag
gtcgtcggcatggccggcgttctcgacagcgctcgcttccgcctgttcctcgccgaagag
ttcaacgtttcggttcaggacgtaacagcattcgttctcggcggccacggcgatacgatg
gtgcctttggcgcgttactccaccgttggcggcattccgctgaccgatctcgtcaagatg
ggctggctcaccgccgagcgtctcgaagagatcatccagcgcacccgcgacggcggtgcg
gaaatcgtcggcctgctgaagaccggctcggcctattacgcgcccgccgcttcggcgatc
gaaatggctgaatcctacctcaaggacaagaagcgcgttctgcccgccgctgcccatctg
tcgggccagtacggcgtggacgatatgtatgtcggcgtgcccaccatcatcggcgccggt
ggtatcgagcgcatcatcgagatcgagctgaacaaggatgaagaagccgccttccagaag
tccgtcggcgctgttgccggtctttgcgaagcctgcatcaacatcgctccgtcgctgaag
taa
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