Agrobacterium tumefaciens Ach5: Ach5_26490
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Entry
Ach5_26490 CDS
T03816
Symbol
gdh
Name
(GenBank) NAD-glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00220
Arginine biosynthesis
atf00250
Alanine, aspartate and glutamate metabolism
atf00430
Taurine and hypotaurine metabolism
atf00910
Nitrogen metabolism
atf01100
Metabolic pathways
atf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Ach5_26490 (gdh)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Ach5_26490 (gdh)
00220 Arginine biosynthesis
Ach5_26490 (gdh)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
Ach5_26490 (gdh)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
Ach5_26490 (gdh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT2
GDH_HM1
GDH_ACT3
GDH_ACT1
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
AKC08424
LinkDB
All DBs
Position
circular:2759267..2764027
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AA seq
1586 aa
AA seq
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MGYRNNPKREKQIEKARQQALAENAPFLDPGILYGRASADDIEYYSAEMLAASAAHSFEA
LSRWTGDAPHISIAQVEGVTPRDIPVTVLTIIGRNMPFLYDSVMGEVTSSYRGLYLAVHP
ILVPDATAQAGYRLAEPDDDPAGNISLIQLHIAPLTQQAATALEERLRFVLAQVQSAYRD
WRPMLSKLDEALDELSKRGSSRRKTERAEAVEFLNWLRNDNFTFLGMRDYTYSGTGKNAK
IERGDGVGLGSLSDPDVRVLRLGKDAVTTTPEILAFLDGPDFLIVTKANVKSIVHRRAYM
DYIGIKRFDEDGNVIGELRIVGLFTATAYTRSVKHIPLLRAKIADVERHFGFDPNSHSGR
ILQNTLEAYPRDDLFQIETDLLIRFIEQIMELSDRPRVRVLARIDRFDRFVSAIIFVPRE
EYNSYVREKIGDYLSKVYDGHISAYYPAFPEGAVARVHFIVGRTEGKTPRIAQDKLEDAV
SDIAARWIDHFVALSEPGAPVLEVDQAYQEAFTPEEAIGDMADILATVKGEPVRIEFYQQ
EGQSAETLSLKIFHRDGHLPLSRRVPLLENLGFNVISERTFDIGVISDGEKRDIVLHDME
LAVAKGVTLDLPQYGQKLEEAFLAAFSGKVDNDNFNRLILACGLTVREVSVLRAYARYLR
QTGIVYSQEHISETLFKYPAISRNIFALFKAGFDPSIDEKKRLKKLAEMHKTIEAALSGV
PNLDEDRTLRRYVNAIDATLRTNYFQKNTDGTPRDLLAFKFDPKHLDGLPDPRPFREIFV
YGTEVEGVHLRFGKVARGGLRWSDRGQDYRTEVLGLVKAQQVKNAVIVPVGAKGGFFPKN
LPVGGSRDEVFNAGREAYKTYIRTLLSITDNIVDDAVVPPADTLRLDGDDPYFVVAADKG
TATFSDTANGLAHDAGFWLDDAFASGGSAGYDHKKMGITARGAWETVKRHFREMDTDIQT
TPFTVAGVGDMSGDVFGNGMLLSEKIRLIAAFDHRDIFIDPDPDTDKSFAERKRLFELPR
SSWQDYDRSTLSKGAMIISRSEKSVTLTPEAVAAIGIDKSVATPFEIMTAILKAPTDLLW
FGGIGTYIKAAVETNAEVGDRANDPIRVNATELRAKVIGEGANLGITQKGRIAYALAGGR
CNSDAIDNSAGVNSSDVEVNIKIALASAVNSGRLTMPKRNQLLASMTPEVAQLVLRNNYL
QSLAISLTERLGLANREELGRLMSALEATGQLNRKVETLPSNAELSERYATGKPLTRPEI
GVLLSYAKLTLFDALVASPLPDEPYLQHLLADYFPAKMQKNYADDIKAHRLHREIVATAL
ANAVVNRGGPGFVQKLADASGLLSADVVKAAVIVEDGFGLKRLWSEVDALDGKIGGEVQN
GLYATITRIYSDASRLYLQTGSVGAGTSDMATEIERLKTAIKTLSPAAAKYRRELGVTEI
DGVPSGLLEELDTLSLLVYVPEIMRIAENAGTTLARAAESYATVSSTFRVARLLDASQRI
TPADHYESLALLRSQDQIALSRRRIVISALTEYAKEKDPVQAWYAADRVRVNRIVSELGA
LSESGDTNLARLTVAAGLLGDIVQTR
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgggctacagaaataatccaaaacgcgaaaaacagatcgaaaaagcacgacagcaggca
cttgccgaaaacgcgccatttcttgatccgggtatactctatggaagagcaagcgccgac
gacatagaatattattccgccgaaatgttggccgcaagcgcggcgcacagtttcgaggct
ctttcgcgctggactggagacgcgccccatatcagcatcgcccaggtggagggcgtcacc
ccgcgggatattccggtaacggttctgacgattatcggccgcaatatgcccttcctctac
gattccgtcatgggtgaggtcacaagcagctatcgcggcctctatctcgcggtccacccc
attctggtgccggatgcaacggcgcaggcgggttatcgccttgcggagcctgatgacgat
cccgccgggaatatcagcctcattcagctgcacatcgccccactgacccagcaggccgca
acggcgctggaagaaagattgcgtttcgtgctggcgcaggttcagtccgcctatagggac
tggcggcccatgctgtcgaaactcgacgaagccctagacgaattgtccaaacgcggctcc
tcgcggcgcaagaccgagcgcgcggaagccgtcgagtttctcaactggcttcgcaacgac
aatttcaccttcctcggcatgcgcgattacacctattccggaacgggaaagaacgcgaaa
atcgaacgcggtgacggcgtcggcctcggcagcttgagcgatccggatgtgcgcgtgctg
cgccttggcaaggacgccgtgacaacgacgcctgaaatcctcgccttcctcgacggtccg
gatttcctcatcgtcaccaaggcaaatgtgaagtccatcgtgcatcgccgcgcttatatg
gattatatcggcatcaagcgcttcgacgaggatggcaatgtcatcggtgaattgcgcatc
gtcggccttttcaccgccaccgcctatacgcgttcggtaaagcacatcccgctgctacgt
gccaaaattgcggatgtcgagcggcatttcggttttgatccgaacagccactccggccgc
attctgcagaacacgctggaagcctatccgcgcgacgatctcttccagatcgaaacggat
cttctgatccgcttcatcgagcaaatcatggaactgagcgaccggccacgcgtgcgcgtt
ctcgcacgtatcgaccgtttcgaccgcttcgtctcggccatcatcttcgtgccgcgcgag
gaatacaattcctatgtgcgcgagaagatcggcgactatcttagcaaggtctatgacggg
catatttccgcctattaccctgccttccccgaaggcgctgtcgcccgcgtccatttcatc
gtcggccgcacggagggcaagacgccgcgtatcgcgcaggacaagctggaggatgccgtc
agcgatatcgcagcacgctggatagaccatttcgttgccctttccgaacctggtgcgccg
gtgctggaggtggatcaggcctatcaggaagccttcacgccggaagaagcgattggcgat
atggcggatattctggccactgtgaagggtgagccggtccgcatcgaattttaccagcag
gaaggccagtcagctgagacgctgtcgctgaagatcttccatcgggatggccatctgcca
ctgtcgcgccgtgtgccgctgctggaaaacctcggtttcaacgtcatcagtgagcgcacc
ttcgacatcggtgtcatctcggatggcgaaaagcgcgacatcgtgctgcatgatatggaa
ctcgccgtcgccaagggcgtgacgctcgatctgccgcaatacggacagaaactcgaagaa
gcattccttgctgccttctcgggcaaggtcgataatgacaactttaaccggctgatcctc
gcctgcggccttaccgtgcgcgaagtgtccgtcctgcgcgcttatgcccgttatctgcgc
cagaccggaatcgtttattcccaggagcatatttccgaaacgctctttaaatatccggcc
atttcacggaatattttcgcgctgttcaaggctggcttcgatccgtccatcgacgagaag
aagcggctgaagaaactggcagagatgcacaagacaatcgaagctgcattgagcggtgtt
ccaaatctcgatgaagaccgcaccttgcggcgttatgtcaacgccatcgacgccacgctt
cgtaccaactacttccagaaaaacaccgatggcacgccgcgtgacctgttggcgttcaag
ttcgatcccaaacatctggacggcctgcccgatccacgtcctttccgcgaaatcttcgtc
tacggaacggaagtagaaggcgtgcatctgcgcttcggcaaagtggcgcgcggcggtctg
cgctggtcggatcgcggccaggattaccgcacggaagtgctcggtctcgtcaaggcgcag
caggtcaagaatgcggtgatcgttcccgttggcgccaagggcggctttttcccgaagaac
ctgcctgttggcggctcccgcgacgaggtcttcaatgcaggccgtgaagcctacaagacc
tatatccgcactcttctgtccatcaccgacaatatcgtcgacgacgccgtggtaccgccg
gccgatacgttgcggcttgatggtgacgatccctatttcgtcgtcgccgccgataagggg
accgcgacattctccgatacggcaaacggcctcgcccacgacgccggcttctggctggac
gatgccttcgcatcgggtggttccgccggttacgaccacaagaagatgggcatcaccgcg
cgcggtgcctgggaaacggtaaagcgtcatttccgcgaaatggacaccgacatccagacc
acgcccttcacagtggcaggtgtcggcgacatgtccggcgacgttttcggtaacggcatg
ttgctgtcggaaaagatcaggctgatcgcagctttcgatcatcgcgacatcttcatcgat
ccggatcccgataccgacaaatccttcgctgagcgcaagcggcttttcgaattgccacgc
tcaagctggcaggattacgaccgttcaacgctctctaaaggcgcaatgatcatctcgcgt
tccgaaaaatcggtgacgctgacgccggaagccgtcgctgccatcggcatcgacaaatcc
gtcgctacacccttcgagatcatgaccgccattctgaaggcgccaaccgatcttctgtgg
ttcggcggcatcggcacctatatcaaggcggcggtggaaaccaacgccgaggtgggtgac
agggcgaacgaccccatccgcgtcaacgccaccgagctgcgcgccaaggtcatcggcgaa
ggcgccaatctcggcattacccagaagggccgtatcgcctatgcgctggcgggtgggcgt
tgcaattccgacgccatcgacaactcggccggcgtgaattcctccgacgtcgaggtcaac
atcaagatcgccctcgcctccgcagtcaatagcggtcgcctgacgatgccgaagcgcaac
cagcttcttgcctccatgacgccggaagtggcgcagctcgtgctgcgcaacaactacctg
caatcgctggcaatctcgctgaccgagcggcttgggcttgcaaaccgggaagaactcggc
cgcctgatgagcgcgctggaggcaaccggccaactgaaccgcaaggtcgaaaccttgccg
agcaatgccgagctcagcgaaagatatgccaccggcaagccgctgacccggccggaaatc
ggcgtgctgctttcctatgccaagctgacactgttcgacgctctggtggcaagcccgctg
cccgacgaaccctatctccagcatctgctcgcagactatttcccggccaagatgcagaag
aactatgcagacgatatcaaggcgcatcgcctgcaccgcgaaatcgttgcgacagcgctc
gccaatgccgtggtaaaccgcggcggccctggcttcgtgcagaaactcgccgatgcgagc
ggcctcctgtcggcggatgtcgtcaaggcagcggtgatcgtggaggacggtttcggcctc
aaacgtctttggagcgaggtcgacgcgcttgacggaaagatcggcggagaagtccagaac
ggactttatgccacgatcacccgcatctactccgatgcaagcaggctttatttgcaaacc
gggagcgtgggcgctggaacgagcgacatggcaaccgaaatcgagcgcctgaaaactgcc
atcaagacgctatcgccggcagcggcgaaatatcgccgcgagcttggcgtcacggaaatc
gacggtgttccctctggccttctggaggagctggatacgctttccctgctggtctatgtg
ccagagatcatgcgtatcgccgaaaatgcgggcacgacgcttgcccgcgccgccgaaagc
tacgccacggtctcctcgaccttccgtgtcgcgcggctgctggatgccagccagcgcatc
acgccggcagatcactacgagagcctggctcttctgcgcagccaggaccagatcgccttg
tcgagacgccggatcgtcatctcggccctcaccgagtatgcgaaggaaaaggacccggtt
caggcctggtatgcggccgaccgcgtgcgcgtcaatcgcatcgtctcggaactcggtgca
ctgagcgaaagcggcgataccaacctcgcccgcctgacagtggcggcggggctgcttggt
gatatcgttcagacgcgctga
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